RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 BCL2P10415 239 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 PLCXD2Q0VAA5 305 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 C1orf140Q5VVS0 124 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 C22orf39Q6P5X5 142 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 DEFB124Q8NES8 71 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 LZICQ8WZA0 190 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 TVP23CQ96ET8 276 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 BORCS8Q96FH0 119 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 Q9BRP9 147 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 TMEM126AQ9H061 195 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 NDUFB11Q9NX14 153 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 GSKIPQ9P0R6 139 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 CCL26Q9Y258 94 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 MYH7BA7E2Y1 1941 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 PCNX2A6NKB5 2137 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 APCP25054 2843 aa2.3□□□□□ -2.04
HMGB1P48-201ENST00000446155 MALRD1Q5VYJ5 2156 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 MYO16Q9Y6X6 1858 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 A0A087WX48 190 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 H7BYZ3 331 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 DEGS1O15121 323 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 RNASE2P10153 161 aaKnown RBP2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 LGALS3P17931 250 aaKnown RBP2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 RPS3P23396 243 aaKnown RBP eCLIP2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 FKBP2P26885 142 aaKnown RBP2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 S100A11P31949 105 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 HINT1P49773 126 aaPredicted RBP2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 DYNLT3P51808 116 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 LCN15Q6UWW0 184 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 DHFR2Q86XF0 187 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 PRR15Q8IV56 129 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 IFT20Q8IY31 132 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 LYPD1Q8N2G4 141 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 BORCS5Q969J3 196 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 YIPF3Q9GZM5 350 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 OTORQ9NRC9 128 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 SPANXCQ9NY87 97 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 MED31Q9Y3C7 131 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 JMJD1CQ15652 2540 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 ARHGAP32A7KAX9 2087 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 MICAL3Q7RTP6 2002 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 SHROOM3Q8TF72 1996 aa2.29□□□□□ -2.04
HMGB1P48-201ENST00000446155 DOCK2Q92608 1830 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 SPEF2Q9C093 1822 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 COL6A5A8TX70 2615 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 AKAP9Q99996 3911 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 ODAMA1E959 279 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 C7orf71A4D174 169 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 ARRDC5A6NEK1 342 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 OR51F1A6NGY5 319 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 E7EQL1 145 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 J3KT08 172 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 CLPSP04118 112 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 METTL15P1P0C7V9 234 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 TRGC1P0CF51 173 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 CRYGAP11844 174 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 COX6A1P12074 109 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 TMEM258P61165 79 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 ERHP84090 104 aaKnown RBP2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 RHOGP84095 191 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 RELAQ04206 551 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 NDUFA5Q16718 116 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 ZNF791Q3KP31 576 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 HRCT1Q6UXD1 115 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 WFDC11Q8NEX6 87 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 OR4E2Q8NGC2 313 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 OR4X2Q8NGF9 303 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 OR4D11Q8NGI4 311 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 C20orf166-AS1Q96NR2 134 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 SLC25A21Q9BQT8 299 aaPredicted RBP2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 PRADC1Q9BSG0 188 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 POPDC3Q9HBV1 291 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 RASL12Q9NYN1 266 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 TRAPPC2LQ9UL33 140 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 BAIAP2Q9UQB8 552 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 HIVEP3Q5T1R4 2406 aa2.28□□□□□ -2.04
HMGB1P48-201ENST00000446155 NBEAL2Q6ZNJ1 2754 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 CCDC168Q8NDH2 2452 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 OBSL1O75147 1896 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 PRRC2CQ9Y520 2896 aaKnown RBP2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 COL11A1P12107 1806 aaPredicted RBP2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 TMSB15BA0A087X1C1 80 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 FNDC10F2Z333 226 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 GABARAPH6UMI1 98 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 OVOL1O14753 267 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 NDUFB3O43676 98 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 CXCL1P09341 107 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 FUSP35637 526 aaKnown RBP eCLIP2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 TMBIM6P55061 237 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 EIF3IQ13347 325 aaKnown RBP2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 MSMO1Q15800 293 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 PDZD9Q8IXQ8 264 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 C3orf56Q8N813 242 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 OR2T10Q8NGZ9 312 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 AQP3Q92482 292 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 ADAT1Q9BUB4 502 aaKnown RBP2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 NPCDR1Q9BY65 106 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 FAM107BQ9H098 131 aa2.27□□□□□ -2.05
HMGB1P48-201ENST00000446155 TMEM138Q9NPI0 162 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms