RNA–Protein interactions for RNA: ENST00000449116.6

SHANK2-210, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 939 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-210ENST00000449116 SMIM7Q9BQ49 75 aa10.71□□□□□ -0.69
SHANK2-210ENST00000449116 XCL2Q9UBD3 114 aa10.71□□□□□ -0.69
SHANK2-210ENST00000449116 TRBV20OR9-2A0A075B6H5 130 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 TRAV12-2A0A075B6T6 113 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 UBE2CO00762 179 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 INSP01308 110 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 DEFA6Q01524 100 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 SMUG1Q53HV7 270 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 PRR9Q5T870 116 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 GFI1BQ5VTD9 330 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 COX8CQ7Z4L0 72 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 NHLRC2Q8NBF2 726 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 SMIM12Q96EX1 92 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 MLST8Q9BVC4 326 aa10.7□□□□□ -0.7
SHANK2-210ENST00000449116 C7orf71A4D174 169 aa10.69□□□□□ -0.7
SHANK2-210ENST00000449116 RNASE4P34096 147 aaKnown RBP10.69□□□□□ -0.7
SHANK2-210ENST00000449116 BTN1A1Q13410 526 aa10.69□□□□□ -0.7
SHANK2-210ENST00000449116 NDUFA5Q16718 116 aa10.69□□□□□ -0.7
SHANK2-210ENST00000449116 TMEM218A2RU14 115 aa10.68□□□□□ -0.7
SHANK2-210ENST00000449116 PGPEP1LA6NFU8 196 aa10.68□□□□□ -0.7
SHANK2-210ENST00000449116 GCGP01275 180 aa10.68□□□□□ -0.7
SHANK2-210ENST00000449116 IGLV2-8P01709 118 aa10.68□□□□□ -0.7
SHANK2-210ENST00000449116 CSNK1G2-AS1Q8NCQ2 148 aa10.68□□□□□ -0.7
SHANK2-210ENST00000449116 ZC2HC1AQ96GY0 325 aa10.68□□□□□ -0.7
SHANK2-210ENST00000449116 LY96Q9Y6Y9 160 aa10.68□□□□□ -0.7
SHANK2-210ENST00000449116 TRAV12-3A0A0B4J271 114 aa10.67□□□□□ -0.7
SHANK2-210ENST00000449116 PFN1P07737 140 aaKnown RBP10.67□□□□□ -0.7
SHANK2-210ENST00000449116 MGST1P10620 155 aaKnown RBP10.67□□□□□ -0.7
SHANK2-210ENST00000449116 ZNF80P51504 273 aaPredicted RBP10.67□□□□□ -0.7
SHANK2-210ENST00000449116 Q6AWC8 147 aa10.67□□□□□ -0.7
SHANK2-210ENST00000449116 Q6ZWC4 215 aa10.67□□□□□ -0.7
SHANK2-210ENST00000449116 C20orf144Q9BQM9 153 aa10.67□□□□□ -0.7
SHANK2-210ENST00000449116 NIPSNAP3BQ9BS92 247 aa10.67□□□□□ -0.7
SHANK2-210ENST00000449116 TRAV21A0A0B4J279 112 aa10.66□□□□□ -0.7
SHANK2-210ENST00000449116 ZNF324O75467 553 aaPredicted RBP10.66□□□□□ -0.7
SHANK2-210ENST00000449116 RBMY1A1P0DJD3 496 aaKnown RBP10.66□□□□□ -0.7
SHANK2-210ENST00000449116 RBMY1CP0DJD4 496 aa10.66□□□□□ -0.7
SHANK2-210ENST00000449116 RBMY1FQ15415 496 aaKnown RBP10.66□□□□□ -0.7
SHANK2-210ENST00000449116 TMEM241Q24JQ0 296 aa10.66□□□□□ -0.7
SHANK2-210ENST00000449116 DEFB135Q30KP9 77 aa10.66□□□□□ -0.7
SHANK2-210ENST00000449116 OCC1Q8TAD7 63 aa10.66□□□□□ -0.7
SHANK2-210ENST00000449116 BIN3Q9NQY0 253 aa10.66□□□□□ -0.7
SHANK2-210ENST00000449116 NAT8Q9UHE5 227 aa10.66□□□□□ -0.7
SHANK2-210ENST00000449116 GOLT1BQ9Y3E0 138 aa10.66□□□□□ -0.7
SHANK2-210ENST00000449116 F8W036 122 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 CRIP1P50238 77 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 FAM162BQ5T6X4 162 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 PRR27Q6MZM9 219 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 LINC01551Q86U37 167 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 SBSPONQ8IVN8 264 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 SLC7A5P1Q8MH63 180 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 C1orf158Q8N1D5 194 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 TMEM256Q8N2U0 113 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 RCHY1Q96PM5 261 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 TMEM208Q9BTX3 173 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 SEC11CQ9BY50 192 aa10.65□□□□□ -0.7
SHANK2-210ENST00000449116 FABP5P3A8MUU1 101 aa10.64□□□□□ -0.71
SHANK2-210ENST00000449116 H7BYZ3 331 aa10.64□□□□□ -0.71
SHANK2-210ENST00000449116 K7EN84 100 aa10.64□□□□□ -0.71
SHANK2-210ENST00000449116 SH2D1AO60880 128 aa10.64□□□□□ -0.71
SHANK2-210ENST00000449116 ADCYAP1P18509 176 aa10.64□□□□□ -0.71
SHANK2-210ENST00000449116 ZNF705AQ6ZN79 300 aaPredicted RBP10.64□□□□□ -0.71
SHANK2-210ENST00000449116 Q6ZQT7 251 aa10.64□□□□□ -0.71
SHANK2-210ENST00000449116 RNF183Q96D59 192 aa10.64□□□□□ -0.71
SHANK2-210ENST00000449116 LINC01587Q99440 93 aa10.64□□□□□ -0.71
SHANK2-210ENST00000449116 SDF2L1Q9HCN8 221 aa10.64□□□□□ -0.71
SHANK2-210ENST00000449116 IGHV3OR16-12A0A075B7B8 117 aa10.63□□□□□ -0.71
SHANK2-210ENST00000449116 RPL23P62829 140 aaKnown RBP10.63□□□□□ -0.71
SHANK2-210ENST00000449116 OR5I1Q13606 314 aa10.63□□□□□ -0.71
SHANK2-210ENST00000449116 B9D2Q9BPU9 175 aa10.63□□□□□ -0.71
SHANK2-210ENST00000449116 TP53TG1Q9Y2A0 90 aa10.63□□□□□ -0.71
SHANK2-210ENST00000449116 SPRY2O43597 315 aa10.62□□□□□ -0.71
SHANK2-210ENST00000449116 ADIRFQ15847 76 aa10.62□□□□□ -0.71
SHANK2-210ENST00000449116 DAZAP1Q96EP5 407 aaKnown RBP10.62□□□□□ -0.71
SHANK2-210ENST00000449116 PYGO2Q9BRQ0 406 aa10.62□□□□□ -0.71
SHANK2-210ENST00000449116 NAGKQ9UJ70 344 aa10.62□□□□□ -0.71
SHANK2-210ENST00000449116 IGHV1OR15-1A0A075B7D0 117 aa10.61□□□□□ -0.71
SHANK2-210ENST00000449116 C19orf71A6NCJ1 209 aa10.61□□□□□ -0.71
SHANK2-210ENST00000449116 PNRC1Q12796 327 aaPredicted RBP10.61□□□□□ -0.71
SHANK2-210ENST00000449116 MUC21Q5SSG8 566 aa10.61□□□□□ -0.71
SHANK2-210ENST00000449116 C10orf91Q5T1B1 145 aa10.61□□□□□ -0.71
SHANK2-210ENST00000449116 FAM159AQ6UWV7 190 aa10.61□□□□□ -0.71
SHANK2-210ENST00000449116 SPATA25Q9BR10 227 aa10.61□□□□□ -0.71
SHANK2-210ENST00000449116 TM2D3Q9BRN9 247 aa10.61□□□□□ -0.71
SHANK2-210ENST00000449116 OVOL2Q9BRP0 275 aa10.61□□□□□ -0.71
SHANK2-210ENST00000449116 LINC00467Q9BRT7 94 aa10.61□□□□□ -0.71
SHANK2-210ENST00000449116 KRBOX1C9JBD0 128 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 ORM1P02763 201 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 TDRG1Q3Y452 100 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 ANXA2RQ3ZCQ2 193 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 LINC01559Q495D7 138 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 FAM231DQ6ZW35 169 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 OR11H2Q8NH07 326 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 ISOC2Q96AB3 205 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 KCNS1Q96KK3 526 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 NEU1Q99519 415 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 RETNQ9HD89 108 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 C11orf21Q9P2W6 132 aa10.6□□□□□ -0.71
SHANK2-210ENST00000449116 CARHSP1Q9Y2V2 147 aaKnown RBP10.6□□□□□ -0.71
SHANK2-210ENST00000449116 DNAH9Q9NYC9 4486 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 467.5 ms