RNA–Protein interactions for RNA: ENST00000440118.1

SHROOM1-204, Transcript of shroom family member 1, humanhuman

TSL 2

Gene SHROOM1, Length 1,080 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-204ENST00000440118 LINC00467Q9BRT7 94 aa13.88□□□□□ -0.19
SHROOM1-204ENST00000440118 HOXA5P20719 270 aa13.87□□□□□ -0.19
SHROOM1-204ENST00000440118 TCL1AP56279 114 aa13.87□□□□□ -0.19
SHROOM1-204ENST00000440118 RAB2AP61019 212 aa13.87□□□□□ -0.19
SHROOM1-204ENST00000440118 PQLC2Q6ZP29 291 aa13.87□□□□□ -0.19
SHROOM1-204ENST00000440118 SSX7Q7RTT5 188 aa13.87□□□□□ -0.19
SHROOM1-204ENST00000440118 HSD17B11Q8NBQ5 300 aa13.87□□□□□ -0.19
SHROOM1-204ENST00000440118 C11orf72Q8NBR9 251 aa13.87□□□□□ -0.19
SHROOM1-204ENST00000440118 OTORQ9NRC9 128 aa13.87□□□□□ -0.19
SHROOM1-204ENST00000440118 TRBV7-9A0A0J9YWB2 115 aa13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 DIRC3C9JPN6 131 aa13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 IFNA7P01567 189 aa13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 ZNF415Q09FC8 603 aa13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 IBA57Q5T440 356 aaKnown RBP13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 OR10G4Q8NGN3 311 aa13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 OR10G9Q8NGN4 311 aa13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 OR10G7Q8NGN6 311 aa13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 LINC00588Q9Y4M8 146 aa13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 KLF12Q9Y4X4 402 aa13.86□□□□□ -0.19
SHROOM1-204ENST00000440118 MUC4Q99102 2169 aa13.85□□□□□ -0.19
SHROOM1-204ENST00000440118 HMGB3O15347 200 aaKnown RBP13.85□□□□□ -0.19
SHROOM1-204ENST00000440118 MUC21Q5SSG8 566 aa13.85□□□□□ -0.19
SHROOM1-204ENST00000440118 C9orf62Q8N4C0 152 aa13.85□□□□□ -0.19
SHROOM1-204ENST00000440118 INO80EQ8NBZ0 244 aaPredicted RBP13.85□□□□□ -0.19
SHROOM1-204ENST00000440118 ZNRF2Q8NHG8 242 aa13.85□□□□□ -0.19
SHROOM1-204ENST00000440118 TP53TG3Q9ULZ0 132 aa13.85□□□□□ -0.19
SHROOM1-204ENST00000440118 NBDYA0A0U1RRE5 68 aa13.84□□□□□ -0.19
SHROOM1-204ENST00000440118 PGPA6NDG6 321 aa13.84□□□□□ -0.19
SHROOM1-204ENST00000440118 CDC34P49427 236 aaPredicted RBP13.84□□□□□ -0.19
SHROOM1-204ENST00000440118 MRPL16Q9NX20 251 aaKnown RBP13.84□□□□□ -0.19
SHROOM1-204ENST00000440118 NAGKQ9UJ70 344 aa13.84□□□□□ -0.19
SHROOM1-204ENST00000440118 HERC2O95714 4834 aa13.84□□□□□ -0.19
SHROOM1-204ENST00000440118 DNAH2Q9P225 4427 aa13.83□□□□□ -0.19
SHROOM1-204ENST00000440118 SPINK4O60575 86 aa13.83□□□□□ -0.2
SHROOM1-204ENST00000440118 GOLT1AQ6ZVE7 132 aa13.83□□□□□ -0.2
SHROOM1-204ENST00000440118 A0A1B0GVY2 172 aa13.82□□□□□ -0.2
SHROOM1-204ENST00000440118 H3BNG1 76 aa13.82□□□□□ -0.2
SHROOM1-204ENST00000440118 IGHV3-53P01767 116 aa13.82□□□□□ -0.2
SHROOM1-204ENST00000440118 ARL14EPLP0DKL9 152 aa13.82□□□□□ -0.2
SHROOM1-204ENST00000440118 RAB14P61106 215 aa13.82□□□□□ -0.2
SHROOM1-204ENST00000440118 FAM159AQ6UWV7 190 aa13.82□□□□□ -0.2
SHROOM1-204ENST00000440118 Q6ZQT7 251 aa13.82□□□□□ -0.2
SHROOM1-204ENST00000440118 AQP10Q96PS8 301 aa13.82□□□□□ -0.2
SHROOM1-204ENST00000440118 LENEPQ9Y5L5 61 aa13.82□□□□□ -0.2
SHROOM1-204ENST00000440118 TRGV11A0A075B6L2 103 aa13.81□□□□□ -0.2
SHROOM1-204ENST00000440118 FXYD6-FXYD2A0A087WZ82 144 aa13.81□□□□□ -0.2
SHROOM1-204ENST00000440118 SMLR1H3BR10 107 aa13.81□□□□□ -0.2
SHROOM1-204ENST00000440118 EIF5AP63241 154 aaKnown RBP13.81□□□□□ -0.2
SHROOM1-204ENST00000440118 ZNF345Q14585 488 aa13.81□□□□□ -0.2
SHROOM1-204ENST00000440118 C18orf15Q96N68 181 aa13.81□□□□□ -0.2
SHROOM1-204ENST00000440118 PSMG3Q9BT73 122 aaPredicted RBP13.81□□□□□ -0.2
SHROOM1-204ENST00000440118 FAT2Q9NYQ8 4349 aa13.8□□□□□ -0.2
SHROOM1-204ENST00000440118 MBP02144 154 aa13.8□□□□□ -0.2
SHROOM1-204ENST00000440118 TMEM183BQ1AE95 376 aa13.8□□□□□ -0.2
SHROOM1-204ENST00000440118 LGALSLQ3ZCW2 172 aaPredicted RBP13.8□□□□□ -0.2
SHROOM1-204ENST00000440118 TTC32Q5I0X7 151 aa13.8□□□□□ -0.2
SHROOM1-204ENST00000440118 TMEM183AQ8IXX5 376 aa13.8□□□□□ -0.2
SHROOM1-204ENST00000440118 C6orf223Q8N319 242 aa13.8□□□□□ -0.2
SHROOM1-204ENST00000440118 OR2G3Q8NGZ4 309 aa13.8□□□□□ -0.2
SHROOM1-204ENST00000440118 TMED6Q8WW62 240 aa13.8□□□□□ -0.2
SHROOM1-204ENST00000440118 KANTRA0A1W2PQU2 76 aa13.79□□□□□ -0.2
SHROOM1-204ENST00000440118 ATP6V0CP27449 155 aa13.79□□□□□ -0.2
SHROOM1-204ENST00000440118 GNG5P63218 68 aa13.79□□□□□ -0.2
SHROOM1-204ENST00000440118 Q6AWC8 147 aa13.79□□□□□ -0.2
SHROOM1-204ENST00000440118 IQCF2Q8IXL9 164 aa13.79□□□□□ -0.2
SHROOM1-204ENST00000440118 NDFIP1Q9BT67 221 aa13.79□□□□□ -0.2
SHROOM1-204ENST00000440118 Q9H8V8 135 aa13.79□□□□□ -0.2
SHROOM1-204ENST00000440118 DNAH17Q9UFH2 4485 aa13.79□□□□□ -0.2
SHROOM1-204ENST00000440118 BORCS7-ASMTA0A0B4J1R7 106 aa13.78□□□□□ -0.2
SHROOM1-204ENST00000440118 K7EQM0 130 aa13.78□□□□□ -0.2
SHROOM1-204ENST00000440118 PAX4O43316 350 aa13.78□□□□□ -0.2
SHROOM1-204ENST00000440118 SLC51BQ86UW2 128 aa13.78□□□□□ -0.2
SHROOM1-204ENST00000440118 OR11H4Q8NGC9 324 aa13.78□□□□□ -0.2
SHROOM1-204ENST00000440118 TREM1Q9NP99 234 aa13.78□□□□□ -0.2
SHROOM1-204ENST00000440118 ICOSQ9Y6W8 199 aa13.78□□□□□ -0.2
SHROOM1-204ENST00000440118 TRAV8-1A0A0A6YYK1 113 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 F6UZH7 168 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 ARPC5O15511 151 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 S100A1P23297 94 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 SERF2P84101 59 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 IFITM2Q01629 132 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 ESRGQ1W209 222 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 TEX261Q6UWH6 196 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 TMUB2Q71RG4 321 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 RAB24Q969Q5 203 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 VSIG2Q96IQ7 327 aa13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 ACTR3CQ9C0K3 210 aaPredicted RBP13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 MRPS16Q9Y3D3 137 aaKnown RBP13.77□□□□□ -0.21
SHROOM1-204ENST00000440118 A0A096LPF7 62 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 TRAV21A0A0B4J279 112 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 TRGV4A0A0C4DH28 118 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 TAAR5O14804 337 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 STAG3L2P0CL84 134 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 STAG3L3P0CL85 134 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 GCHFRP30047 84 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 SLAQ13239 276 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 KRTAP17-1Q9BYP8 105 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 SH3BGRL3Q9H299 93 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 MDFICQ9P1T7 246 aa13.76□□□□□ -0.21
SHROOM1-204ENST00000440118 PRO0255Q9UI72 69 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms