RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 LST1O00453 97 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 CLPSP04118 112 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 RNASE1P07998 156 aaKnown RBP1.74□□□□□ -2.13
USP53-202ENST00000450251 LINC00310P59036 64 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 CXCL6P80162 114 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 FAM182BQ5T319 152 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 KLF14Q8TD94 323 aaPredicted RBP1.74□□□□□ -2.13
USP53-202ENST00000450251 ITLN1Q8WWA0 313 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 UPK3BQ9BT76 320 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 SRXN1Q9BYN0 137 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 LINC01546A6NGU7 62 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 USP17L23D6RBM5 183 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 SMKR1H3BMG3 65 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 C15orf65H3BRN8 121 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 IGLV2-8P01709 118 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 PATE4P0C8F1 98 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 GP9P14770 177 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 ERCC8Q13216 396 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 ECSCRQ19T08 205 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 SP5Q6BEB4 398 aaPredicted RBP1.74□□□□□ -2.13
USP53-202ENST00000450251 ZNF833PQ6ZTB9 187 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 DYNAPQ8N1N2 210 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 FAM216BQ8N7L0 139 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 SPTBN4Q9H254 2564 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 NINQ8N4C6 2090 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 IGKV2-40A0A087WW87 121 aaPredicted RBP1.74□□□□□ -2.13
USP53-202ENST00000450251 TRAV41A0A0B4J266 112 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 LINC00473A8K010 186 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 MRPS12O15235 138 aaKnown RBP1.74□□□□□ -2.13
USP53-202ENST00000450251 IGKV2D-40P01614 121 aaPredicted RBP1.74□□□□□ -2.13
USP53-202ENST00000450251 P0C879 139 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 MP68P56378 58 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 C3orf36Q3SXR2 165 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 SPRNQ5BIV9 151 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 ASPHD1Q5U4P2 390 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 CCL4L1Q8NHW4 92 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 RETNQ9HD89 108 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 ESM1Q9NQ30 184 aa1.74□□□□□ -2.13
USP53-202ENST00000450251 HELZP42694 1942 aaKnown RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 TEX49A0A1B0GTD5 131 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 FAM223BA6NKX1 122 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 NBR2O15453 112 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 RNASE4P34096 147 aaKnown RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 NBL1P41271 181 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 LINC00158P58513 81 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 APRG1Q8IVJ8 170 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 FAM223AQ8IWN6 122 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 EXOC3-AS1Q8N2X6 119 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 LINC00311Q8N616 119 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 NEXN-AS1Q8NBZ9 246 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 DEFB108BQ8NET1 73 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 FLVCR1-AS1Q8TAF5 88 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 DPH3Q96FX2 82 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 LINC01587Q99440 93 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 PTPRZ1P23471 2315 aaPredicted RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 ANKRD11Q6UB99 2663 aaPredicted RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 TRPM6Q9BX84 2022 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 IGHV3-30P01768 117 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 IGHV3-33P01772 117 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 IGHV3-30-5P0DP03 117 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 CCL3P10147 92 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 UBE2D1P51668 147 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 FAM74A4Q5TZK3 123 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 Q6ZR03 302 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 MRPL36Q9P0J6 103 aaKnown RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 RNF114Q9Y508 228 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 MGAMO43451 1857 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 CHD3Q12873 2000 aaKnown RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 FLNBO75369 2602 aaKnown RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 HELZ2Q9BYK8 2649 aaKnown RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 IGLV3-12A0A075B6K2 115 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 ADARB2-AS1A8MUL3 147 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 H3BTX0 84 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 COL8A2P25067 703 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 DAZ2Q13117 558 aaKnown RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 DIAPH2-AS1Q14236 149 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 PRR31Q5SQ13 230 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 LILRA6Q6PI73 481 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 CD164L2Q6UWJ8 174 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 ODF3L1Q8IXM7 274 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 MBD3L2Q8NHZ7 208 aaPredicted RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 TMEM263Q8WUH6 116 aaKnown RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 FAM168AQ92567 244 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 C8orf49Q96NF6 230 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 SELENOKQ9Y6D0 94 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 PIKFYVEQ9Y2I7 2098 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 PLXND1Q9Y4D7 1925 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 TRAV26-2A0A0B4J265 109 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 IGHV1-58A0A0C4DH39 117 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 SRRM5B3KS81 715 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 TRBV12-3P01733 135 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 CMC4P56277 68 aaPredicted RBP1.73□□□□□ -2.13
USP53-202ENST00000450251 GFRALQ6UXV0 394 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 NRACQ8N912 160 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 PLPPR2Q96GM1 343 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 SPRY4Q9C004 299 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 SIRPDQ9H106 197 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 DENND4CQ5VZ89 1909 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 IGKV3D-7A0A0C4DH55 119 aa1.73□□□□□ -2.13
USP53-202ENST00000450251 A0A0J9YY99 117 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms