RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 LYPD1Q8N2G4 141 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 LINC00612Q8N6U2 182 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 SGK494Q96LW2 274 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 LINC00588Q9Y4M8 146 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 PKD1P98161 4303 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 PKHD1P08F94 4074 aa6.76□□□□□ -1.33
USP54-207ENST00000451492 TRAV8-1A0A0A6YYK1 113 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 RBAKDNA6NC62 111 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 GIPP09681 153 aaPredicted RBP6.75□□□□□ -1.33
USP54-207ENST00000451492 TCL1AP56279 114 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 ZNF415Q09FC8 603 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 DAZ2Q13117 558 aaKnown RBP6.75□□□□□ -1.33
USP54-207ENST00000451492 TMEM183BQ1AE95 376 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 ANXA2RQ3ZCQ2 193 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 FAM74A1Q5RGS3 127 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 PQLC2Q6ZP29 291 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 LINC00336Q6ZUF6 198 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 SSX7Q7RTT5 188 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 TMEM183AQ8IXX5 376 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 INO80EQ8NBZ0 244 aaPredicted RBP6.75□□□□□ -1.33
USP54-207ENST00000451492 AQP10Q96PS8 301 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 OTORQ9NRC9 128 aa6.75□□□□□ -1.33
USP54-207ENST00000451492 RNF222A6NCQ9 220 aa6.74□□□□□ -1.33
USP54-207ENST00000451492 SPINK4O60575 86 aa6.74□□□□□ -1.33
USP54-207ENST00000451492 RGS21Q2M5E4 152 aa6.74□□□□□ -1.33
USP54-207ENST00000451492 C1orf134Q5TEV5 83 aa6.74□□□□□ -1.33
USP54-207ENST00000451492 RPL7L1Q6DKI1 246 aaKnown RBP6.74□□□□□ -1.33
USP54-207ENST00000451492 Q6ZR54 194 aa6.74□□□□□ -1.33
USP54-207ENST00000451492 OR2T35Q8NGX2 323 aa6.74□□□□□ -1.33
USP54-207ENST00000451492 ZNRF2Q8NHG8 242 aa6.74□□□□□ -1.33
USP54-207ENST00000451492 RXFP4Q8TDU9 374 aa6.74□□□□□ -1.33
USP54-207ENST00000451492 LINC00467Q9BRT7 94 aa6.74□□□□□ -1.33
USP54-207ENST00000451492 A0A096LPF7 62 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 NBDYA0A0U1RRE5 68 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 SMLR1H3BR10 107 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 NMBP08949 121 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 STAG3L2P0CL84 134 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 STAG3L3P0CL85 134 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 SOHLH1Q5JUK2 328 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 IBA57Q5T440 356 aaKnown RBP6.73□□□□□ -1.33
USP54-207ENST00000451492 FAM159AQ6UWV7 190 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 OR2G3Q8NGZ4 309 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 RAB24Q969Q5 203 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 PSMG3Q9BT73 122 aaPredicted RBP6.73□□□□□ -1.33
USP54-207ENST00000451492 MDFICQ9P1T7 246 aa6.73□□□□□ -1.33
USP54-207ENST00000451492 BORCS7-ASMTA0A0B4J1R7 106 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 A0A1B0GVY2 172 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 SFTA3P0C7M3 94 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 GCHFRP30047 84 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 FAM3BP58499 235 aaPredicted RBP6.72□□□□□ -1.33
USP54-207ENST00000451492 Q6AWC8 147 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 VSIG2Q96IQ7 327 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 C8orf49Q96NF6 230 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 TREM1Q9NP99 234 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 TNFSF18Q9UNG2 199 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 MUC4Q99102 2169 aa6.72□□□□□ -1.33
USP54-207ENST00000451492 TRGV11A0A075B6L2 103 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 TRGV4A0A0C4DH28 118 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 TRBV7-9A0A0J9YWB2 115 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 ARPC5O15511 151 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 PAX4O43316 350 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 GNRH2O43555 120 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 CXorf1O96002 111 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 MBP02144 154 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 FGF8P55075 233 aaPredicted RBP6.71□□□□□ -1.34
USP54-207ENST00000451492 UBE2G2P60604 165 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 ESRGQ1W209 222 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 TVP23CQ96ET8 276 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 ST6GAL2Q96JF0 529 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 NDFIP1Q9BT67 221 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 ACTR3CQ9C0K3 210 aaPredicted RBP6.71□□□□□ -1.34
USP54-207ENST00000451492 LENEPQ9Y5L5 61 aa6.71□□□□□ -1.34
USP54-207ENST00000451492 TRAV21A0A0B4J279 112 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 GGTLC3B5MD39 225 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 TCRAP04437 139 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 TYMSP04818 313 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 SUMO1P63165 101 aaKnown RBP6.7□□□□□ -1.34
USP54-207ENST00000451492 SERF2P84101 59 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 PRNTQ86SH4 94 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 C6orf223Q8N319 242 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 TMEM75Q8N9X5 138 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 C5orf17Q8NAS9 161 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 TMED6Q8WW62 240 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 ASB13Q8WXK3 278 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 ZNF479Q96JC4 524 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 KRTAP1-5Q9BYS1 174 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 Q9H8V8 135 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 ICOSQ9Y6W8 199 aa6.7□□□□□ -1.34
USP54-207ENST00000451492 HERC2O95714 4834 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 G3V3Q6 166 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 K7EQM0 130 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 ZNF80P51504 273 aaPredicted RBP6.69□□□□□ -1.34
USP54-207ENST00000451492 TNP2Q05952 138 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 ZNF726P1Q15940 193 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 ZFP69Q49AA0 526 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 AKR1C8PQ5T2L2 129 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 ZNF575Q86XF7 245 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 SDF2L1Q9HCN8 221 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 TMEM167BQ9NRX6 74 aa6.69□□□□□ -1.34
USP54-207ENST00000451492 PSG8Q9UQ74 426 aa6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms