RNA–Protein interactions for RNA: ENST00000454398.1

HLA-DPA3-207, Transcript of major histocompatibility complex, class II, DP alpha 3 (pseudogene), humanhuman

BASIC

Gene HLA-DPA3, Length 229 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA3-207ENST00000454398 OR10P1Q8NGE3 313 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PCNPQ8WW12 178 aaKnown RBP4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 SMIM8Q96KF7 97 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 ODF3Q96PU9 254 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 AGPAT4-IT1Q9H0P7 198 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 PGPEP1Q9NXJ5 209 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 RABL2AQ9UBK7 228 aaPredicted RBP4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 NAGKQ9UJ70 344 aa4.03□□□□□ -1.76
HLA-DPA3-207ENST00000454398 TRGV4A0A0C4DH28 118 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IGSF23A1L1A6 192 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 FAM24AA6NFZ4 105 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 INMT-MINDY4F8WBC2 141 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 K7EQD1 137 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 LYRM1O43325 122 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 NDUFB6O95139 128 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SLC25A5P05141 298 aaKnown RBP4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 GPX1P07203 203 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 OR10J4P0C629 311 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SRIP30626 198 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 S100A10P60903 97 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 BAXQ07812 192 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 NEGR1Q7Z3B1 354 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 LINC00528Q8N1L1 170 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 C9orf62Q8N4C0 152 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 THAP6Q8TBB0 222 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PHYHIPLQ96FC7 376 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 FAM19A4Q96LR4 140 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SLC25A21Q9BQT8 299 aaPredicted RBP4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SLC25A2Q9BXI2 301 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 MED28Q9H204 178 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 NPVFQ9HCQ7 196 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PRO0255Q9UI72 69 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 HHLA3Q9XRX5 114 aa4.02□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IGHV1OR15-1A0A075B7D0 117 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PIGBOS1A0A0B4J2F0 54 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 LINC00862A6NCI5 91 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 LRCOL1A6NCL2 159 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PCP4L1A6NKN8 68 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 F6UZH7 168 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 FAM229AH3BQW9 127 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PLA2G10O15496 165 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PSCAO43653 123 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 MPDU1O75352 247 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IGHV3-30P01768 117 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IGHV3-33P01772 117 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IGHV3-30-3P0DP02 117 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IGHV3-30-5P0DP03 117 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 FGF7P21781 194 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 RAB14P61106 215 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 MRPL23Q16540 153 aaKnown RBP4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TMEM183BQ1AE95 376 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 ANXA2RQ3ZCQ2 193 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 MIR17HGQ75NE6 70 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 NFE4Q86UQ8 179 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TMEM183AQ8IXX5 376 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 NHLRC2Q8NBF2 726 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 HYLS1Q96M11 299 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SEC22CQ9BRL7 303 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SLC39A9Q9NUM3 307 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 UQCC1Q9NVA1 299 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 RPH3ALQ9UNE2 315 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 WDR83OSQ9Y284 106 aa4.01□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IGLV2-33A0A075B6J2 118 aaPredicted RBP4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TRAV6A0A075B6T7 132 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IGHV3-73A0A0B4J1V6 119 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 FNDC10F2Z333 226 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 L7N2F9 121 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IFNA7P01567 189 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 CRISP2P16562 243 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 EVI2AP22794 236 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PPT1P50897 306 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 VAMP2P63027 116 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 IBA57Q5T440 356 aaKnown RBP4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TMEM78Q5T7P6 136 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 S100A7AQ86SG5 101 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 Q8N814 137 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 MRPL53Q96EL3 112 aaKnown RBP4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 FAM167A-AS1Q96KT0 104 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SLC25A31Q9H0C2 315 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 C20orf85Q9H1P6 137 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 C11orf1Q9H5F2 150 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 DNAJC4Q9NNZ3 241 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TIMM9Q9Y5J7 89 aa4□□□□□ -1.77
HLA-DPA3-207ENST00000454398 C5orf51A6NDU8 294 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SSNA1O43805 119 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 ZNF253O75346 499 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 KRTAP10-4P60372 401 aaPredicted RBP3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 LRP2P98164 4655 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 GUK1Q16774 197 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 CLLU1Q5K131 121 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 Q6ZRG5 221 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 C9orf47Q6ZRZ4 202 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SCXQ7RTU7 201 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 OR1L4Q8NGR5 311 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 SVIPQ8NHG7 77 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 MITD1Q8WV92 249 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 DNAJC30Q96LL9 226 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 PFDN5Q99471 154 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 TMEM70Q9BUB7 260 aa3.99□□□□□ -1.77
HLA-DPA3-207ENST00000454398 NPCDR1Q9BY65 106 aa3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms