RNA–Protein interactions for RNA: ENST00000449744.1

CHD3-205, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 880 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-205ENST00000449744 C18orf15Q96N68 181 aa10.64□□□□□ -0.71
CHD3-205ENST00000449744 TP53TG3Q9ULZ0 132 aa10.64□□□□□ -0.71
CHD3-205ENST00000449744 RPH3ALQ9UNE2 315 aa10.64□□□□□ -0.71
CHD3-205ENST00000449744 PGPA6NDG6 321 aa10.63□□□□□ -0.71
CHD3-205ENST00000449744 DIRC3C9JPN6 131 aa10.63□□□□□ -0.71
CHD3-205ENST00000449744 SPINK4O60575 86 aa10.63□□□□□ -0.71
CHD3-205ENST00000449744 RAB2AP61019 212 aa10.63□□□□□ -0.71
CHD3-205ENST00000449744 ZNF415Q09FC8 603 aa10.63□□□□□ -0.71
CHD3-205ENST00000449744 OTORQ9NRC9 128 aa10.63□□□□□ -0.71
CHD3-205ENST00000449744 LENEPQ9Y5L5 61 aa10.63□□□□□ -0.71
CHD3-205ENST00000449744 DNAH2Q9P225 4427 aa10.62□□□□□ -0.71
CHD3-205ENST00000449744 MUC21Q5SSG8 566 aa10.62□□□□□ -0.71
CHD3-205ENST00000449744 Q6ZQT7 251 aa10.62□□□□□ -0.71
CHD3-205ENST00000449744 Q9H8V8 135 aa10.62□□□□□ -0.71
CHD3-205ENST00000449744 HMGB3O15347 200 aaKnown RBP10.61□□□□□ -0.71
CHD3-205ENST00000449744 FAM159AQ6UWV7 190 aa10.61□□□□□ -0.71
CHD3-205ENST00000449744 C6orf223Q8N319 242 aa10.61□□□□□ -0.71
CHD3-205ENST00000449744 HSD17B11Q8NBQ5 300 aa10.61□□□□□ -0.71
CHD3-205ENST00000449744 TMED6Q8WW62 240 aa10.61□□□□□ -0.71
CHD3-205ENST00000449744 MRPL16Q9NX20 251 aaKnown RBP10.61□□□□□ -0.71
CHD3-205ENST00000449744 DNAH17Q9UFH2 4485 aa10.61□□□□□ -0.71
CHD3-205ENST00000449744 IGHV3-53P01767 116 aa10.6□□□□□ -0.71
CHD3-205ENST00000449744 CDC34P49427 236 aaPredicted RBP10.6□□□□□ -0.71
CHD3-205ENST00000449744 ESRGQ1W209 222 aa10.6□□□□□ -0.71
CHD3-205ENST00000449744 ST6GAL2Q96JF0 529 aa10.6□□□□□ -0.71
CHD3-205ENST00000449744 AQP10Q96PS8 301 aa10.6□□□□□ -0.71
CHD3-205ENST00000449744 TRGV11A0A075B6L2 103 aa10.59□□□□□ -0.71
CHD3-205ENST00000449744 A0A096LPF7 62 aa10.59□□□□□ -0.71
CHD3-205ENST00000449744 TTC32Q5I0X7 151 aa10.59□□□□□ -0.71
CHD3-205ENST00000449744 Q6AWC8 147 aa10.59□□□□□ -0.71
CHD3-205ENST00000449744 GOLT1AQ6ZVE7 132 aa10.59□□□□□ -0.71
CHD3-205ENST00000449744 ARL6IP6Q8N6S5 226 aa10.59□□□□□ -0.71
CHD3-205ENST00000449744 OR2G3Q8NGZ4 309 aa10.59□□□□□ -0.71
CHD3-205ENST00000449744 VSIG2Q96IQ7 327 aa10.59□□□□□ -0.71
CHD3-205ENST00000449744 PSMG3Q9BT73 122 aaPredicted RBP10.59□□□□□ -0.71
CHD3-205ENST00000449744 NAGKQ9UJ70 344 aa10.59□□□□□ -0.71
CHD3-205ENST00000449744 FAT2Q9NYQ8 4349 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 PAX4O43316 350 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 MBP02144 154 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 GIPP09681 153 aaPredicted RBP10.58□□□□□ -0.72
CHD3-205ENST00000449744 ARL14EPLP0DKL9 152 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 ATP6V0CP27449 155 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 SLAQ13239 276 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 TMEM183BQ1AE95 376 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 TMEM183AQ8IXX5 376 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 INO80EQ8NBZ0 244 aaPredicted RBP10.58□□□□□ -0.72
CHD3-205ENST00000449744 ASB13Q8WXK3 278 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 UPK3BQ9BT76 320 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 MRPS16Q9Y3D3 137 aaKnown RBP10.58□□□□□ -0.72
CHD3-205ENST00000449744 ICOSQ9Y6W8 199 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 HECTD4Q9Y4D8 3996 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 KIAA1109Q2LD37 5005 aa10.58□□□□□ -0.72
CHD3-205ENST00000449744 PCLOQ9Y6V0 5065 aa10.57□□□□□ -0.72
CHD3-205ENST00000449744 STAG3L2P0CL84 134 aa10.57□□□□□ -0.72
CHD3-205ENST00000449744 STAG3L3P0CL85 134 aa10.57□□□□□ -0.72
CHD3-205ENST00000449744 GNG5P63218 68 aa10.57□□□□□ -0.72
CHD3-205ENST00000449744 SERF2P84101 59 aa10.57□□□□□ -0.72
CHD3-205ENST00000449744 SPXQ9BT56 116 aa10.57□□□□□ -0.72
CHD3-205ENST00000449744 MDFICQ9P1T7 246 aa10.57□□□□□ -0.72
CHD3-205ENST00000449744 PRO0255Q9UI72 69 aa10.57□□□□□ -0.72
CHD3-205ENST00000449744 TRAV21A0A0B4J279 112 aa10.56□□□□□ -0.72
CHD3-205ENST00000449744 TRGV4A0A0C4DH28 118 aa10.56□□□□□ -0.72
CHD3-205ENST00000449744 MED14OSP0DP75 135 aa10.56□□□□□ -0.72
CHD3-205ENST00000449744 TNP2Q05952 138 aa10.56□□□□□ -0.72
CHD3-205ENST00000449744 Q5BKY6 102 aa10.56□□□□□ -0.72
CHD3-205ENST00000449744 RAB24Q969Q5 203 aa10.56□□□□□ -0.72
CHD3-205ENST00000449744 NDFIP1Q9BT67 221 aa10.56□□□□□ -0.72
CHD3-205ENST00000449744 ACTR3CQ9C0K3 210 aaPredicted RBP10.56□□□□□ -0.72
CHD3-205ENST00000449744 TREM1Q9NP99 234 aa10.56□□□□□ -0.72
CHD3-205ENST00000449744 HHLA3Q9XRX5 114 aa10.56□□□□□ -0.72
CHD3-205ENST00000449744 FXYD6-FXYD2A0A087WZ82 144 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 TRAV8-1A0A0A6YYK1 113 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 BORCS7-ASMTA0A0B4J1R7 106 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 SERTM2A0A1B0GWG4 89 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 F6UZH7 168 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 K7EQM0 130 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 GCHFRP30047 84 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 CRYBA4P53673 196 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 C8orf49Q96NF6 230 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 TNFSF18Q9UNG2 199 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 MUC4Q99102 2169 aa10.55□□□□□ -0.72
CHD3-205ENST00000449744 A0A1W2PPQ1 181 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 CXorf1O96002 111 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 FHL2Q14192 279 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 RGS21Q2M5E4 152 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 TDRG1Q3Y452 100 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 IQCF2Q8IXL9 164 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 C5orf17Q8NAS9 161 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 SGK494Q96LW2 274 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 SH3BGRL3Q9H299 93 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 TMEM167BQ9NRX6 74 aa10.54□□□□□ -0.72
CHD3-205ENST00000449744 GNRH2O43555 120 aa10.53□□□□□ -0.72
CHD3-205ENST00000449744 MRPL23Q16540 153 aaKnown RBP10.53□□□□□ -0.72
CHD3-205ENST00000449744 RPL7L1Q6DKI1 246 aaKnown RBP10.53□□□□□ -0.72
CHD3-205ENST00000449744 OR2T35Q8NGX2 323 aa10.53□□□□□ -0.72
CHD3-205ENST00000449744 RASL10AQ92737 203 aa10.53□□□□□ -0.72
CHD3-205ENST00000449744 TVP23CQ96ET8 276 aa10.53□□□□□ -0.72
CHD3-205ENST00000449744 KCNS1Q96KK3 526 aa10.53□□□□□ -0.72
CHD3-205ENST00000449744 SDF2L1Q9HCN8 221 aa10.53□□□□□ -0.72
CHD3-205ENST00000449744 RNF222A6NCQ9 220 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms