RNA–Protein interactions for RNA: ENST00000445593.6

LAPTM4B-201, Transcript of lysosomal protein transmembrane 4 beta, humanhuman

TSL 1 (best) BASIC

Gene LAPTM4B, Length 3,173 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4B-201ENST00000445593 OR10J3Q5JRS4 329 aa12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 SAMD13Q5VXD3 122 aa12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 NF1P21359 2839 aa12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 TENM4Q6N022 2769 aa12.94□□□□□ -0.34
LAPTM4B-201ENST00000445593 TMEM189A5PLL7 270 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 PRR25Q96S07 402 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 ITPR3Q14573 2671 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 H0Y8G0 127 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 Q6ZQT7 251 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 IL17RELQ6ZVW7 336 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 WIPF2Q8TF74 440 aaPredicted RBP12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 TRAV26-1A0A087WT03 109 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 TRBV7-1A0A0A6YYK4 115 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 A0A1B0GUT8 65 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 M0R2Z0 102 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 LYZL1Q6UWQ5 148 aa12.93□□□□□ -0.34
LAPTM4B-201ENST00000445593 NPIPB6E9PJ23 425 aa12.92□□□□□ -0.34
LAPTM4B-201ENST00000445593 EDN2P20800 178 aa12.92□□□□□ -0.34
LAPTM4B-201ENST00000445593 SMAD7O15105 426 aaKnown RBP12.92□□□□□ -0.34
LAPTM4B-201ENST00000445593 WNK1Q9H4A3 2382 aa12.92□□□□□ -0.34
LAPTM4B-201ENST00000445593 A6NDX4 124 aa12.91□□□□□ -0.34
LAPTM4B-201ENST00000445593 ATP5L2Q7Z4Y8 100 aa12.91□□□□□ -0.34
LAPTM4B-201ENST00000445593 CT83Q5H943 113 aa12.91□□□□□ -0.34
LAPTM4B-201ENST00000445593 FAM162BQ5T6X4 162 aa12.91□□□□□ -0.34
LAPTM4B-201ENST00000445593 C8orf86Q6ZUL3 223 aa12.91□□□□□ -0.34
LAPTM4B-201ENST00000445593 NIT1Q86X76 327 aa12.91□□□□□ -0.34
LAPTM4B-201ENST00000445593 GAGE12BA1L429 117 aa12.91□□□□□ -0.34
LAPTM4B-201ENST00000445593 HIST2H2BDQ6DRA6 164 aa12.91□□□□□ -0.34
LAPTM4B-201ENST00000445593 C16orf92Q96LL3 132 aa12.91□□□□□ -0.34
LAPTM4B-201ENST00000445593 FBLL1A6NHQ2 334 aaKnown RBP12.9□□□□□ -0.34
LAPTM4B-201ENST00000445593 OR4X2Q8NGF9 303 aa12.9□□□□□ -0.34
LAPTM4B-201ENST00000445593 MCRIP2Q9BUT9 160 aaKnown RBP12.9□□□□□ -0.34
LAPTM4B-201ENST00000445593 OR4B1Q8NGF8 309 aa12.9□□□□□ -0.34
LAPTM4B-201ENST00000445593 BORCS7Q96B45 105 aa12.9□□□□□ -0.34
LAPTM4B-201ENST00000445593 NOTCH3Q9UM47 2321 aa12.9□□□□□ -0.34
LAPTM4B-201ENST00000445593 LOC389332A0A1B0GUA5 103 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 C3orf79P0CE67 100 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 RASL11AQ6T310 242 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 SHISA2Q6UWI4 295 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 GLMPQ8WWB7 406 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 ITPR2Q14571 2701 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 IGHG2P01859 326 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 ESDP10768 282 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 TM4SF20Q53R12 229 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 LINC01356Q8N9X3 169 aa12.89□□□□□ -0.35
LAPTM4B-201ENST00000445593 SMKR1H3BMG3 65 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 SPRY2O43597 315 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 CRYBA4P53673 196 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 FXYD7P58549 80 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 LINC00173Q6ZV60 143 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 URB1-AS1Q96HZ7 61 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 GFRA4Q9GZZ7 299 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 MSRB1Q9NZV6 116 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 WFDC3Q8IUB2 231 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 AMN1Q8IY45 258 aa12.88□□□□□ -0.35
LAPTM4B-201ENST00000445593 TRAV8-2A0A0B4J237 113 aa12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 TWIST1Q15672 202 aa12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 NDFIP1Q9BT67 221 aa12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 AGPAT4-IT1Q9H0P7 198 aa12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 F6UB75 175 aa12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 IGF1P05019 195 aa12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 RIGQ13278 110 aa12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 BEX4Q9NWD9 120 aaPredicted RBP12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 FAM223BA6NKX1 122 aa12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 FAM223AQ8IWN6 122 aa12.87□□□□□ -0.35
LAPTM4B-201ENST00000445593 NCR2O95944 276 aa12.86□□□□□ -0.35
LAPTM4B-201ENST00000445593 C19orf54Q5BKX5 351 aa12.86□□□□□ -0.35
LAPTM4B-201ENST00000445593 RAB9AP51151 201 aa12.86□□□□□ -0.35
LAPTM4B-201ENST00000445593 UQCR10Q9UDW1 63 aa12.86□□□□□ -0.35
LAPTM4B-201ENST00000445593 HAX1O00165 279 aa12.85□□□□□ -0.35
LAPTM4B-201ENST00000445593 SLC25A16P16260 332 aa12.85□□□□□ -0.35
LAPTM4B-201ENST00000445593 C20orf173Q96LM9 149 aa12.85□□□□□ -0.35
LAPTM4B-201ENST00000445593 FOXE3Q13461 319 aa12.85□□□□□ -0.35
LAPTM4B-201ENST00000445593 TMEM78Q5T7P6 136 aa12.85□□□□□ -0.35
LAPTM4B-201ENST00000445593 EBLN2Q6P2I7 272 aa12.85□□□□□ -0.35
LAPTM4B-201ENST00000445593 HECTD1Q9ULT8 2610 aa12.85□□□□□ -0.35
LAPTM4B-201ENST00000445593 TRBV6-1A0A0K0K1D8 114 aa12.85□□□□□ -0.35
LAPTM4B-201ENST00000445593 FAM181BA6NEQ2 426 aa12.84□□□□□ -0.35
LAPTM4B-201ENST00000445593 D6R8Y8 96 aa12.84□□□□□ -0.35
LAPTM4B-201ENST00000445593 FER1L6-AS1Q8NA97 138 aa12.84□□□□□ -0.35
LAPTM4B-201ENST00000445593 MPV17L2Q567V2 206 aa12.84□□□□□ -0.35
LAPTM4B-201ENST00000445593 Q96MF0 132 aa12.84□□□□□ -0.35
LAPTM4B-201ENST00000445593 PMCHL2Q9BQD1 86 aa12.84□□□□□ -0.35
LAPTM4B-201ENST00000445593 NPFFR1Q9GZQ6 430 aa12.84□□□□□ -0.35
LAPTM4B-201ENST00000445593 RPL24P83731 157 aaKnown RBP12.83□□□□□ -0.35
LAPTM4B-201ENST00000445593 SLC50A1Q9BRV3 221 aa12.83□□□□□ -0.35
LAPTM4B-201ENST00000445593 FAM231BA6NCW3 169 aa12.83□□□□□ -0.36
LAPTM4B-201ENST00000445593 FAM106AQ4KMX7 169 aa12.83□□□□□ -0.36
LAPTM4B-201ENST00000445593 TEX43Q6ZNM6 134 aa12.83□□□□□ -0.36
LAPTM4B-201ENST00000445593 Q8N976 141 aa12.83□□□□□ -0.36
LAPTM4B-201ENST00000445593 KLF5Q13887 457 aaPredicted RBP12.83□□□□□ -0.36
LAPTM4B-201ENST00000445593 C11orf21Q9P2W6 132 aa12.83□□□□□ -0.36
LAPTM4B-201ENST00000445593 IGHV1-24A0A0C4DH33 117 aa12.82□□□□□ -0.36
LAPTM4B-201ENST00000445593 IGLC3P0DOY3 106 aa12.82□□□□□ -0.36
LAPTM4B-201ENST00000445593 AZU1P20160 251 aa12.82□□□□□ -0.36
LAPTM4B-201ENST00000445593 TSPOP30536 169 aa12.82□□□□□ -0.36
LAPTM4B-201ENST00000445593 DSCR9P59020 149 aa12.82□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 3469.5 ms