RNA–Protein interactions for RNA: ENST00000451823.2

HMGB3P22-202, Transcript of high mobility group box 3 pseudogene 22, humanhuman

BASIC

Gene HMGB3P22, Length 572 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P22-202ENST00000451823 ZNRD1Q9P1U0 126 aa3.18□□□□□ -1.9
HMGB3P22-202ENST00000451823 ERG28Q9UKR5 140 aa3.18□□□□□ -1.9
HMGB3P22-202ENST00000451823 CYSLTR1Q9Y271 337 aa3.18□□□□□ -1.9
HMGB3P22-202ENST00000451823 F11RQ9Y624 299 aaKnown RBP3.18□□□□□ -1.9
HMGB3P22-202ENST00000451823 RAI1Q7Z5J4 1906 aaPredicted RBP3.18□□□□□ -1.9
HMGB3P22-202ENST00000451823 REV3LO60673 3130 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 A0A087WX48 190 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 TRAV12-1A0A0B4J245 112 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 LOC389332A0A1B0GUA5 103 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 H3BTX0 84 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 SH2D1AO60880 128 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 IGHV3-48P01763 117 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 GLRXP35754 106 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 UBE2D1P51668 147 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 UBE2D3P61077 147 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 UBE2D2P62837 147 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 VMA21Q3ZAQ7 101 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 FAM201AQ5SY85 155 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 ZC2HC1BQ5TFG8 222 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 Q6ZUT4 128 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 S100A7AQ86SG5 101 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 NFE4Q86UQ8 179 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 FAM216BQ8N7L0 139 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 Q8N8P6 123 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 C17orf77Q96MU5 243 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 DEFB127Q9H1M4 99 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 FZR1Q9UM11 496 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 CEP290O15078 2479 aa3.17□□□□□ -1.9
HMGB3P22-202ENST00000451823 COL6A3P12111 3177 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 MUC3AQ02505 3323 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 DNAJC13O75165 2243 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 KNTC1P50748 2209 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 CACNA1GO43497 2377 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 IGHV4-4A0A075B6R2 117 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 A0A1W2PNU3 283 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 TMEM8BA6NDV4 472 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 SMKR1H3BMG3 65 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 K7EIM0 57 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 GAS8-AS1O95177 125 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 IGHV1-46P01743 117 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 MT-ATP8P03928 68 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 LGALS1P09382 135 aaKnown RBP3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 CD7P09564 240 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 SPINK8P0C7L1 97 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 SRD5A1P18405 259 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 CKS2P33552 79 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 LEPP41159 167 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 RPL27AP46776 148 aaKnown RBP3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 XGP55808 180 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 FXYD7P58549 80 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 DIAPH2-AS1Q14236 149 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 ZNF474Q6S9Z5 364 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 AMTNQ6UX39 209 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 C18orf65Q6ZTR6 163 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 IL17RELQ6ZVW7 336 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 GTSCR1Q86UQ5 136 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 ZNF491Q8N8L2 437 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 TMEM105Q8N8V8 129 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 TMEM178AQ8NBL3 297 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 PPDPFLQ8WWR9 84 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 CCL13Q99616 98 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 MAP1LC3AQ9H492 121 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 YAE1D1Q9NRH1 226 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 MDFICQ9P1T7 246 aa3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 TIMM8BQ9Y5J9 83 aaPredicted RBP3.16□□□□□ -1.9
HMGB3P22-202ENST00000451823 TRAV40A0A0B4J280 105 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 M0R3E3 92 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 SPRY3O43610 288 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 BRI3O95415 125 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 APOMO95445 188 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 RBP4P02753 201 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 COX6B1P14854 86 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 CCL3L1P16619 93 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 ZNF80P51504 273 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 LYZP61626 148 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 TMEM155Q4W5P6 130 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 C5orf47Q569G3 176 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 HES3Q5TGS1 186 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 HCP5Q6MZN7 132 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 Q6Q795 121 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 TEN1Q86WV5 123 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 DLX4Q92988 240 aaPredicted RBP3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 RNF183Q96D59 192 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 ASCL2Q99929 193 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 RNF5Q99942 180 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 FOXC2Q99958 501 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 MRPL35Q9NZE8 188 aaKnown RBP3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 SIGLEC9Q9Y336 463 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 NAV3Q8IVL0 2385 aa3.15□□□□□ -1.91
HMGB3P22-202ENST00000451823 CENPVL3A0A0U1RRI6 287 aa3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 MYMXA0A1B0GTQ4 84 aa3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 MBD3L5A6NJ08 208 aaPredicted RBP3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 F8VRH5 84 aa3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 H7C1H1 209 aa3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 K7EMI3 77 aa3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 RHODO00212 210 aa3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 IGLV1-47P01700 117 aa3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 PRSS1P07477 247 aa3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 ZNF883P0CG24 379 aa3.14□□□□□ -1.91
HMGB3P22-202ENST00000451823 CD59P13987 128 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms