RNA–Protein interactions for RNA: ENST00000449879.5

RAB11FIP3-204, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-204ENST00000449879 GAGE12FP0CL80 117 aa11.55□□□□□ -0.56
RAB11FIP3-204ENST00000449879 GAGE12GP0CL81 117 aa11.55□□□□□ -0.56
RAB11FIP3-204ENST00000449879 GAGE12IP0CL82 117 aa11.55□□□□□ -0.56
RAB11FIP3-204ENST00000449879 CT45A10P0DMU9 189 aa11.55□□□□□ -0.56
RAB11FIP3-204ENST00000449879 LEPP41159 167 aa11.55□□□□□ -0.56
RAB11FIP3-204ENST00000449879 LINC00477Q96M19 166 aa11.55□□□□□ -0.56
RAB11FIP3-204ENST00000449879 C16orf90A8MZG2 172 aa11.54□□□□□ -0.56
RAB11FIP3-204ENST00000449879 SNURFLB1AK76 121 aa11.54□□□□□ -0.56
RAB11FIP3-204ENST00000449879 ERCC8Q13216 396 aa11.54□□□□□ -0.56
RAB11FIP3-204ENST00000449879 FAM74A1Q5RGS3 127 aa11.54□□□□□ -0.56
RAB11FIP3-204ENST00000449879 AKR1C8PQ5T2L2 129 aa11.54□□□□□ -0.56
RAB11FIP3-204ENST00000449879 TMEM78Q5T7P6 136 aa11.54□□□□□ -0.56
RAB11FIP3-204ENST00000449879 TCTE3Q8IZS6 198 aa11.54□□□□□ -0.56
RAB11FIP3-204ENST00000449879 Q9H8V8 135 aa11.54□□□□□ -0.56
RAB11FIP3-204ENST00000449879 KANTRA0A1W2PQU2 76 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 BCL2L11O43521 198 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 CXorf1O96002 111 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 HOXA5P20719 270 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 C9orf47Q6ZRZ4 202 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 LINC00612Q8N6U2 182 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 CMTM2Q8TAZ6 248 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 RXFP4Q8TDU9 374 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 AGPAT4-IT1Q9H0P7 198 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 OTORQ9NRC9 128 aa11.53□□□□□ -0.56
RAB11FIP3-204ENST00000449879 hCG_2014768A0A024R1R8 64 aa11.52□□□□□ -0.57
RAB11FIP3-204ENST00000449879 CTXND1A0A1B0GTU2 59 aa11.52□□□□□ -0.57
RAB11FIP3-204ENST00000449879 RBAKDNA6NC62 111 aa11.52□□□□□ -0.57
RAB11FIP3-204ENST00000449879 SLC25A5P05141 298 aaKnown RBP11.52□□□□□ -0.57
RAB11FIP3-204ENST00000449879 GCHFRP30047 84 aa11.52□□□□□ -0.57
RAB11FIP3-204ENST00000449879 HYLS1Q96M11 299 aa11.52□□□□□ -0.57
RAB11FIP3-204ENST00000449879 ZNF471Q9BX82 626 aaPredicted RBP11.52□□□□□ -0.57
RAB11FIP3-204ENST00000449879 KRTAP4-5Q9BYR2 181 aa11.52□□□□□ -0.57
RAB11FIP3-204ENST00000449879 TMEM167BQ9NRX6 74 aa11.52□□□□□ -0.57
RAB11FIP3-204ENST00000449879 PGPA6NDG6 321 aa11.51□□□□□ -0.57
RAB11FIP3-204ENST00000449879 PFDN1O60925 122 aa11.51□□□□□ -0.57
RAB11FIP3-204ENST00000449879 SUN5Q8TC36 379 aa11.51□□□□□ -0.57
RAB11FIP3-204ENST00000449879 FAM19A4Q96LR4 140 aa11.51□□□□□ -0.57
RAB11FIP3-204ENST00000449879 VGLL1Q99990 258 aa11.51□□□□□ -0.57
RAB11FIP3-204ENST00000449879 PYGO2Q9BRQ0 406 aa11.51□□□□□ -0.57
RAB11FIP3-204ENST00000449879 DIRC3C9JPN6 131 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 ZNF138P52744 262 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 EIF5AP63241 154 aaKnown RBP11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 ZNF726P1Q15940 193 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 ESRGQ1W209 222 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 Q6ZTI0 123 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 TMUB2Q71RG4 321 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 AKAP14Q86UN6 197 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 IQCF2Q8IXL9 164 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 ARL6IP6Q8N6S5 226 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 RPH3ALQ9UNE2 315 aa11.5□□□□□ -0.57
RAB11FIP3-204ENST00000449879 C7orf71A4D174 169 aa11.49□□□□□ -0.57
RAB11FIP3-204ENST00000449879 KLLNB2CW77 178 aa11.49□□□□□ -0.57
RAB11FIP3-204ENST00000449879 NMBP08949 121 aa11.49□□□□□ -0.57
RAB11FIP3-204ENST00000449879 SEC11BP0C7V7 166 aa11.49□□□□□ -0.57
RAB11FIP3-204ENST00000449879 CRISP2P16562 243 aa11.49□□□□□ -0.57
RAB11FIP3-204ENST00000449879 DAZ2Q13117 558 aaKnown RBP11.49□□□□□ -0.57
RAB11FIP3-204ENST00000449879 TMPRSS5Q9H3S3 457 aa11.49□□□□□ -0.57
RAB11FIP3-204ENST00000449879 GSN-AS1Q9NRJ2 163 aa11.49□□□□□ -0.57
RAB11FIP3-204ENST00000449879 ZNF492Q9P255 531 aa11.49□□□□□ -0.57
RAB11FIP3-204ENST00000449879 TRBV7-9A0A0J9YWB2 115 aa11.48□□□□□ -0.57
RAB11FIP3-204ENST00000449879 C1QBP02746 253 aa11.48□□□□□ -0.57
RAB11FIP3-204ENST00000449879 GPX1P07203 203 aa11.48□□□□□ -0.57
RAB11FIP3-204ENST00000449879 Q8TAT8 98 aa11.48□□□□□ -0.57
RAB11FIP3-204ENST00000449879 KRTAP1-5Q9BYS1 174 aa11.48□□□□□ -0.57
RAB11FIP3-204ENST00000449879 RYR1P21817 5038 aa11.48□□□□□ -0.57
RAB11FIP3-204ENST00000449879 TRGV2A0A075B6R0 118 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 H3BNG1 76 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 TPT1P13693 172 aaKnown RBP11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 RNASE4P34096 147 aaKnown RBP11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 CD300CQ08708 224 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 BTN1A1Q13410 526 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 TTC32Q5I0X7 151 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 GOLT1AQ6ZVE7 132 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 ZFAND2AQ8N6M9 145 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 C5orf17Q8NAS9 161 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 TMED6Q8WW62 240 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 LENEPQ9Y5L5 61 aa11.47□□□□□ -0.57
RAB11FIP3-204ENST00000449879 SERTM2A0A1B0GWG4 89 aa11.46□□□□□ -0.57
RAB11FIP3-204ENST00000449879 MAP1LC3B2A6NCE7 125 aa11.46□□□□□ -0.57
RAB11FIP3-204ENST00000449879 UMAD1C9J7I0 102 aa11.46□□□□□ -0.57
RAB11FIP3-204ENST00000449879 ZNF324O75467 553 aaPredicted RBP11.46□□□□□ -0.57
RAB11FIP3-204ENST00000449879 GNG5P63218 68 aa11.46□□□□□ -0.57
RAB11FIP3-204ENST00000449879 SPATA12Q7Z6I5 190 aa11.46□□□□□ -0.57
RAB11FIP3-204ENST00000449879 STOML3Q8TAV4 291 aa11.46□□□□□ -0.57
RAB11FIP3-204ENST00000449879 UPK3BQ9BT76 320 aa11.46□□□□□ -0.57
RAB11FIP3-204ENST00000449879 MAP1LC3BQ9GZQ8 125 aa11.46□□□□□ -0.57
RAB11FIP3-204ENST00000449879 TRGV1A0A0A0MS02 117 aa11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 A0A1W2PRE2 83 aa11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 GGTLC3B5MD39 225 aa11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 CDK2AP2O75956 126 aa11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 FGF8P55075 233 aaPredicted RBP11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 LGALSLQ3ZCW2 172 aaPredicted RBP11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 PRR9Q5T870 116 aa11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 EIF4E3Q8N5X7 224 aaKnown RBP11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 C11orf72Q8NBR9 251 aa11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 ZNF680Q8NEM1 530 aa11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 VSIG2Q96IQ7 327 aa11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 MRPS16Q9Y3D3 137 aaKnown RBP11.45□□□□□ -0.58
RAB11FIP3-204ENST00000449879 K7EQM0 130 aa11.44□□□□□ -0.58
RAB11FIP3-204ENST00000449879 FHITP49789 147 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms