RNA–Protein interactions for RNA: ENST00000440271.5

TRIM39-210, Transcript of tripartite motif containing 39, humanhuman

TSL 3

Gene TRIM39, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-210ENST00000440271 MUC21Q5SSG8 566 aa13.74□□□□□ -0.21
TRIM39-210ENST00000440271 FAM122CQ6P4D5 195 aa13.74□□□□□ -0.21
TRIM39-210ENST00000440271 SYT8Q8NBV8 401 aa13.74□□□□□ -0.21
TRIM39-210ENST00000440271 C20orf85Q9H1P6 137 aa13.74□□□□□ -0.21
TRIM39-210ENST00000440271 UQCC1Q9NVA1 299 aa13.74□□□□□ -0.21
TRIM39-210ENST00000440271 LINC01556Q5JQF7 62 aa13.73□□□□□ -0.21
TRIM39-210ENST00000440271 Q9HAA7 133 aa13.73□□□□□ -0.21
TRIM39-210ENST00000440271 LOC100131303A0A0U1RQF7 123 aa13.72□□□□□ -0.21
TRIM39-210ENST00000440271 CAV2P51636 162 aa13.72□□□□□ -0.21
TRIM39-210ENST00000440271 ZNF138P52744 262 aa13.72□□□□□ -0.21
TRIM39-210ENST00000440271 TIRAPP58753 221 aa13.72□□□□□ -0.21
TRIM39-210ENST00000440271 VWC2Q2TAL6 325 aa13.72□□□□□ -0.21
TRIM39-210ENST00000440271 SH2D6Q7Z4S9 175 aa13.72□□□□□ -0.21
TRIM39-210ENST00000440271 SPXQ9BT56 116 aa13.72□□□□□ -0.21
TRIM39-210ENST00000440271 TRBV7-9A0A0J9YWB2 115 aa13.71□□□□□ -0.21
TRIM39-210ENST00000440271 NAP1L6A6NFF2 107 aa13.71□□□□□ -0.21
TRIM39-210ENST00000440271 FAM24AA6NFZ4 105 aa13.71□□□□□ -0.21
TRIM39-210ENST00000440271 NOL3O60936 208 aaKnown RBP13.71□□□□□ -0.21
TRIM39-210ENST00000440271 BAXQ07812 192 aa13.71□□□□□ -0.21
TRIM39-210ENST00000440271 Q6ZSA8 131 aa13.71□□□□□ -0.21
TRIM39-210ENST00000440271 Q8TAT8 98 aa13.71□□□□□ -0.21
TRIM39-210ENST00000440271 CHAC2Q8WUX2 184 aa13.71□□□□□ -0.21
TRIM39-210ENST00000440271 MITD1Q8WV92 249 aa13.71□□□□□ -0.21
TRIM39-210ENST00000440271 SLC25A31Q9H0C2 315 aa13.71□□□□□ -0.21
TRIM39-210ENST00000440271 GPN1Q9HCN4 374 aaPredicted RBP13.71□□□□□ -0.21
TRIM39-210ENST00000440271 LSM5Q9Y4Y9 91 aaKnown RBP13.71□□□□□ -0.21
TRIM39-210ENST00000440271 TRAV4A0A0B4J268 109 aa13.7□□□□□ -0.22
TRIM39-210ENST00000440271 UBE2L5PA0A1B0GUS4 154 aa13.7□□□□□ -0.22
TRIM39-210ENST00000440271 PPT1P50897 306 aa13.7□□□□□ -0.22
TRIM39-210ENST00000440271 LRP1Q07954 4544 aaKnown RBP13.69□□□□□ -0.22
TRIM39-210ENST00000440271 S100A5P33763 92 aa13.69□□□□□ -0.22
TRIM39-210ENST00000440271 ZNF266Q14584 549 aa13.69□□□□□ -0.22
TRIM39-210ENST00000440271 TMEM183BQ1AE95 376 aa13.69□□□□□ -0.22
TRIM39-210ENST00000440271 TMEM183AQ8IXX5 376 aa13.69□□□□□ -0.22
TRIM39-210ENST00000440271 NHLRC2Q8NBF2 726 aa13.69□□□□□ -0.22
TRIM39-210ENST00000440271 OR4C5Q8NGB2 326 aa13.69□□□□□ -0.22
TRIM39-210ENST00000440271 SLC25A2Q9BXI2 301 aa13.69□□□□□ -0.22
TRIM39-210ENST00000440271 CCSO14618 274 aa13.68□□□□□ -0.22
TRIM39-210ENST00000440271 NBEAP1P0C6P0 100 aa13.68□□□□□ -0.22
TRIM39-210ENST00000440271 ZNF846Q147U1 533 aa13.68□□□□□ -0.22
TRIM39-210ENST00000440271 GCSAMLQ5JQS6 135 aa13.68□□□□□ -0.22
TRIM39-210ENST00000440271 C11orf1Q9H5F2 150 aa13.68□□□□□ -0.22
TRIM39-210ENST00000440271 TRGV11A0A075B6L2 103 aa13.67□□□□□ -0.22
TRIM39-210ENST00000440271 TRAV8-6A0A0B4J262 113 aa13.67□□□□□ -0.22
TRIM39-210ENST00000440271 FGF7P21781 194 aa13.67□□□□□ -0.22
TRIM39-210ENST00000440271 S100A11P31949 105 aa13.67□□□□□ -0.22
TRIM39-210ENST00000440271 INPP1P49441 399 aa13.67□□□□□ -0.22
TRIM39-210ENST00000440271 FAM159AQ6UWV7 190 aa13.67□□□□□ -0.22
TRIM39-210ENST00000440271 FAM167A-AS1Q96KT0 104 aa13.67□□□□□ -0.22
TRIM39-210ENST00000440271 IGHV3-30P01768 117 aa13.66□□□□□ -0.22
TRIM39-210ENST00000440271 IGHV3-33P01772 117 aa13.66□□□□□ -0.22
TRIM39-210ENST00000440271 IGHV3-30-3P0DP02 117 aa13.66□□□□□ -0.22
TRIM39-210ENST00000440271 IGHV3-30-5P0DP03 117 aa13.66□□□□□ -0.22
TRIM39-210ENST00000440271 SULT1A1P50225 295 aa13.66□□□□□ -0.22
TRIM39-210ENST00000440271 WFDC2Q14508 124 aa13.66□□□□□ -0.22
TRIM39-210ENST00000440271 BAK1Q16611 211 aa13.66□□□□□ -0.22
TRIM39-210ENST00000440271 Q6AWC8 147 aa13.66□□□□□ -0.22
TRIM39-210ENST00000440271 BOLA1Q9Y3E2 137 aa13.66□□□□□ -0.22
TRIM39-210ENST00000440271 IGHV3-16A0A0C4DH30 117 aa13.65□□□□□ -0.22
TRIM39-210ENST00000440271 FAM25EA8MYX2 175 aa13.65□□□□□ -0.22
TRIM39-210ENST00000440271 OR10J3Q5JRS4 329 aa13.65□□□□□ -0.22
TRIM39-210ENST00000440271 MIR17HGQ75NE6 70 aa13.65□□□□□ -0.22
TRIM39-210ENST00000440271 OR51M1Q9H341 326 aa13.65□□□□□ -0.22
TRIM39-210ENST00000440271 RBAKDNA6NC62 111 aa13.64□□□□□ -0.23
TRIM39-210ENST00000440271 M0R2P5 195 aa13.64□□□□□ -0.23
TRIM39-210ENST00000440271 PFN1P07737 140 aaKnown RBP13.64□□□□□ -0.23
TRIM39-210ENST00000440271 GATA1P15976 413 aaPredicted RBP13.64□□□□□ -0.23
TRIM39-210ENST00000440271 BTCP35070 178 aa13.64□□□□□ -0.23
TRIM39-210ENST00000440271 TRIQKQ629K1 86 aa13.64□□□□□ -0.23
TRIM39-210ENST00000440271 TMEM252Q8N6L7 170 aa13.64□□□□□ -0.23
TRIM39-210ENST00000440271 TM2D2Q9BX73 214 aa13.64□□□□□ -0.23
TRIM39-210ENST00000440271 IGSF23A1L1A6 192 aa13.63□□□□□ -0.23
TRIM39-210ENST00000440271 OR10J4P0C629 311 aa13.63□□□□□ -0.23
TRIM39-210ENST00000440271 PVALBP20472 110 aaPredicted RBP13.63□□□□□ -0.23
TRIM39-210ENST00000440271 CSN1S1P47710 185 aa13.63□□□□□ -0.23
TRIM39-210ENST00000440271 FXYD5Q96DB9 178 aa13.63□□□□□ -0.23
TRIM39-210ENST00000440271 LYRM2Q9NU23 88 aaPredicted RBP13.63□□□□□ -0.23
TRIM39-210ENST00000440271 PLA2G2DQ9UNK4 145 aa13.63□□□□□ -0.23
TRIM39-210ENST00000440271 GNRH2O43555 120 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 OXTP01178 125 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 HBG1P69891 147 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 HBG2P69892 147 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 ATP6V1FQ16864 119 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 TDRG1Q3Y452 100 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 SPANXN2Q5MJ10 180 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 PHYHIPLQ96FC7 376 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 NPCDR1Q9BY65 106 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 NAGKQ9UJ70 344 aa13.62□□□□□ -0.23
TRIM39-210ENST00000440271 C5orf51A6NDU8 294 aa13.61□□□□□ -0.23
TRIM39-210ENST00000440271 CENPXA8MT69 81 aa13.61□□□□□ -0.23
TRIM39-210ENST00000440271 KRTAP10-4P60372 401 aaPredicted RBP13.61□□□□□ -0.23
TRIM39-210ENST00000440271 LAGE3Q14657 143 aa13.61□□□□□ -0.23
TRIM39-210ENST00000440271 LELP1Q5T871 98 aa13.61□□□□□ -0.23
TRIM39-210ENST00000440271 SCXQ7RTU7 201 aa13.61□□□□□ -0.23
TRIM39-210ENST00000440271 STX12Q86Y82 276 aa13.61□□□□□ -0.23
TRIM39-210ENST00000440271 PAXXQ9BUH6 204 aa13.61□□□□□ -0.23
TRIM39-210ENST00000440271 LECT2O14960 151 aa13.6□□□□□ -0.23
TRIM39-210ENST00000440271 RANP62826 216 aaKnown RBP13.6□□□□□ -0.23
TRIM39-210ENST00000440271 SLC25A29Q8N8R3 303 aa13.6□□□□□ -0.23
TRIM39-210ENST00000440271 C2orf50Q96LR7 162 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms