RNA–Protein interactions for RNA: ENST00000444058.1

ATPAF2-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 3

Gene ATPAF2, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-201ENST00000444058 EIF3GO75821 320 aaKnown RBP eCLIP13.16□□□□□ -0.3
ATPAF2-201ENST00000444058 NUDT3O95989 172 aa13.16□□□□□ -0.3
ATPAF2-201ENST00000444058 CCL18P55774 89 aa13.16□□□□□ -0.3
ATPAF2-201ENST00000444058 OR5I1Q13606 314 aa13.16□□□□□ -0.3
ATPAF2-201ENST00000444058 Q6AWC8 147 aa13.16□□□□□ -0.3
ATPAF2-201ENST00000444058 SUN5Q8TC36 379 aa13.16□□□□□ -0.3
ATPAF2-201ENST00000444058 RAB24Q969Q5 203 aa13.16□□□□□ -0.3
ATPAF2-201ENST00000444058 GNPNAT1Q96EK6 184 aaPredicted RBP13.16□□□□□ -0.3
ATPAF2-201ENST00000444058 TRAV26-1A0A087WT03 109 aa13.15□□□□□ -0.3
ATPAF2-201ENST00000444058 ARL14EPLP0DKL9 152 aa13.15□□□□□ -0.3
ATPAF2-201ENST00000444058 HOXA5P20719 270 aa13.15□□□□□ -0.3
ATPAF2-201ENST00000444058 ST6GAL2Q96JF0 529 aa13.15□□□□□ -0.3
ATPAF2-201ENST00000444058 KLF12Q9Y4X4 402 aa13.15□□□□□ -0.3
ATPAF2-201ENST00000444058 TRGV2A0A075B6R0 118 aa13.14□□□□□ -0.31
ATPAF2-201ENST00000444058 FXYD6-FXYD2A0A087WZ82 144 aa13.14□□□□□ -0.31
ATPAF2-201ENST00000444058 BORCS7-ASMTA0A0B4J1R7 106 aa13.14□□□□□ -0.31
ATPAF2-201ENST00000444058 SERTM2A0A1B0GWG4 89 aa13.14□□□□□ -0.31
ATPAF2-201ENST00000444058 M0R2N4 97 aa13.14□□□□□ -0.31
ATPAF2-201ENST00000444058 HMGB3O15347 200 aaKnown RBP13.14□□□□□ -0.31
ATPAF2-201ENST00000444058 ARPC5LQ9BPX5 153 aa13.14□□□□□ -0.31
ATPAF2-201ENST00000444058 TMPRSS5Q9H3S3 457 aa13.14□□□□□ -0.31
ATPAF2-201ENST00000444058 DNAH2Q9P225 4427 aa13.13□□□□□ -0.31
ATPAF2-201ENST00000444058 TRGV1A0A0A0MS02 117 aa13.13□□□□□ -0.31
ATPAF2-201ENST00000444058 Q6ZQT7 251 aa13.13□□□□□ -0.31
ATPAF2-201ENST00000444058 ACTR3CQ9C0K3 210 aaPredicted RBP13.13□□□□□ -0.31
ATPAF2-201ENST00000444058 TMEM167BQ9NRX6 74 aa13.13□□□□□ -0.31
ATPAF2-201ENST00000444058 TP53TG3Q9ULZ0 132 aa13.13□□□□□ -0.31
ATPAF2-201ENST00000444058 IGLV2-18A0A075B6J9 118 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 CXorf1O96002 111 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 GCHFRP30047 84 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 ZNF415Q09FC8 603 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 TDRG1Q3Y452 100 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 RPL7L1Q6DKI1 246 aaKnown RBP13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 GOLT1AQ6ZVE7 132 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 C5orf17Q8NAS9 161 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 ZNRF2Q8NHG8 242 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 SH3BGRL3Q9H299 93 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 NACAE9PAV3 2078 aa13.12□□□□□ -0.31
ATPAF2-201ENST00000444058 G3V3Q6 166 aa13.11□□□□□ -0.31
ATPAF2-201ENST00000444058 TAAR5O14804 337 aa13.11□□□□□ -0.31
ATPAF2-201ENST00000444058 RTL8CO15255 209 aa13.11□□□□□ -0.31
ATPAF2-201ENST00000444058 SOHLH1Q5JUK2 328 aa13.11□□□□□ -0.31
ATPAF2-201ENST00000444058 FAM159AQ6UWV7 190 aa13.11□□□□□ -0.31
ATPAF2-201ENST00000444058 LINC00588Q9Y4M8 146 aa13.11□□□□□ -0.31
ATPAF2-201ENST00000444058 RPH3ALQ9UNE2 315 aa13.1□□□□□ -0.31
ATPAF2-201ENST00000444058 FAT2Q9NYQ8 4349 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 HECTD4Q9Y4D8 3996 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 TRGV11A0A075B6L2 103 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 A0A0J9YY99 117 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 K7EQM0 130 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 TCRAP04437 139 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 MUC21Q5SSG8 566 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 SSX7Q7RTT5 188 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 SPXQ9BT56 116 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 TREM1Q9NP99 234 aa13.09□□□□□ -0.31
ATPAF2-201ENST00000444058 TRAV8-1A0A0A6YYK1 113 aa13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 TRAV21A0A0B4J279 112 aa13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 FBLL1A6NHQ2 334 aaKnown RBP13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 PRSS29PA6NIE9 313 aa13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 GNG5P63218 68 aa13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 SLAQ13239 276 aa13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 RASL10AQ92737 203 aa13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 TVP23CQ96ET8 276 aa13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 VSIG2Q96IQ7 327 aa13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 MDFICQ9P1T7 246 aa13.08□□□□□ -0.32
ATPAF2-201ENST00000444058 NBDYA0A0U1RRE5 68 aa13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 A0A1B0GVY2 172 aa13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 A0A1W2PRE2 83 aa13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 ARPC5O15511 151 aa13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 C1orf134Q5TEV5 83 aa13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 NDFIP1Q9BT67 221 aa13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 UPK3BQ9BT76 320 aa13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 MRPL16Q9NX20 251 aaKnown RBP13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 MUC4Q99102 2169 aa13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 DNAH17Q9UFH2 4485 aa13.07□□□□□ -0.32
ATPAF2-201ENST00000444058 CTXND1A0A1B0GTU2 59 aa13.06□□□□□ -0.32
ATPAF2-201ENST00000444058 SUMO1P63165 101 aaKnown RBP13.06□□□□□ -0.32
ATPAF2-201ENST00000444058 TMEM183BQ1AE95 376 aa13.06□□□□□ -0.32
ATPAF2-201ENST00000444058 TMEM183AQ8IXX5 376 aa13.06□□□□□ -0.32
ATPAF2-201ENST00000444058 KCNS1Q96KK3 526 aa13.06□□□□□ -0.32
ATPAF2-201ENST00000444058 EPDR1Q9UM22 224 aa13.06□□□□□ -0.32
ATPAF2-201ENST00000444058 GGTLC3B5MD39 225 aa13.05□□□□□ -0.32
ATPAF2-201ENST00000444058 ZNF345Q14585 488 aa13.05□□□□□ -0.32
ATPAF2-201ENST00000444058 ZNF726P1Q15940 193 aa13.05□□□□□ -0.32
ATPAF2-201ENST00000444058 ESRGQ1W209 222 aa13.05□□□□□ -0.32
ATPAF2-201ENST00000444058 IQCF2Q8IXL9 164 aa13.05□□□□□ -0.32
ATPAF2-201ENST00000444058 CYB561D1Q8N8Q1 229 aa13.05□□□□□ -0.32
ATPAF2-201ENST00000444058 Q9H8V8 135 aa13.05□□□□□ -0.32
ATPAF2-201ENST00000444058 CYTL1Q9NRR1 136 aa13.05□□□□□ -0.32
ATPAF2-201ENST00000444058 PRO0255Q9UI72 69 aa13.05□□□□□ -0.32
ATPAF2-201ENST00000444058 A0A096LPF7 62 aa13.04□□□□□ -0.32
ATPAF2-201ENST00000444058 IGLV2-11P01706 119 aa13.04□□□□□ -0.32
ATPAF2-201ENST00000444058 AKR1C8PQ5T2L2 129 aa13.04□□□□□ -0.32
ATPAF2-201ENST00000444058 TMEM75Q8N9X5 138 aa13.04□□□□□ -0.32
ATPAF2-201ENST00000444058 NKX6-2Q9C056 277 aaPredicted RBP13.04□□□□□ -0.32
ATPAF2-201ENST00000444058 NAGKQ9UJ70 344 aa13.04□□□□□ -0.32
ATPAF2-201ENST00000444058 MRPS16Q9Y3D3 137 aaKnown RBP13.04□□□□□ -0.32
ATPAF2-201ENST00000444058 IGHV3-16A0A0C4DH30 117 aa13.03□□□□□ -0.32
ATPAF2-201ENST00000444058 F6UZH7 168 aa13.03□□□□□ -0.32
ATPAF2-201ENST00000444058 PAX4O43316 350 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms