RNA–Protein interactions for RNA: ENST00000439955.1

AC009404.1-202, humanhuman

TSL 3 BASIC

Gene AC009404.1, Length 968 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC009404.1-202ENST00000439955 ODF3Q96PU9 254 aa8.72□□□□□ -1.01
AC009404.1-202ENST00000439955 AGPAT4-IT1Q9H0P7 198 aa8.72□□□□□ -1.01
AC009404.1-202ENST00000439955 SELENOKQ9Y6D0 94 aa8.72□□□□□ -1.01
AC009404.1-202ENST00000439955 DNAH1Q9P2D7 4330 aa8.72□□□□□ -1.01
AC009404.1-202ENST00000439955 MGST1P10620 155 aaKnown RBP8.71□□□□□ -1.02
AC009404.1-202ENST00000439955 RNF212Q495C1 297 aa8.71□□□□□ -1.02
AC009404.1-202ENST00000439955 C15orf54Q8N8G6 183 aa8.71□□□□□ -1.02
AC009404.1-202ENST00000439955 SAV1Q9H4B6 383 aaPredicted RBP8.71□□□□□ -1.02
AC009404.1-202ENST00000439955 RPS10P5Q9NQ39 176 aa8.71□□□□□ -1.02
AC009404.1-202ENST00000439955 OSTCQ9NRP0 149 aa8.71□□□□□ -1.02
AC009404.1-202ENST00000439955 A0A0J9YX75 114 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 IZUMO1RA6ND01 250 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 A8MTW9 85 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 CT45A10P0DMU9 189 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 HIST1H1AQ02539 215 aaPredicted RBP8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 ERCC8Q13216 396 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 SMUG1Q53HV7 270 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 EBLN2Q6P2I7 272 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 Q8TAT8 98 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 GPR61Q9BZJ8 451 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 TUBA4BQ9H853 241 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 MAP6D1Q9H9H5 199 aa8.7□□□□□ -1.02
AC009404.1-202ENST00000439955 CXorf65A6NEN9 183 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 H7BYZ3 331 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 CRISP2P16562 243 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 DEFB131AP59861 70 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 ERVFC1-1P60608 527 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 OR5I1Q13606 314 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 IBA57Q5T440 356 aaKnown RBP8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 ZFAND6Q6FIF0 208 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 NHLRC2Q8NBF2 726 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 OR10G8Q8NGN5 311 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 ZC2HC1AQ96GY0 325 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 FAM19A4Q96LR4 140 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 CLUHP3Q96NS8 147 aa8.69□□□□□ -1.02
AC009404.1-202ENST00000439955 STAB2Q8WWQ8 2551 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 C19orf71A6NCJ1 209 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 F6UB75 175 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 HLA-DRB4P13762 266 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 SMCPP49901 116 aaPredicted RBP8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 ODF3L2Q3SX64 289 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 CT83Q5H943 113 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 FAM162BQ5T6X4 162 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 APRG1Q8IVJ8 170 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 OR4B1Q8NGF8 309 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 IMMP2LQ96T52 175 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 SMCO4Q9NRQ5 59 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 HLA-DRB4X5D2U9 266 aa8.68□□□□□ -1.02
AC009404.1-202ENST00000439955 OR11H12B2RN74 326 aa8.67□□□□□ -1.02
AC009404.1-202ENST00000439955 ZNF705DP0CH99 300 aaPredicted RBP8.67□□□□□ -1.02
AC009404.1-202ENST00000439955 ZNF705BP0CI00 300 aaPredicted RBP8.67□□□□□ -1.02
AC009404.1-202ENST00000439955 LEPP41159 167 aa8.67□□□□□ -1.02
AC009404.1-202ENST00000439955 PRR27Q6MZM9 219 aa8.67□□□□□ -1.02
AC009404.1-202ENST00000439955 DAZAP1Q96EP5 407 aaKnown RBP8.67□□□□□ -1.02
AC009404.1-202ENST00000439955 C8orf49Q96NF6 230 aa8.67□□□□□ -1.02
AC009404.1-202ENST00000439955 V9GYV3 84 aa8.67□□□□□ -1.02
AC009404.1-202ENST00000439955 KLLNB2CW77 178 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 H3BMM0 161 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 GATCO43716 136 aaKnown RBP8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 SCO1O75880 301 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 P01737 135 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 PRB4P10163 310 aaPredicted RBP8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 TSPOP30536 169 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 DEFB1P60022 68 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 GDF5OSQ5U4N7 250 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 LINC00322Q6ZN03 302 aaPredicted RBP8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 ZFAND2AQ8N6M9 145 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 NUDT10Q8NFP7 164 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 NUDT11Q96G61 164 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 RNASE7Q9H1E1 156 aaKnown RBP8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 RPP21Q9H633 154 aaKnown RBP8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 LYSTQ99698 3801 aa8.66□□□□□ -1.02
AC009404.1-202ENST00000439955 TRAV9-1A0A075B6T8 112 aa8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 FABP5P3A8MUU1 101 aa8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 ZNF705GA8MUZ8 300 aaPredicted RBP8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 SH2D1AO60880 128 aa8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 PFN1P07737 140 aaKnown RBP8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 CRIP1P50238 77 aa8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 KCNIP4Q6PIL6 250 aa8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 AMTNQ6UX39 209 aa8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 CBLN2Q8IUK8 224 aa8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 C19orf73Q9NVV2 129 aa8.65□□□□□ -1.02
AC009404.1-202ENST00000439955 PCLOQ9Y6V0 5065 aa8.65□□□□□ -1.03
AC009404.1-202ENST00000439955 DNAH7Q8WXX0 4024 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 FAM231BA6NCW3 169 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 KNCNA6PVL3 124 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 S100PP25815 95 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 ZNF80P51504 273 aaPredicted RBP8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 BTN1A1Q13410 526 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 ACTL10Q5JWF8 245 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 Q6AWC8 147 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 TMEM88Q6PEY1 159 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 BTF3L4Q96K17 158 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 RCHY1Q96PM5 261 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 IL36BQ9NZH7 164 aa8.64□□□□□ -1.03
AC009404.1-202ENST00000439955 TRAV21A0A0B4J279 112 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 XKRY2A2RUG3 117 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 A8MWL6 223 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 AMBPP02760 352 aa8.63□□□□□ -1.03
AC009404.1-202ENST00000439955 GPX1P07203 203 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms