RNA–Protein interactions for RNA: ENST00000439619.6

CCDC78-204, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,064 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-204ENST00000439619 OTORQ9NRC9 128 aa13.06□□□□□ -0.32
CCDC78-204ENST00000439619 MRPS16Q9Y3D3 137 aaKnown RBP13.06□□□□□ -0.32
CCDC78-204ENST00000439619 DIRC3C9JPN6 131 aa13.05□□□□□ -0.32
CCDC78-204ENST00000439619 ESRGQ1W209 222 aa13.05□□□□□ -0.32
CCDC78-204ENST00000439619 PRR9Q5T870 116 aa13.05□□□□□ -0.32
CCDC78-204ENST00000439619 FAM159AQ6UWV7 190 aa13.05□□□□□ -0.32
CCDC78-204ENST00000439619 DNAH2Q9P225 4427 aa13.04□□□□□ -0.32
CCDC78-204ENST00000439619 A0A1W2PPQ1 181 aa13.04□□□□□ -0.32
CCDC78-204ENST00000439619 PAX4O43316 350 aa13.04□□□□□ -0.32
CCDC78-204ENST00000439619 TMED6Q8WW62 240 aa13.04□□□□□ -0.32
CCDC78-204ENST00000439619 PRO0255Q9UI72 69 aa13.04□□□□□ -0.32
CCDC78-204ENST00000439619 TP53TG3Q9ULZ0 132 aa13.04□□□□□ -0.32
CCDC78-204ENST00000439619 ICOSQ9Y6W8 199 aa13.04□□□□□ -0.32
CCDC78-204ENST00000439619 TRGV11A0A075B6L2 103 aa13.03□□□□□ -0.32
CCDC78-204ENST00000439619 PGPA6NDG6 321 aa13.03□□□□□ -0.32
CCDC78-204ENST00000439619 BTF3P20290 206 aaKnown RBP13.03□□□□□ -0.32
CCDC78-204ENST00000439619 MUC21Q5SSG8 566 aa13.03□□□□□ -0.32
CCDC78-204ENST00000439619 ARL6IP6Q8N6S5 226 aa13.03□□□□□ -0.32
CCDC78-204ENST00000439619 VSIG2Q96IQ7 327 aa13.03□□□□□ -0.32
CCDC78-204ENST00000439619 MRPL16Q9NX20 251 aaKnown RBP13.03□□□□□ -0.32
CCDC78-204ENST00000439619 RPH3ALQ9UNE2 315 aa13.03□□□□□ -0.32
CCDC78-204ENST00000439619 NACAE9PAV3 2078 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 A0A096LPF7 62 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 TNP2Q05952 138 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 Q6AWC8 147 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 OR10G4Q8NGN3 311 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 OR10G9Q8NGN4 311 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 OR10G7Q8NGN6 311 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 SPXQ9BT56 116 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 ALG5Q9Y673 324 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 FAT2Q9NYQ8 4349 aa13.02□□□□□ -0.33
CCDC78-204ENST00000439619 PTTG1O95997 202 aa13.01□□□□□ -0.33
CCDC78-204ENST00000439619 IGHV3-53P01767 116 aa13.01□□□□□ -0.33
CCDC78-204ENST00000439619 MED28Q9H204 178 aa13.01□□□□□ -0.33
CCDC78-204ENST00000439619 WFDC1Q9HC57 220 aa13.01□□□□□ -0.33
CCDC78-204ENST00000439619 HHLA3Q9XRX5 114 aa13.01□□□□□ -0.33
CCDC78-204ENST00000439619 TRGV4A0A0C4DH28 118 aa13□□□□□ -0.33
CCDC78-204ENST00000439619 C16orf90A8MZG2 172 aa13□□□□□ -0.33
CCDC78-204ENST00000439619 RAB2AP61019 212 aa13□□□□□ -0.33
CCDC78-204ENST00000439619 NAGKQ9UJ70 344 aa13□□□□□ -0.33
CCDC78-204ENST00000439619 MBP02144 154 aa12.99□□□□□ -0.33
CCDC78-204ENST00000439619 MRPL23Q16540 153 aaKnown RBP12.99□□□□□ -0.33
CCDC78-204ENST00000439619 TMEM183BQ1AE95 376 aa12.99□□□□□ -0.33
CCDC78-204ENST00000439619 Q6ZQT7 251 aa12.99□□□□□ -0.33
CCDC78-204ENST00000439619 GOLT1AQ6ZVE7 132 aa12.99□□□□□ -0.33
CCDC78-204ENST00000439619 ZNF575Q86XF7 245 aa12.99□□□□□ -0.33
CCDC78-204ENST00000439619 TMEM183AQ8IXX5 376 aa12.99□□□□□ -0.33
CCDC78-204ENST00000439619 PCNPQ8WW12 178 aaKnown RBP12.99□□□□□ -0.33
CCDC78-204ENST00000439619 NDFIP1Q9BT67 221 aa12.99□□□□□ -0.33
CCDC78-204ENST00000439619 TRAV21A0A0B4J279 112 aa12.98□□□□□ -0.33
CCDC78-204ENST00000439619 SERTM2A0A1B0GWG4 89 aa12.98□□□□□ -0.33
CCDC78-204ENST00000439619 K7EQM0 130 aa12.98□□□□□ -0.33
CCDC78-204ENST00000439619 SIVA1O15304 175 aa12.98□□□□□ -0.33
CCDC78-204ENST00000439619 CDC34P49427 236 aaPredicted RBP12.98□□□□□ -0.33
CCDC78-204ENST00000439619 ASB13Q8WXK3 278 aa12.98□□□□□ -0.33
CCDC78-204ENST00000439619 C8orf49Q96NF6 230 aa12.98□□□□□ -0.33
CCDC78-204ENST00000439619 MDFICQ9P1T7 246 aa12.98□□□□□ -0.33
CCDC78-204ENST00000439619 DNAH17Q9UFH2 4485 aa12.98□□□□□ -0.33
CCDC78-204ENST00000439619 HERC2O95714 4834 aa12.97□□□□□ -0.33
CCDC78-204ENST00000439619 EIF3GO75821 320 aaKnown RBP eCLIP12.97□□□□□ -0.33
CCDC78-204ENST00000439619 CRYBA4P53673 196 aa12.97□□□□□ -0.33
CCDC78-204ENST00000439619 TDRG1Q3Y452 100 aa12.97□□□□□ -0.33
CCDC78-204ENST00000439619 HSD17B11Q8NBQ5 300 aa12.97□□□□□ -0.33
CCDC78-204ENST00000439619 OR2G3Q8NGZ4 309 aa12.97□□□□□ -0.33
CCDC78-204ENST00000439619 KCNS1Q96KK3 526 aa12.97□□□□□ -0.33
CCDC78-204ENST00000439619 AQP10Q96PS8 301 aa12.97□□□□□ -0.33
CCDC78-204ENST00000439619 PSMG3Q9BT73 122 aaPredicted RBP12.97□□□□□ -0.33
CCDC78-204ENST00000439619 TREM1Q9NP99 234 aa12.97□□□□□ -0.33
CCDC78-204ENST00000439619 HMGB3O15347 200 aaKnown RBP12.96□□□□□ -0.33
CCDC78-204ENST00000439619 ARL14EPLP0DKL9 152 aa12.96□□□□□ -0.33
CCDC78-204ENST00000439619 SERF2P84101 59 aa12.96□□□□□ -0.33
CCDC78-204ENST00000439619 FHL2Q14192 279 aa12.96□□□□□ -0.33
CCDC78-204ENST00000439619 NEGR1Q7Z3B1 354 aa12.96□□□□□ -0.33
CCDC78-204ENST00000439619 INO80EQ8NBZ0 244 aaPredicted RBP12.96□□□□□ -0.33
CCDC78-204ENST00000439619 RASL10AQ92737 203 aa12.96□□□□□ -0.33
CCDC78-204ENST00000439619 ORM1P02763 201 aa12.95□□□□□ -0.34
CCDC78-204ENST00000439619 SRIP30626 198 aa12.95□□□□□ -0.34
CCDC78-204ENST00000439619 IQCF2Q8IXL9 164 aa12.95□□□□□ -0.34
CCDC78-204ENST00000439619 SDF2L1Q9HCN8 221 aa12.95□□□□□ -0.34
CCDC78-204ENST00000439619 TRAV9-2A0A087WT02 112 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 M0R2P5 195 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 NXPH4O95158 308 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 STAG3L2P0CL84 134 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 STAG3L3P0CL85 134 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 C5orf17Q8NAS9 161 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 RAB24Q969Q5 203 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 KRTAP17-1Q9BYP8 105 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 KRTAP1-5Q9BYS1 174 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 TMEM167BQ9NRX6 74 aa12.94□□□□□ -0.34
CCDC78-204ENST00000439619 KIAA1109Q2LD37 5005 aa12.93□□□□□ -0.34
CCDC78-204ENST00000439619 C9JCJ5 164 aa12.93□□□□□ -0.34
CCDC78-204ENST00000439619 F6UZH7 168 aa12.93□□□□□ -0.34
CCDC78-204ENST00000439619 GIPP09681 153 aaPredicted RBP12.93□□□□□ -0.34
CCDC78-204ENST00000439619 ATP6V0CP27449 155 aa12.93□□□□□ -0.34
CCDC78-204ENST00000439619 ZFP69Q49AA0 526 aa12.93□□□□□ -0.34
CCDC78-204ENST00000439619 OR4C5Q8NGB2 326 aa12.93□□□□□ -0.34
CCDC78-204ENST00000439619 ACTR3CQ9C0K3 210 aaPredicted RBP12.93□□□□□ -0.34
CCDC78-204ENST00000439619 PKD1P98161 4303 aa12.93□□□□□ -0.34
CCDC78-204ENST00000439619 TRAV8-1A0A0A6YYK1 113 aa12.92□□□□□ -0.34
CCDC78-204ENST00000439619 BORCS7-ASMTA0A0B4J1R7 106 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms