RNA–Protein interactions for RNA: ENST00000449600.1

NPHP1-208, Transcript of nephrocystin 1, humanhuman

TSL 3

Gene NPHP1, Length 486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1-208ENST00000449600 TSPAN4O14817 238 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 TFPI2P48307 235 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 CMC4P56277 68 aaPredicted RBP6.13□□□□□ -1.43
NPHP1-208ENST00000449600 RPL23P62829 140 aaKnown RBP6.13□□□□□ -1.43
NPHP1-208ENST00000449600 RPL19P84098 196 aaKnown RBP6.13□□□□□ -1.43
NPHP1-208ENST00000449600 FLI1Q01543 452 aaPredicted RBP6.13□□□□□ -1.43
NPHP1-208ENST00000449600 FHL3Q13643 280 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 DEFB121Q5J5C9 76 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 TMEM78Q5T7P6 136 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 GBGT1Q8N5D6 347 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 DERL1Q9BUN8 251 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 PPP1R14DQ9NXH3 145 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 PSG8Q9UQ74 426 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 KLF12Q9Y4X4 402 aa6.13□□□□□ -1.43
NPHP1-208ENST00000449600 TRAV2A0A0B4J234 112 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 OR4C46A6NHA9 309 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 M0R3E3 92 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 ERVFC1-1P60608 527 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 KIAA1109Q2LD37 5005 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 IGFL4Q6B9Z1 124 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 EBLN2Q6P2I7 272 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 KCNIP4Q6PIL6 250 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 LINC01551Q86U37 167 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 OR10G8Q8NGN5 311 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 OCC1Q8TAD7 63 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 BTF3L4Q96K17 158 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 MS4A6AQ9H2W1 248 aa6.12□□□□□ -1.43
NPHP1-208ENST00000449600 IGKV2-40A0A087WW87 121 aaPredicted RBP6.11□□□□□ -1.43
NPHP1-208ENST00000449600 CXorf65A6NEN9 183 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 SAP30O75446 220 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 IGKV2D-40P01614 121 aaPredicted RBP6.11□□□□□ -1.43
NPHP1-208ENST00000449600 CSN3P07498 182 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 BTN1A1Q13410 526 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 RNF212Q495C1 297 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 Q86TA4 180 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 TMEM183AQ8IXX5 376 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 RNF182Q8N6D2 247 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 OR2K2Q8NGT1 345 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 ISOC2Q96AB3 205 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 SFRP2Q96HF1 295 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 LINC00477Q96M19 166 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 LINC00479Q96M42 142 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 TMEM242Q9NWH2 141 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 SIGLEC8Q9NYZ4 499 aa6.11□□□□□ -1.43
NPHP1-208ENST00000449600 TRAV8-2A0A0B4J237 113 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 XKRY2A2RUG3 117 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 ZNF705FA8MVS1 300 aaPredicted RBP6.1□□□□□ -1.43
NPHP1-208ENST00000449600 K7EQG2 157 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 GATCO43716 136 aaKnown RBP6.1□□□□□ -1.43
NPHP1-208ENST00000449600 DUSP14O95147 198 aaKnown RBP6.1□□□□□ -1.43
NPHP1-208ENST00000449600 GCGP01275 180 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 LTAP01374 205 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 ZNF688P0C7X2 276 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 HLA-DMBP28068 263 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 ZNF138P52744 262 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 HIST1H1AQ02539 215 aaPredicted RBP6.1□□□□□ -1.43
NPHP1-208ENST00000449600 DEFB114Q30KQ6 69 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 SMUG1Q53HV7 270 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 PSMG4Q5JS54 123 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 IBA57Q5T440 356 aaKnown RBP6.1□□□□□ -1.43
NPHP1-208ENST00000449600 PRR27Q6MZM9 219 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 ATRAIDQ6UW56 229 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.1□□□□□ -1.43
NPHP1-208ENST00000449600 WFDC9Q8NEX5 89 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 SGK494Q96LW2 274 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 IGF2BP2-AS1Q96M15 143 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 SPAG8Q99932 426 aaPredicted RBP6.1□□□□□ -1.43
NPHP1-208ENST00000449600 MCRIP2Q9BUT9 160 aaKnown RBP6.1□□□□□ -1.43
NPHP1-208ENST00000449600 OSTCQ9NRP0 149 aa6.1□□□□□ -1.43
NPHP1-208ENST00000449600 TRAV8-1A0A0A6YYK1 113 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 PGPEP1LA6NFU8 196 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 ZNF705GA8MUZ8 300 aaPredicted RBP6.09□□□□□ -1.43
NPHP1-208ENST00000449600 SOCS3O14543 225 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 SCO1O75880 301 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 P01737 135 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 TSPOP30536 169 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 INSL3P51460 131 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 OR5I1Q13606 314 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 TMEM88Q6PEY1 159 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 C9orf47Q6ZRZ4 202 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 NHLRC2Q8NBF2 726 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 OR4B1Q8NGF8 309 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 OR8A1Q8NGG7 326 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 TUBA4BQ9H853 241 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 ZNF492Q9P255 531 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 LENEPQ9Y5L5 61 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 SELENOKQ9Y6D0 94 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 STARD9Q9P2P6 4700 aa6.09□□□□□ -1.43
NPHP1-208ENST00000449600 TRBV20OR9-2A0A075B6H5 130 aa6.08□□□□□ -1.44
NPHP1-208ENST00000449600 EDN2P20800 178 aa6.08□□□□□ -1.44
NPHP1-208ENST00000449600 LEPP41159 167 aa6.08□□□□□ -1.44
NPHP1-208ENST00000449600 RPS20P60866 119 aaKnown RBP6.08□□□□□ -1.44
NPHP1-208ENST00000449600 ERCC8Q13216 396 aa6.08□□□□□ -1.44
NPHP1-208ENST00000449600 CD300EQ496F6 205 aaPredicted RBP6.08□□□□□ -1.44
NPHP1-208ENST00000449600 FAM162BQ5T6X4 162 aa6.08□□□□□ -1.44
NPHP1-208ENST00000449600 C9orf66Q5T8R8 295 aa6.08□□□□□ -1.44
NPHP1-208ENST00000449600 FAM231DQ6ZW35 169 aa6.08□□□□□ -1.44
NPHP1-208ENST00000449600 CBLN2Q8IUK8 224 aa6.08□□□□□ -1.44
NPHP1-208ENST00000449600 TMEM61Q8N0U2 210 aa6.08□□□□□ -1.44
NPHP1-208ENST00000449600 DCANP1Q8TF63 244 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms