RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 CSDC2Q9Y534 153 aaKnown RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 INSIG2Q9Y5U4 225 aa3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 RAI1Q7Z5J4 1906 aaPredicted RBP3.25□□□□□ -1.89
HMGB1P16-201ENST00000447155 DYSFO75923 2080 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 TET2Q6N021 2002 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRAV8-2A0A0B4J237 113 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRAV8-4A0A0B4J246 113 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRBV6-1A0A0K0K1D8 114 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 FAM240AA0A1B0GVK7 77 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR2H2O95918 312 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 RBP4P02753 201 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 FCER1GP30273 86 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZNF137PP52743 207 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 DSCR4P56555 118 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 HERVK_113P61574 105 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ESPL1Q14674 2120 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 C12orf74Q32Q52 190 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 SPINK9Q5DT21 86 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 MEIG1Q5JSS6 88 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 GDF5OSQ5U4N7 250 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZNF493Q6ZR52 646 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 LINC00173Q6ZV60 143 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 AAED1Q7RTV5 226 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 SH2D6Q7Z4S9 175 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 CD177Q8N6Q3 437 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR1L8Q8NGR8 309 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ZC2HC1AQ96GY0 325 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 SLC25A39Q9BZJ4 359 aaPredicted RBP3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 PPDPFQ9H3Y8 114 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 ONECUT1Q9UBC0 465 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 GNG12Q9UBI6 72 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 Q9UF83 564 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 EPDR1Q9UM22 224 aa3.24□□□□□ -1.89
HMGB1P16-201ENST00000447155 A0A087WX48 190 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 LOC107984156A0A0G2JMH3 177 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C5orf49A4QMS7 147 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C5orf63A6NC05 138 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C19orf71A6NCJ1 209 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 SMIM9A6NGZ8 99 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 LINC01549A6NIU2 74 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C17orf98A8MV24 154 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 K7ENP7 123 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 CDX4O14627 284 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 SCRG1O75711 98 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 EMP1P54849 157 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 KRTAP10-12P60413 245 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 HSPE1P61604 102 aaKnown RBP3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 PPP1CAP62136 330 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 ERHP84090 104 aaKnown RBP3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRCDQ00LT1 54 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 MYO9BQ13459 2157 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 EIF4EBP1Q13541 118 aaPredicted RBP3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 LAGE3Q14657 143 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C2orf83Q53S99 150 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 C9orf153Q5TBE3 101 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 ALPK2Q86TB3 2170 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 PCP2Q8IVA1 136 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 ARL17AQ8IVW1 177 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 LINC01561Q8N1V8 128 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM75Q8N9X5 138 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 TMEM158Q8WZ71 300 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 VSIG2Q96IQ7 327 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 DEFB126Q9BYW3 111 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 OTORQ9NRC9 128 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 SPRR3Q9UBC9 169 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 SMAD5-AS1Q9Y6J3 95 aa3.23□□□□□ -1.89
HMGB1P16-201ENST00000447155 NOTCH3Q9UM47 2321 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 RP1P56715 2156 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 PRRC2BQ5JSZ5 2229 aaKnown RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 USF3Q68DE3 2245 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 DIDO1Q9BTC0 2240 aaKnown RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 IGLV8-61A0A075B6I0 122 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 TRAV2A0A0B4J234 112 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 MYMXA0A1B0GTQ4 84 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 FAM168BA1KXE4 195 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 PGPA6NDG6 321 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 C12orf77C9JDV5 145 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 D6R8Y8 96 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 H3BMM0 161 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 CCDC179H3BU77 68 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 H3BVH4 76 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 NCR2O95944 276 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 NPYP01303 97 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 TCRAP04437 139 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 LGALS1P09382 135 aaKnown RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 GIG44P09565 113 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 SLC25A16P16260 332 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 IFI27P40305 119 aaPredicted RBP3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 PSMB2P49721 201 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 PMVKQ15126 192 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 ATXN8Q156A1 80 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 SCGB1D4Q6XE38 83 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 C10orf126Q8N4M7 172 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 ANKRD29Q8N6D5 301 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 OR4C13Q8NGP0 309 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 CCL4L1Q8NHW4 92 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 UBE2WQ96B02 151 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 KIR2DL4Q99706 377 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 FOXC2Q99958 501 aa3.22□□□□□ -1.89
HMGB1P16-201ENST00000447155 IMUPQ9GZP8 106 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms