RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 PQLC2Q6ZP29 291 aa8.12□□□□□ -1.11
HERC3-207ENST00000452979 LRRC20Q8TCA0 184 aa8.12□□□□□ -1.11
HERC3-207ENST00000452979 MBD3L1Q8WWY6 194 aa8.12□□□□□ -1.11
HERC3-207ENST00000452979 SAT2Q96F10 170 aaPredicted RBP8.12□□□□□ -1.11
HERC3-207ENST00000452979 TMPRSS5Q9H3S3 457 aa8.12□□□□□ -1.11
HERC3-207ENST00000452979 Q9H8V8 135 aa8.12□□□□□ -1.11
HERC3-207ENST00000452979 CXorf1O96002 111 aa8.11□□□□□ -1.11
HERC3-207ENST00000452979 TAS2R60P59551 318 aa8.11□□□□□ -1.11
HERC3-207ENST00000452979 TMEM256Q8N2U0 113 aa8.11□□□□□ -1.11
HERC3-207ENST00000452979 RNF182Q8N6D2 247 aa8.11□□□□□ -1.11
HERC3-207ENST00000452979 SUN5Q8TC36 379 aa8.11□□□□□ -1.11
HERC3-207ENST00000452979 BLNKQ8WV28 456 aa8.11□□□□□ -1.11
HERC3-207ENST00000452979 PCNPQ8WW12 178 aaKnown RBP8.11□□□□□ -1.11
HERC3-207ENST00000452979 ZNF331Q9NQX6 463 aaPredicted RBP8.11□□□□□ -1.11
HERC3-207ENST00000452979 TRAV12-2A0A075B6T6 113 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 TRAV1-1A0A0B4J248 108 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 ZNF253O75346 499 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 H2AFB1P0C5Y9 115 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 NBEAP1P0C6P0 100 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 PRB4P10163 310 aaPredicted RBP8.1□□□□□ -1.11
HERC3-207ENST00000452979 CCL20P78556 96 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 GUK1Q16774 197 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 IQCF2Q8IXL9 164 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 SFT2D1Q8WV19 159 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 C16orf74Q96GX8 76 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 LINC01587Q99440 93 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 UPK3BQ9BT76 320 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 KRTAP1-5Q9BYS1 174 aa8.1□□□□□ -1.11
HERC3-207ENST00000452979 TIMM8BQ9Y5J9 83 aaPredicted RBP8.1□□□□□ -1.11
HERC3-207ENST00000452979 A0A1W2PPQ1 181 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 IFNA7P01567 189 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 KRTAP10-2P60368 255 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 PDE6HQ13956 83 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 TTC32Q5I0X7 151 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 ZNF493Q6ZR52 646 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 EXOC3-AS1Q8N2X6 119 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 LYPD6BQ8NI32 183 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 SLC50A1Q9BRV3 221 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 Q9H3A6 140 aa8.09□□□□□ -1.11
HERC3-207ENST00000452979 GGTLC3B5MD39 225 aa8.08□□□□□ -1.12
HERC3-207ENST00000452979 M0R3E3 92 aa8.08□□□□□ -1.12
HERC3-207ENST00000452979 NMBP08949 121 aa8.08□□□□□ -1.12
HERC3-207ENST00000452979 LINC00612Q8N6U2 182 aa8.08□□□□□ -1.12
HERC3-207ENST00000452979 OR8A1Q8NGG7 326 aa8.08□□□□□ -1.12
HERC3-207ENST00000452979 RNASE8Q8TDE3 154 aaKnown RBP8.08□□□□□ -1.12
HERC3-207ENST00000452979 TMEM167BQ9NRX6 74 aa8.08□□□□□ -1.12
HERC3-207ENST00000452979 PPP1R14DQ9NXH3 145 aa8.08□□□□□ -1.12
HERC3-207ENST00000452979 FAM74A7A6NL05 159 aa8.07□□□□□ -1.12
HERC3-207ENST00000452979 PRAC2D3DTV9 90 aa8.07□□□□□ -1.12
HERC3-207ENST00000452979 H3BNG1 76 aa8.07□□□□□ -1.12
HERC3-207ENST00000452979 UBE2G2P60604 165 aa8.07□□□□□ -1.12
HERC3-207ENST00000452979 RANP62826 216 aaKnown RBP8.07□□□□□ -1.12
HERC3-207ENST00000452979 ESRGQ1W209 222 aa8.07□□□□□ -1.12
HERC3-207ENST00000452979 ZNF738Q8NE65 137 aa8.07□□□□□ -1.12
HERC3-207ENST00000452979 RXFP4Q8TDU9 374 aa8.07□□□□□ -1.12
HERC3-207ENST00000452979 TMEM263Q8WUH6 116 aaKnown RBP8.07□□□□□ -1.12
HERC3-207ENST00000452979 NOP10Q9NPE3 64 aaKnown RBP8.07□□□□□ -1.12
HERC3-207ENST00000452979 TRAV26-1A0A087WT03 109 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 HTN1P15515 57 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 CDKN1BP46527 198 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 BLOC1S1P78537 153 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 HIST1H1AQ02539 215 aaPredicted RBP8.06□□□□□ -1.12
HERC3-207ENST00000452979 OR5I1Q13606 314 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 ICAM4Q14773 271 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 PSG3Q16557 428 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 OR10J6PQ8NGY7 276 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 MRPL53Q96EL3 112 aaKnown RBP8.06□□□□□ -1.12
HERC3-207ENST00000452979 C20orf144Q9BQM9 153 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 OTORQ9NRC9 128 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 GNG13Q9P2W3 67 aa8.06□□□□□ -1.12
HERC3-207ENST00000452979 A0A1W2PRE2 83 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 EPM2AB3EWF7 344 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 TEX46H3BTG2 121 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 H7BYZ3 331 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 RGS13O14921 159 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 PAGE4O60829 102 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 HOXA5P20719 270 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 GNG5P63218 68 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 LYPD1Q8N2G4 141 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 RPUSD4Q96CM3 377 aaKnown RBP8.05□□□□□ -1.12
HERC3-207ENST00000452979 AAMDCQ9H7C9 122 aa8.05□□□□□ -1.12
HERC3-207ENST00000452979 MRPS16Q9Y3D3 137 aaKnown RBP8.05□□□□□ -1.12
HERC3-207ENST00000452979 FAT1Q14517 4588 aa8.04□□□□□ -1.12
HERC3-207ENST00000452979 IGKV2-40A0A087WW87 121 aaPredicted RBP8.04□□□□□ -1.12
HERC3-207ENST00000452979 PGPA6NDG6 321 aa8.04□□□□□ -1.12
HERC3-207ENST00000452979 IGKV2D-40P01614 121 aaPredicted RBP8.04□□□□□ -1.12
HERC3-207ENST00000452979 CCDC28AQ8IWP9 274 aa8.04□□□□□ -1.12
HERC3-207ENST00000452979 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
HERC3-207ENST00000452979 ARL2-SNX15V9GYD0 113 aa8.04□□□□□ -1.12
HERC3-207ENST00000452979 VPS13BQ7Z7G8 4022 aa8.03□□□□□ -1.12
HERC3-207ENST00000452979 BCL2P10415 239 aa8.03□□□□□ -1.12
HERC3-207ENST00000452979 SUMO1P63165 101 aaKnown RBP8.03□□□□□ -1.12
HERC3-207ENST00000452979 CLLU1Q5K131 121 aa8.03□□□□□ -1.12
HERC3-207ENST00000452979 CST9LP1Q5W188 147 aa8.03□□□□□ -1.12
HERC3-207ENST00000452979 Q6ZRN7 208 aaPredicted RBP8.03□□□□□ -1.12
HERC3-207ENST00000452979 C5orf17Q8NAS9 161 aa8.03□□□□□ -1.12
HERC3-207ENST00000452979 MANBALQ9NQG1 85 aa8.03□□□□□ -1.12
HERC3-207ENST00000452979 RPH3ALQ9UNE2 315 aa8.03□□□□□ -1.12
HERC3-207ENST00000452979 PRELID1Q9Y255 219 aa8.03□□□□□ -1.12
HERC3-207ENST00000452979 A0A0J9YY99 117 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 113 ms