RNA–Protein interactions for RNA: ENST00000445902.2

VPS52-212, Transcript of VPS52, GARP complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS52, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-212ENST00000445902 CD59P13987 128 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 LAGE3Q14657 143 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 TAL2Q16559 108 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 PSMG4Q5JS54 123 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 DYNAPQ8N1N2 210 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 OR11H1Q8NG94 326 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 OR11H2Q8NH07 326 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 CFHR4Q92496 578 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 RNF183Q96D59 192 aa10.82□□□□□ -0.68
VPS52-212ENST00000445902 LINC01546A6NGU7 62 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 BUB1B-PAK6H3BSN5 160 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 HLA-DRB4P13762 266 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 CFAP126Q5VTH2 177 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 Q6ZQT7 251 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 IL17RELQ6ZVW7 336 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 HLA-DRB4X5D2U9 266 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 DCHS2Q6V1P9 2916 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 APC2O95996 2303 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 IGHG4P01861 327 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 THBDP07204 575 aa10.81□□□□□ -0.68
VPS52-212ENST00000445902 ZNF48Q96MX3 618 aaPredicted RBP10.81□□□□□ -0.68
VPS52-212ENST00000445902 MYMXA0A1B0GTQ4 84 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 FABP5P3A8MUU1 101 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 SPRY2O43597 315 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 Q6ZUT4 128 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 LYNX1G3V0Z9 82 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 IGLV1-47P01700 117 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 LYNX1P0DP58 116 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 SS18L2Q9UHA2 77 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 SMAD5-AS1Q9Y6J3 95 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 IGHV3-66A0A0C4DH42 116 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 BSPH1Q075Z2 132 aa10.8□□□□□ -0.68
VPS52-212ENST00000445902 DLX4Q92988 240 aaPredicted RBP10.8□□□□□ -0.68
VPS52-212ENST00000445902 MED13LQ71F56 2210 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 TIMM23O14925 209 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 LGALS1P09382 135 aaKnown RBP10.79□□□□□ -0.68
VPS52-212ENST00000445902 C11orf21Q9P2W6 132 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 IGHV3OR16-13A0A075B7E8 117 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 IGHV3-74A0A0B4J1X5 117 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 H3BVH4 76 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 PLNP26678 52 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 KLRD1Q13241 179 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 DEFB109BQ30KR1 87 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 DEFB104AQ8WTQ1 72 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 VKORC1Q9BQB6 163 aa10.79□□□□□ -0.68
VPS52-212ENST00000445902 EP300Q09472 2414 aaPredicted RBP10.78□□□□□ -0.68
VPS52-212ENST00000445902 IGKV3D-20A0A0C4DH25 116 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 RPL7P18124 248 aaKnown RBP10.78□□□□□ -0.68
VPS52-212ENST00000445902 SCGB1D4Q6XE38 83 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 NRACQ8N912 160 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 PLEKHB2Q96CS7 222 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 ABCA4P78363 2273 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 RELNP78509 3460 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 TNFRSF13BO14836 293 aaPredicted RBP10.78□□□□□ -0.68
VPS52-212ENST00000445902 SRSF9Q13242 221 aaKnown RBP eCLIP10.78□□□□□ -0.68
VPS52-212ENST00000445902 TMEM78Q5T7P6 136 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 KIR2DL4Q99706 377 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 CNFNQ9BYD5 112 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 PIEZO2Q9H5I5 2752 aa10.78□□□□□ -0.68
VPS52-212ENST00000445902 CARD19Q96LW7 228 aa10.77□□□□□ -0.68
VPS52-212ENST00000445902 PSMG3-AS1Q96PY0 264 aa10.77□□□□□ -0.68
VPS52-212ENST00000445902 SRSF8Q9BRL6 282 aaKnown RBP10.77□□□□□ -0.68
VPS52-212ENST00000445902 ONECUT1Q9UBC0 465 aa10.77□□□□□ -0.68
VPS52-212ENST00000445902 RAXQ9Y2V3 346 aa10.77□□□□□ -0.68
VPS52-212ENST00000445902 PRSS29PA6NIE9 313 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 F8VRH5 84 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 F8W735 103 aaPredicted RBP10.77□□□□□ -0.69
VPS52-212ENST00000445902 TSPAN13O95857 204 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 HES1Q14469 280 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 DYNLRB1Q9NP97 96 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 ZNF815PA8K554 130 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 H7C1H1 209 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 MFAP4P55083 255 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 COX8CQ7Z4L0 72 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 KLHL30-AS1Q8NEE0 82 aa10.77□□□□□ -0.69
VPS52-212ENST00000445902 CDX4O14627 284 aaPredicted RBP10.76□□□□□ -0.69
VPS52-212ENST00000445902 NUP37Q8NFH4 326 aa10.76□□□□□ -0.69
VPS52-212ENST00000445902 FANCD2OSQ96PS1 177 aa10.76□□□□□ -0.69
VPS52-212ENST00000445902 SCGB3A1Q96QR1 104 aa10.76□□□□□ -0.69
VPS52-212ENST00000445902 PRADC1Q9BSG0 188 aa10.76□□□□□ -0.69
VPS52-212ENST00000445902 RAB1BQ9H0U4 201 aa10.76□□□□□ -0.69
VPS52-212ENST00000445902 J3KRW8 73 aa10.76□□□□□ -0.69
VPS52-212ENST00000445902 ZNF883P0CG24 379 aa10.76□□□□□ -0.69
VPS52-212ENST00000445902 ASCL5Q7RTU5 278 aa10.76□□□□□ -0.69
VPS52-212ENST00000445902 EMP1P54849 157 aa10.75□□□□□ -0.69
VPS52-212ENST00000445902 IGHV3-49A0A0A0MS15 119 aa10.75□□□□□ -0.69
VPS52-212ENST00000445902 C3orf36Q3SXR2 165 aa10.75□□□□□ -0.69
VPS52-212ENST00000445902 LINC01559Q495D7 138 aa10.75□□□□□ -0.69
VPS52-212ENST00000445902 SPANXN1Q5VSR9 72 aa10.75□□□□□ -0.69
VPS52-212ENST00000445902 ANAPC13Q9BS18 74 aa10.75□□□□□ -0.69
VPS52-212ENST00000445902 C21orf62Q9NYP8 219 aa10.75□□□□□ -0.69
VPS52-212ENST00000445902 SLC25A16P16260 332 aa10.74□□□□□ -0.69
VPS52-212ENST00000445902 ANXA2RQ3ZCQ2 193 aa10.74□□□□□ -0.69
VPS52-212ENST00000445902 NBR2O15453 112 aa10.74□□□□□ -0.69
VPS52-212ENST00000445902 RALYQ9UKM9 306 aaKnown RBP10.74□□□□□ -0.69
VPS52-212ENST00000445902 ERG28Q9UKR5 140 aa10.74□□□□□ -0.69
VPS52-212ENST00000445902 FAM90A27PA6NNH2 459 aa10.73□□□□□ -0.69
VPS52-212ENST00000445902 TCL1BO95988 128 aa10.73□□□□□ -0.69
VPS52-212ENST00000445902 NDPQ00604 133 aa10.73□□□□□ -0.69
VPS52-212ENST00000445902 ATP6V0E2Q8NHE4 81 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms