RNA–Protein interactions for RNA: ENST00000449575.6

CCDC171-203, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-203ENST00000449575 VCX2Q9H322 139 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 TMEM167BQ9NRX6 74 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 A0A1B0GV72 72 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 INS-IGF2F8WCM5 200 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 K7EIM0 57 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 SAP30O75446 220 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 KLK9Q2XQG4 91 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 IBA57Q5T440 356 aaKnown RBP7.56□□□□□ -1.2
CCDC171-203ENST00000449575 RNASEKQ6P5S7 137 aaKnown RBP7.56□□□□□ -1.2
CCDC171-203ENST00000449575 OR1B1Q8NGR6 318 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 RNF125Q96EQ8 232 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 CHRDL1Q9BU40 450 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 FNDC4Q9H6D8 234 aaPredicted RBP7.56□□□□□ -1.2
CCDC171-203ENST00000449575 MRPL36Q9P0J6 103 aaKnown RBP7.56□□□□□ -1.2
CCDC171-203ENST00000449575 KLK9Q9UKQ9 250 aa7.56□□□□□ -1.2
CCDC171-203ENST00000449575 TRAV8-6A0A0B4J262 113 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 C15orf62A8K5M9 175 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 LGALS1P09382 135 aaKnown RBP7.55□□□□□ -1.2
CCDC171-203ENST00000449575 ATP5G2Q06055 141 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 RAB31Q13636 194 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 ENY2Q9NPA8 101 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 C7orf71A4D174 169 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 F8W735 103 aaPredicted RBP7.55□□□□□ -1.2
CCDC171-203ENST00000449575 I3L2K1 104 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 CCL24O00175 119 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 SLURP1P55000 103 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 UFSP1Q6NVU6 142 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 TREML4Q6UXN2 200 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 CLEC19AQ6UXS0 136 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 PQLC2Q6ZP29 291 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 GGTLC1Q9BX51 225 aa7.55□□□□□ -1.2
CCDC171-203ENST00000449575 A6NDN8 102 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 FAM223BA6NKX1 122 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 OR5AL1P0C617 328 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 GPR183P32249 361 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 TCL1AP56279 114 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 FAM223AQ8IWN6 122 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 CHCHD1Q96BP2 118 aaKnown RBP7.54□□□□□ -1.2
CCDC171-203ENST00000449575 USMG5Q96IX5 58 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 SCRT2Q9NQ03 307 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 IGHV3-35A0A0C4DH35 117 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 A0A0G2JLM5 398 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 SYS1-DBNDD2H3BUS1 97 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 FHL3Q13643 280 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 PVRIGQ6DKI7 326 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 C5orf17Q8NAS9 161 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 OR5A1Q8NGJ0 315 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 OR1N2Q8NGR9 330 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 GLMPQ8WWB7 406 aa7.54□□□□□ -1.2
CCDC171-203ENST00000449575 RNASE7Q9H1E1 156 aaKnown RBP7.54□□□□□ -1.2
CCDC171-203ENST00000449575 H0Y8G0 127 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 H3BRM9 83 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 MIC13Q5XKP0 118 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 NEGR1Q7Z3B1 354 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 ZNF502Q8TBZ5 544 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 MGST2Q99735 147 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 NPVFQ9HCQ7 196 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 SMPXQ9UHP9 88 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 C9orf118A6NHY6 69 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 K7EP34 96 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 PF4P02776 101 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 C2orf83Q53S99 150 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 ATP5L2Q7Z4Y8 100 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 LINC00482Q8N8I6 264 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 DLX4Q92988 240 aaPredicted RBP7.53□□□□□ -1.2
CCDC171-203ENST00000449575 ZNF414Q96IQ9 312 aa7.53□□□□□ -1.2
CCDC171-203ENST00000449575 TECRQ9NZ01 308 aaKnown RBP7.53□□□□□ -1.2
CCDC171-203ENST00000449575 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP7.52□□□□□ -1.21
CCDC171-203ENST00000449575 LEPROTL1O95214 131 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 EDN2P20800 178 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 FAM231DQ6ZW35 169 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 BPIFA4PQ86YQ2 179 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 GRAMD2BQ96HH9 432 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 MAP1LC3CQ9BXW4 147 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 FAM231BA6NCW3 169 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 MGST1P10620 155 aaKnown RBP7.52□□□□□ -1.21
CCDC171-203ENST00000449575 HOXD3P31249 432 aaPredicted RBP7.52□□□□□ -1.21
CCDC171-203ENST00000449575 OXLD1Q5BKU9 147 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 PRR31Q5SQ13 230 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 EEF1AKMT3Q96AZ1 226 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 DAZAP1Q96EP5 407 aaKnown RBP7.52□□□□□ -1.21
CCDC171-203ENST00000449575 C21orf62Q9NYP8 219 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 THYN1Q9P016 225 aa7.52□□□□□ -1.21
CCDC171-203ENST00000449575 IGHV3OR16-8A0A075B7F1 116 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 hDV102S1A0JD36 115 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 LINC01619G3V211 115 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 GATA2P23769 480 aaPredicted RBP7.51□□□□□ -1.21
CCDC171-203ENST00000449575 SUB1P53999 127 aaKnown RBP eCLIP7.51□□□□□ -1.21
CCDC171-203ENST00000449575 TMEM97Q5BJF2 176 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 PRSS46E5RG02 174 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 MYCNOSP40205 109 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 PLP1P60201 277 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 TEPPQ6URK8 271 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 SIGMAR1Q99720 223 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 TPPP3Q9BW30 176 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 HSPB8Q9UJY1 196 aa7.51□□□□□ -1.21
CCDC171-203ENST00000449575 LSM4Q9Y4Z0 139 aaKnown RBP7.51□□□□□ -1.21
CCDC171-203ENST00000449575 TRBV7-1A0A0A6YYK4 115 aa7.5□□□□□ -1.21
CCDC171-203ENST00000449575 CTSGP08311 255 aa7.5□□□□□ -1.21
CCDC171-203ENST00000449575 COX8AP10176 69 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms