RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 PDE6HQ13956 83 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 C1orf162Q8NEQ5 155 aaPredicted RBP7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 TRAV26-2A0A0B4J265 109 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 Q6Q795 121 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 Q6ZQT7 251 aa7.32□□□□□ -1.24
SYNPO2-204ENST00000448416 I3L2K1 104 aa7.31□□□□□ -1.24
SYNPO2-204ENST00000448416 WT1P19544 449 aaPredicted RBP7.31□□□□□ -1.24
SYNPO2-204ENST00000448416 COX8CQ7Z4L0 72 aa7.31□□□□□ -1.24
SYNPO2-204ENST00000448416 KLHL30-AS1Q8NEE0 82 aa7.31□□□□□ -1.24
SYNPO2-204ENST00000448416 PIP4P1Q86T03 277 aa7.31□□□□□ -1.24
SYNPO2-204ENST00000448416 C10orf126Q8N4M7 172 aa7.31□□□□□ -1.24
SYNPO2-204ENST00000448416 TRGV3P03979 118 aa7.31□□□□□ -1.24
SYNPO2-204ENST00000448416 M0R1B8 84 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 ID1P41134 155 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 TMEM200BQ69YZ2 307 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 ZNF575Q86XF7 245 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 C15orf53Q8NAA6 179 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 NTN5Q8WTR8 489 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 DSPP15924 2871 aaKnown RBP7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 GATA4P43694 442 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 IGFL4Q6B9Z1 124 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 TDHQ8IZJ6 230 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 NRACQ8N912 160 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 OR10J6PQ8NGY7 276 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 SIGLEC9Q9Y336 463 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 CFC1BP0CG36 223 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 CFC1P0CG37 223 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 DKK4Q9UBT3 224 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 TRAV8-4A0A0B4J246 113 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 TEX22C9J3V5 150 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 CRIP2P52943 208 aaPredicted RBP7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 Q8N1Y9 231 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 MDS2Q8NDY4 140 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 PRO1854Q9UHT4 67 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 VPREB3Q9UKI3 123 aa7.3□□□□□ -1.24
SYNPO2-204ENST00000448416 PLCE1Q9P212 2302 aa7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 CXCL12P48061 93 aa7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 TRPT1Q86TN4 253 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 S4R3C0 116 aa7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 GLRXP35754 106 aa7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 C3orf56Q8N813 242 aa7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 NEXN-AS1Q8NBZ9 246 aa7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 PPDPFQ9H3Y8 114 aa7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 SRSF2Q01130 221 aaKnown RBP7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 TMEM155Q4W5P6 130 aa7.29□□□□□ -1.24
SYNPO2-204ENST00000448416 IGHV1-46P01743 117 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 HLA-DMBP28068 263 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 PRR30Q53SZ7 412 aaPredicted RBP7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 LINC00311Q8N616 119 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 C9orf106Q8NAJ2 232 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 A0A0J9YY99 117 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 H7C2G1 150 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 K7EIM0 57 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 COX6B1P14854 86 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 ORMDL2Q53FV1 153 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 SMIM2Q9BVW6 85 aa7.28□□□□□ -1.24
SYNPO2-204ENST00000448416 MALRD1Q5VYJ5 2156 aa7.27□□□□□ -1.24
SYNPO2-204ENST00000448416 RASL10AQ92737 203 aa7.27□□□□□ -1.24
SYNPO2-204ENST00000448416 ODF3Q96PU9 254 aa7.27□□□□□ -1.24
SYNPO2-204ENST00000448416 TMEM126AQ9H061 195 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 SLC25A15Q9Y619 301 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 CRYGBP07316 175 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 RPL7P18124 248 aaKnown RBP7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 ERCC8Q13216 396 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 SPANXN1Q5VSR9 72 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 FAM57AQ8TBR7 257 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 BAALCQ8WXS3 180 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 CFHR4Q92496 578 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 TRAV2A0A0B4J234 112 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 M0QXV9 152 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 CCL8P80075 99 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 C3orf36Q3SXR2 165 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 TEX36Q5VZQ5 186 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 TOMM6Q96B49 74 aa7.27□□□□□ -1.25
SYNPO2-204ENST00000448416 TEX49A0A1B0GTD5 131 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 HERVK_113P61574 105 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 IL17RELQ6ZVW7 336 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 MDFICQ9P1T7 246 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHV3-30P01768 117 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHV3-30-5P0DP03 117 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 Q6ZS46 218 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 IGLV3-9A0A075B6K5 115 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 TMEM105Q8N8V8 129 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 TIMD4Q96H15 378 aa7.26□□□□□ -1.25
SYNPO2-204ENST00000448416 FOXC1Q12948 553 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 C2orf66Q6UXQ4 117 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 CHCHD5Q9BSY4 110 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 IGKV3D-20A0A0C4DH25 116 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 PATE3B3GLJ2 98 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 DYNAPQ8N1N2 210 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 C8orf31Q8N9H6 132 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 CFAP47Q6ZTR5 3102 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 NDUFB3O43676 98 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 IGHV4-39P01824 125 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 EMP1P54849 157 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 Q1RN00 199 aa7.25□□□□□ -1.25
SYNPO2-204ENST00000448416 GFRALQ6UXV0 394 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 RAB1BQ9H0U4 201 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 LINC01620Q4KN68 170 aa7.24□□□□□ -1.25
SYNPO2-204ENST00000448416 SLC25A29Q8N8R3 303 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms