RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 LTBP2Q14767 1821 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 FOCADQ5VW36 1801 aa1.94□□□□□ -2.1
PMS1-216ENST00000447734 MYH6P13533 1939 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 MYLKQ15746 1914 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 MYOM3Q5VTT5 1437 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 FGD6Q6ZV73 1430 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 ADGRB3O60242 1522 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 A0A1W2PNU3 283 aaPredicted RBP1.93□□□□□ -2.1
PMS1-216ENST00000447734 C20orf202A1L168 122 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 A6NN06 94 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 IFITM5A6NNB3 132 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 HYPMO75409 117 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 SNAPC5O75971 98 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 MIR22HGQ0VDD5 57 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 LINC01545Q5VT33 79 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 ATP11AUNQ6ZP68 121 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 FOXI2Q6ZQN5 318 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 ZNF833PQ6ZTB9 187 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 Q6ZUT4 128 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 SNX29P2Q8IUI4 249 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 COPS9Q8WXC6 57 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 PP6455Q8WZ26 134 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 COL4A2P08572 1712 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 MYH13Q9UKX3 1938 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 SMARCA2P51531 1590 aa1.93□□□□□ -2.1
PMS1-216ENST00000447734 KIAA1549Q9HCM3 1950 aa1.92□□□□□ -2.1
PMS1-216ENST00000447734 TRAV12-2A0A075B6T6 113 aa1.92□□□□□ -2.1
PMS1-216ENST00000447734 CNBPP62633 177 aaKnown RBP1.92□□□□□ -2.1
PMS1-216ENST00000447734 MIC13Q5XKP0 118 aa1.92□□□□□ -2.1
PMS1-216ENST00000447734 TEX261Q6UWH6 196 aa1.92□□□□□ -2.1
PMS1-216ENST00000447734 FP248Q71RG6 208 aaPredicted RBP1.92□□□□□ -2.1
PMS1-216ENST00000447734 ATP6V0E2Q8NHE4 81 aa1.92□□□□□ -2.1
PMS1-216ENST00000447734 C14orf144Q96I85 54 aa1.92□□□□□ -2.1
PMS1-216ENST00000447734 SNRNP25Q9BV90 132 aaKnown RBP1.92□□□□□ -2.1
PMS1-216ENST00000447734 RERGLQ9H628 205 aa1.92□□□□□ -2.1
PMS1-216ENST00000447734 NOP16Q9Y3C1 178 aaKnown RBP1.92□□□□□ -2.1
PMS1-216ENST00000447734 DISP1Q96F81 1524 aa1.91□□□□□ -2.1
PMS1-216ENST00000447734 MBD5Q9P267 1494 aa1.91□□□□□ -2.1
PMS1-216ENST00000447734 TRBV6-8A0A0A6YYG3 113 aa1.91□□□□□ -2.1
PMS1-216ENST00000447734 SPAARA0A1B0GVQ0 90 aa1.91□□□□□ -2.1
PMS1-216ENST00000447734 RBP2P50120 134 aa1.91□□□□□ -2.1
PMS1-216ENST00000447734 KRTAP10-8P60410 259 aa1.91□□□□□ -2.1
PMS1-216ENST00000447734 ZCCHC23Q6ZST2 131 aa1.91□□□□□ -2.1
PMS1-216ENST00000447734 C5orf17Q8NAS9 161 aa1.91□□□□□ -2.1
PMS1-216ENST00000447734 HELZP42694 1942 aaKnown RBP1.9□□□□□ -2.11
PMS1-216ENST00000447734 CCDC179H3BU77 68 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 J3QLW9 94 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 PITX3O75364 302 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 IGKV4-1P06312 121 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 SMIM6P0DI80 62 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 HIST1H1DP16402 221 aaKnown RBP1.9□□□□□ -2.11
PMS1-216ENST00000447734 GNG4P50150 75 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 BTG2P78543 158 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 KRTAP26-1Q6PEX3 210 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 OR10AG1Q8NH19 301 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 PPP3R2Q96LZ3 170 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 SEC11CQ9BY50 192 aa1.9□□□□□ -2.11
PMS1-216ENST00000447734 BOKQ9UMX3 212 aaPredicted RBP1.9□□□□□ -2.11
PMS1-216ENST00000447734 BCL9LQ86UU0 1499 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 COL24A1Q17RW2 1714 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 MYH9P35579 1960 aaKnown RBP1.89□□□□□ -2.11
PMS1-216ENST00000447734 ZFHX2Q9C0A1 2572 aaPredicted RBP1.89□□□□□ -2.11
PMS1-216ENST00000447734 F8W1H4 67 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 CCL16O15467 120 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 FREM3P0C091 2139 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 FAM74A1Q5RGS3 127 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 C10orf55Q5SWW7 151 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 BRD3OSQ6XYD6 125 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 SLC25A26Q70HW3 274 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 COA5Q86WW8 74 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 LINC00052Q96N35 136 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 AGPAT4-IT1Q9H0P7 198 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 NAA60Q9H7X0 242 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 COA4Q9NYJ1 87 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 ORMDL1Q9P0S3 153 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 ERBINQ96RT1 1412 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 USP54Q70EL1 1684 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 KIF13AQ9H1H9 1805 aa1.89□□□□□ -2.11
PMS1-216ENST00000447734 MED12LQ86YW9 2145 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 COX7CP15954 63 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 ADCYAP1P18509 176 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 TPPP2P59282 170 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 PPP3R1P63098 170 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 C3orf62Q6ZUJ4 267 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 KRTAP5-5Q701N2 237 aaPredicted RBP1.88□□□□□ -2.11
PMS1-216ENST00000447734 VSTM2AQ8TAG5 236 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 DYNLRB2Q8TF09 96 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 PATE1Q8WXA2 126 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 TAS2R8Q9NYW2 309 aa1.88□□□□□ -2.11
PMS1-216ENST00000447734 LAMB4A4D0S4 1761 aa1.87□□□□□ -2.11
PMS1-216ENST00000447734 CCNB3Q8WWL7 1395 aa1.87□□□□□ -2.11
PMS1-216ENST00000447734 TRBV6-5A0A0K0K1A5 114 aa1.87□□□□□ -2.11
PMS1-216ENST00000447734 H3BRM9 83 aa1.87□□□□□ -2.11
PMS1-216ENST00000447734 OR2T2Q6IF00 324 aa1.87□□□□□ -2.11
PMS1-216ENST00000447734 MUC4Q99102 2169 aa1.87□□□□□ -2.11
PMS1-216ENST00000447734 KLK9Q9UKQ9 250 aa1.87□□□□□ -2.11
PMS1-216ENST00000447734 ZFP30Q9Y2G7 519 aa1.87□□□□□ -2.11
PMS1-216ENST00000447734 MRC2Q9UBG0 1479 aa1.87□□□□□ -2.11
PMS1-216ENST00000447734 COL4A5P29400 1685 aa1.86□□□□□ -2.11
PMS1-216ENST00000447734 RTTNQ86VV8 2226 aa1.86□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms