RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 BUB1B-PAK6H3BSN5 160 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 SNCGO76070 127 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 SLC25A16P16260 332 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 ZNF56Q15929 161 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 PRSS33Q8NF86 280 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 IGKV2D-26A0A0A0MRZ7 120 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 LOXP28300 417 aaPredicted RBP9.79□□□□□ -0.84
UBE3B-204ENST00000449510 TMEM219Q86XT9 240 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 CTSZQ9UBR2 303 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 TET2Q6N021 2002 aaPredicted RBP9.79□□□□□ -0.84
UBE3B-204ENST00000449510 CHD8Q9HCK8 2581 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 PSMB11A5LHX3 300 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 C12orf74Q32Q52 190 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 TMEM30BQ3MIR4 351 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 DGAT2L7PQ6IED9 249 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 ZNF491Q8N8L2 437 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 KLHL30-AS1Q8NEE0 82 aa9.79□□□□□ -0.84
UBE3B-204ENST00000449510 IGLV1-44P01699 117 aa9.78□□□□□ -0.84
UBE3B-204ENST00000449510 TEX29Q8N6K0 151 aa9.78□□□□□ -0.84
UBE3B-204ENST00000449510 ATP6V0BQ99437 205 aa9.78□□□□□ -0.84
UBE3B-204ENST00000449510 ABHD17AQ96GS6 310 aa9.78□□□□□ -0.84
UBE3B-204ENST00000449510 C2orf91Q6ZV80 131 aa9.78□□□□□ -0.84
UBE3B-204ENST00000449510 KIR2DL4Q99706 377 aa9.78□□□□□ -0.84
UBE3B-204ENST00000449510 A0A087WWL8 130 aa9.77□□□□□ -0.84
UBE3B-204ENST00000449510 DEFB1P60022 68 aa9.77□□□□□ -0.84
UBE3B-204ENST00000449510 CEND1Q8N111 149 aa9.77□□□□□ -0.84
UBE3B-204ENST00000449510 CCL21O00585 134 aa9.77□□□□□ -0.85
UBE3B-204ENST00000449510 GAS8-AS1O95177 125 aa9.77□□□□□ -0.85
UBE3B-204ENST00000449510 BOD1L2Q8IYS8 172 aa9.77□□□□□ -0.85
UBE3B-204ENST00000449510 THAP8Q8NA92 274 aa9.77□□□□□ -0.85
UBE3B-204ENST00000449510 C20orf78Q9BR46 151 aa9.77□□□□□ -0.85
UBE3B-204ENST00000449510 TRAV26-1A0A087WT03 109 aa9.77□□□□□ -0.85
UBE3B-204ENST00000449510 C19orf71A6NCJ1 209 aa9.77□□□□□ -0.85
UBE3B-204ENST00000449510 A8MWV9 139 aa9.77□□□□□ -0.85
UBE3B-204ENST00000449510 TRBV20-1A0A075B6N2 111 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 C9JAW5 83 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 CDX4O14627 284 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-204ENST00000449510 CCDC144NLQ6NUI1 221 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 IGHG3P01860 377 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 APOBEC3AP31941 199 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-204ENST00000449510 TEX36Q5VZQ5 186 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 ZNF562Q6V9R5 426 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 SIGLEC15Q6ZMC9 328 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 DLX4Q92988 240 aaPredicted RBP9.76□□□□□ -0.85
UBE3B-204ENST00000449510 DKK4Q9UBT3 224 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 G3V318 75 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 TMEM155Q4W5P6 130 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 MLST8Q9BVC4 326 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 NCKAP5O14513 1909 aa9.76□□□□□ -0.85
UBE3B-204ENST00000449510 IGLL5B9A064 214 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 LHBP01229 141 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 TRGV3P03979 118 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 DYNAPQ8N1N2 210 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 LINC00477Q96M19 166 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 CLUHP3Q96NS8 147 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 PRSS22Q9GZN4 317 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 IGHV3-73A0A0B4J1V6 119 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 K7EM74 188 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 FGF6P10767 208 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 ASIPP42127 132 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 FAM159AQ6UWV7 190 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 PRADC1Q9BSG0 188 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 KLF12Q9Y4X4 402 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 A0A0G2JNJ9 132 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 PRAC2D3DTV9 90 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 Q9UFV3 132 aa9.75□□□□□ -0.85
UBE3B-204ENST00000449510 INSL3P51460 131 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 TMEM95Q3KNT9 176 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 SS18L2Q9UHA2 77 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 ADARB2-AS1A8MUL3 147 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 H7C1H1 209 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 CD7P09564 240 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 C5orf64Q2M2E5 130 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 C3orf56Q8N813 242 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 FAM215AQ9Y5M1 114 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 CGB3P0DN86 165 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 CGB7P0DN87 165 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 CRIP1P50238 77 aa9.74□□□□□ -0.85
UBE3B-204ENST00000449510 B5MCH6 92 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 ZNF80P51504 273 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-204ENST00000449510 GAGE2BQ13066 116 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 ZNF672Q499Z4 452 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-204ENST00000449510 GAGE2EQ4V326 116 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 TNFRSF14Q92956 283 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 SPAG8Q99932 426 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-204ENST00000449510 GAGE2DQ9UEU5 116 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 IGHV3OR16-12A0A075B7B8 117 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 IGKV3OR2-268A0A0C4DH90 116 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 F8W1H4 67 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 MBD3L4A6NDZ8 208 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-204ENST00000449510 MBD3L3A6NE82 208 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-204ENST00000449510 MBD3L5A6NJ08 208 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-204ENST00000449510 E7EQL1 145 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 C2orf66Q6UXQ4 117 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 MBD3L2Q8NHZ7 208 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-204ENST00000449510 CFHR4Q92496 578 aa9.73□□□□□ -0.85
UBE3B-204ENST00000449510 B9A039 149 aa9.72□□□□□ -0.85
UBE3B-204ENST00000449510 PRR30Q53SZ7 412 aaPredicted RBP9.72□□□□□ -0.85
UBE3B-204ENST00000449510 FOXI2Q6ZQN5 318 aa9.72□□□□□ -0.85
UBE3B-204ENST00000449510 FAM57AQ8TBR7 257 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms