RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TRGV1A0A0A0MS02 117 aa12.46□□□□□ -0.41
MSH6-207ENST00000456246 SPINK4O60575 86 aa12.46□□□□□ -0.41
MSH6-207ENST00000456246 MBP02144 154 aa12.46□□□□□ -0.41
MSH6-207ENST00000456246 HOXA5P20719 270 aa12.46□□□□□ -0.41
MSH6-207ENST00000456246 RAB2AP61019 212 aa12.46□□□□□ -0.41
MSH6-207ENST00000456246 ZNF415Q09FC8 603 aa12.46□□□□□ -0.41
MSH6-207ENST00000456246 A0A1B0GVY2 172 aa12.45□□□□□ -0.42
MSH6-207ENST00000456246 CDC34P49427 236 aaPredicted RBP12.45□□□□□ -0.42
MSH6-207ENST00000456246 SERF2P84101 59 aa12.45□□□□□ -0.42
MSH6-207ENST00000456246 Q6AWC8 147 aa12.45□□□□□ -0.42
MSH6-207ENST00000456246 LINC00588Q9Y4M8 146 aa12.45□□□□□ -0.42
MSH6-207ENST00000456246 NBDYA0A0U1RRE5 68 aa12.44□□□□□ -0.42
MSH6-207ENST00000456246 PGPA6NDG6 321 aa12.44□□□□□ -0.42
MSH6-207ENST00000456246 SSX7Q7RTT5 188 aa12.44□□□□□ -0.42
MSH6-207ENST00000456246 HSD17B11Q8NBQ5 300 aa12.44□□□□□ -0.42
MSH6-207ENST00000456246 INO80EQ8NBZ0 244 aaPredicted RBP12.44□□□□□ -0.42
MSH6-207ENST00000456246 HYLS1Q96M11 299 aa12.44□□□□□ -0.42
MSH6-207ENST00000456246 KLF12Q9Y4X4 402 aa12.44□□□□□ -0.42
MSH6-207ENST00000456246 MUC4Q99102 2169 aa12.43□□□□□ -0.42
MSH6-207ENST00000456246 A0A0J9YY99 117 aa12.43□□□□□ -0.42
MSH6-207ENST00000456246 SERTM2A0A1B0GWG4 89 aa12.43□□□□□ -0.42
MSH6-207ENST00000456246 ST6GAL2Q96JF0 529 aa12.43□□□□□ -0.42
MSH6-207ENST00000456246 TRGV11A0A075B6L2 103 aa12.42□□□□□ -0.42
MSH6-207ENST00000456246 ARL14EPLP0DKL9 152 aa12.42□□□□□ -0.42
MSH6-207ENST00000456246 SLAQ13239 276 aa12.42□□□□□ -0.42
MSH6-207ENST00000456246 TTC32Q5I0X7 151 aa12.42□□□□□ -0.42
MSH6-207ENST00000456246 FAM159AQ6UWV7 190 aa12.42□□□□□ -0.42
MSH6-207ENST00000456246 UPK3BQ9BT76 320 aa12.42□□□□□ -0.42
MSH6-207ENST00000456246 TP53TG3Q9ULZ0 132 aa12.42□□□□□ -0.42
MSH6-207ENST00000456246 DNAH2Q9P225 4427 aa12.42□□□□□ -0.42
MSH6-207ENST00000456246 STAG3L2P0CL84 134 aa12.41□□□□□ -0.42
MSH6-207ENST00000456246 STAG3L3P0CL85 134 aa12.41□□□□□ -0.42
MSH6-207ENST00000456246 ATP6V0CP27449 155 aa12.41□□□□□ -0.42
MSH6-207ENST00000456246 GOLT1AQ6ZVE7 132 aa12.41□□□□□ -0.42
MSH6-207ENST00000456246 SPXQ9BT56 116 aa12.41□□□□□ -0.42
MSH6-207ENST00000456246 RPH3ALQ9UNE2 315 aa12.41□□□□□ -0.42
MSH6-207ENST00000456246 FAT2Q9NYQ8 4349 aa12.41□□□□□ -0.42
MSH6-207ENST00000456246 BORCS7-ASMTA0A0B4J1R7 106 aa12.4□□□□□ -0.42
MSH6-207ENST00000456246 EIF3GO75821 320 aaKnown RBP eCLIP12.4□□□□□ -0.42
MSH6-207ENST00000456246 RGS21Q2M5E4 152 aa12.4□□□□□ -0.42
MSH6-207ENST00000456246 TDRG1Q3Y452 100 aa12.4□□□□□ -0.42
MSH6-207ENST00000456246 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
MSH6-207ENST00000456246 Q9H8V8 135 aa12.4□□□□□ -0.42
MSH6-207ENST00000456246 MRPL16Q9NX20 251 aaKnown RBP12.4□□□□□ -0.42
MSH6-207ENST00000456246 TNFSF18Q9UNG2 199 aa12.4□□□□□ -0.42
MSH6-207ENST00000456246 MRPS16Q9Y3D3 137 aaKnown RBP12.4□□□□□ -0.42
MSH6-207ENST00000456246 TRAV21A0A0B4J279 112 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 K7EQM0 130 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 HMGB3O15347 200 aaKnown RBP12.39□□□□□ -0.43
MSH6-207ENST00000456246 Q6ZQT7 251 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 C6orf223Q8N319 242 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 C5orf17Q8NAS9 161 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 SUN5Q8TC36 379 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 RAB24Q969Q5 203 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 VSIG2Q96IQ7 327 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 NDFIP1Q9BT67 221 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 ACTR3CQ9C0K3 210 aaPredicted RBP12.39□□□□□ -0.43
MSH6-207ENST00000456246 TMEM167BQ9NRX6 74 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 PRO0255Q9UI72 69 aa12.39□□□□□ -0.43
MSH6-207ENST00000456246 FXYD6-FXYD2A0A087WZ82 144 aa12.38□□□□□ -0.43
MSH6-207ENST00000456246 A0A096LPF7 62 aa12.38□□□□□ -0.43
MSH6-207ENST00000456246 CXorf1O96002 111 aa12.38□□□□□ -0.43
MSH6-207ENST00000456246 GCHFRP30047 84 aa12.38□□□□□ -0.43
MSH6-207ENST00000456246 Q5BKY6 102 aa12.38□□□□□ -0.43
MSH6-207ENST00000456246 OR2T35Q8NGX2 323 aa12.38□□□□□ -0.43
MSH6-207ENST00000456246 TREM1Q9NP99 234 aa12.38□□□□□ -0.43
MSH6-207ENST00000456246 ICOSQ9Y6W8 199 aa12.38□□□□□ -0.43
MSH6-207ENST00000456246 DNAH17Q9UFH2 4485 aa12.37□□□□□ -0.43
MSH6-207ENST00000456246 A0A1W2PPQ1 181 aa12.37□□□□□ -0.43
MSH6-207ENST00000456246 RNF222A6NCQ9 220 aa12.37□□□□□ -0.43
MSH6-207ENST00000456246 PAX4O43316 350 aa12.37□□□□□ -0.43
MSH6-207ENST00000456246 BTF3P20290 206 aaKnown RBP12.37□□□□□ -0.43
MSH6-207ENST00000456246 TMEM183BQ1AE95 376 aa12.37□□□□□ -0.43
MSH6-207ENST00000456246 ESRGQ1W209 222 aa12.37□□□□□ -0.43
MSH6-207ENST00000456246 TMEM183AQ8IXX5 376 aa12.37□□□□□ -0.43
MSH6-207ENST00000456246 KCNS1Q96KK3 526 aa12.37□□□□□ -0.43
MSH6-207ENST00000456246 FBLL1A6NHQ2 334 aaKnown RBP12.36□□□□□ -0.43
MSH6-207ENST00000456246 GNG5P63218 68 aa12.36□□□□□ -0.43
MSH6-207ENST00000456246 RASL10AQ92737 203 aa12.36□□□□□ -0.43
MSH6-207ENST00000456246 SH3BGRL3Q9H299 93 aa12.36□□□□□ -0.43
MSH6-207ENST00000456246 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
MSH6-207ENST00000456246 NAGKQ9UJ70 344 aa12.36□□□□□ -0.43
MSH6-207ENST00000456246 TRAV8-1A0A0A6YYK1 113 aa12.35□□□□□ -0.43
MSH6-207ENST00000456246 IGHV3-53P01767 116 aa12.35□□□□□ -0.43
MSH6-207ENST00000456246 TCRAP04437 139 aa12.35□□□□□ -0.43
MSH6-207ENST00000456246 RPL7L1Q6DKI1 246 aaKnown RBP12.35□□□□□ -0.43
MSH6-207ENST00000456246 IQCF2Q8IXL9 164 aa12.35□□□□□ -0.43
MSH6-207ENST00000456246 SDF2L1Q9HCN8 221 aa12.35□□□□□ -0.43
MSH6-207ENST00000456246 HHLA3Q9XRX5 114 aa12.35□□□□□ -0.43
MSH6-207ENST00000456246 PKHD1P08F94 4074 aa12.34□□□□□ -0.43
MSH6-207ENST00000456246 TRGV4A0A0C4DH28 118 aa12.34□□□□□ -0.43
MSH6-207ENST00000456246 F6UZH7 168 aa12.34□□□□□ -0.43
MSH6-207ENST00000456246 TAAR5O14804 337 aa12.34□□□□□ -0.43
MSH6-207ENST00000456246 CRYBA4P53673 196 aa12.34□□□□□ -0.43
MSH6-207ENST00000456246 MRPL23Q16540 153 aaKnown RBP12.34□□□□□ -0.43
MSH6-207ENST00000456246 M0R2P5 195 aa12.33□□□□□ -0.44
MSH6-207ENST00000456246 MED14OSP0DP75 135 aa12.33□□□□□ -0.44
MSH6-207ENST00000456246 FHL2Q14192 279 aa12.33□□□□□ -0.44
MSH6-207ENST00000456246 ZFP69Q49AA0 526 aa12.33□□□□□ -0.44
MSH6-207ENST00000456246 CYB561D1Q8N8Q1 229 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms