RNA–Protein interactions for RNA: ENST00000438681.6

PAX6-211, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,395 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-211ENST00000438681 NUP35Q8NFH5 326 aa9.66□□□□□ -0.86
PAX6-211ENST00000438681 OR2D3Q8NGH3 330 aa9.66□□□□□ -0.86
PAX6-211ENST00000438681 DLX4Q92988 240 aaPredicted RBP9.66□□□□□ -0.86
PAX6-211ENST00000438681 BORCS7Q96B45 105 aa9.66□□□□□ -0.86
PAX6-211ENST00000438681 NEU1Q99519 415 aa9.66□□□□□ -0.86
PAX6-211ENST00000438681 RHPN1-AS1Q9BWJ2 59 aa9.66□□□□□ -0.86
PAX6-211ENST00000438681 IGHV3OR16-13A0A075B7E8 117 aa9.65□□□□□ -0.86
PAX6-211ENST00000438681 IGKV2-40A0A087WW87 121 aaPredicted RBP9.65□□□□□ -0.86
PAX6-211ENST00000438681 IGHV3-49A0A0A0MS15 119 aa9.65□□□□□ -0.86
PAX6-211ENST00000438681 IGHV3-74A0A0B4J1X5 117 aa9.65□□□□□ -0.86
PAX6-211ENST00000438681 LINC01619G3V211 115 aa9.65□□□□□ -0.86
PAX6-211ENST00000438681 IGKV2D-40P01614 121 aaPredicted RBP9.65□□□□□ -0.86
PAX6-211ENST00000438681 PRB2P02812 416 aaPredicted RBP9.65□□□□□ -0.86
PAX6-211ENST00000438681 FOXA3P55318 350 aaPredicted RBP9.65□□□□□ -0.86
PAX6-211ENST00000438681 RAB4BP61018 213 aa9.65□□□□□ -0.86
PAX6-211ENST00000438681 SAMD5Q5TGI4 173 aa9.65□□□□□ -0.86
PAX6-211ENST00000438681 C9orf47Q6ZRZ4 202 aa9.65□□□□□ -0.86
PAX6-211ENST00000438681 ASCL2Q99929 193 aa9.65□□□□□ -0.86
PAX6-211ENST00000438681 TRAV8-2A0A0B4J237 113 aa9.64□□□□□ -0.87
PAX6-211ENST00000438681 CBLN1P23435 193 aa9.64□□□□□ -0.87
PAX6-211ENST00000438681 HOXD3P31249 432 aaPredicted RBP9.64□□□□□ -0.87
PAX6-211ENST00000438681 HBBP68871 147 aa9.64□□□□□ -0.87
PAX6-211ENST00000438681 TMEM136Q6ZRR5 245 aa9.64□□□□□ -0.87
PAX6-211ENST00000438681 LINC00477Q96M19 166 aa9.64□□□□□ -0.87
PAX6-211ENST00000438681 TRBV7-9A0A0J9YWB2 115 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 TMEM189A5PLL7 270 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 FABP5P3A8MUU1 101 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 CA1P00915 261 aaPredicted RBP9.63□□□□□ -0.87
PAX6-211ENST00000438681 ZNF138P52744 262 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 RPL11P62913 178 aaKnown RBP9.63□□□□□ -0.87
PAX6-211ENST00000438681 RIGQ13278 110 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 TM4SF20Q53R12 229 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 MRPL54Q6P161 138 aaKnown RBP9.63□□□□□ -0.87
PAX6-211ENST00000438681 LINC00322Q6ZN03 302 aaPredicted RBP9.63□□□□□ -0.87
PAX6-211ENST00000438681 ZNF738Q8NE65 137 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 OR10J6PQ8NGY7 276 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 ZNF705FA8MVS1 300 aaPredicted RBP9.63□□□□□ -0.87
PAX6-211ENST00000438681 APCSP02743 223 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 SMIM6P0DI80 62 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 CRISP2P16562 243 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 HIST1H1AQ02539 215 aaPredicted RBP9.63□□□□□ -0.87
PAX6-211ENST00000438681 BEAN1Q3B7T3 259 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 TCF24Q7RTU0 167 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 RNF182Q8N6D2 247 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 C8orf49Q96NF6 230 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 VGLL1Q99990 258 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 PEMTQ9UBM1 199 aa9.63□□□□□ -0.87
PAX6-211ENST00000438681 FBN3Q75N90 2809 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 A0A1B0GXF2 115 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 SOCS3O14543 225 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 SPINK4O60575 86 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 SH2D1AO60880 128 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 HLA-DMBP28068 263 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 KRTAP10-11P60412 298 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 DEFA6Q01524 100 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 OR10J3Q5JRS4 329 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 IGFL4Q6B9Z1 124 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 HIST3H2BBQ8N257 126 aa9.62□□□□□ -0.87
PAX6-211ENST00000438681 NBEAL1Q6ZS30 2694 aa9.61□□□□□ -0.87
PAX6-211ENST00000438681 A0A1B0GUT8 65 aa9.61□□□□□ -0.87
PAX6-211ENST00000438681 SYNJ2BPP57105 145 aa9.61□□□□□ -0.87
PAX6-211ENST00000438681 PAFAH1B2P68402 229 aa9.61□□□□□ -0.87
PAX6-211ENST00000438681 Q0VG73 95 aa9.61□□□□□ -0.87
PAX6-211ENST00000438681 LINC00518Q8N0U6 118 aa9.61□□□□□ -0.87
PAX6-211ENST00000438681 PGLYRP4Q96LB8 373 aa9.61□□□□□ -0.87
PAX6-211ENST00000438681 AGPAT4-IT1Q9H0P7 198 aa9.61□□□□□ -0.87
PAX6-211ENST00000438681 MGAM2Q2M2H8 2515 aa9.6□□□□□ -0.87
PAX6-211ENST00000438681 TMEM213A2RRL7 107 aa9.6□□□□□ -0.87
PAX6-211ENST00000438681 EDN2P20800 178 aa9.6□□□□□ -0.87
PAX6-211ENST00000438681 CRIP1P50238 77 aa9.6□□□□□ -0.87
PAX6-211ENST00000438681 SNRPD3P62318 126 aaKnown RBP9.6□□□□□ -0.87
PAX6-211ENST00000438681 KLF5Q13887 457 aaPredicted RBP9.6□□□□□ -0.87
PAX6-211ENST00000438681 GTSF1Q8WW33 167 aa9.6□□□□□ -0.87
PAX6-211ENST00000438681 TMEM18Q96B42 140 aa9.6□□□□□ -0.87
PAX6-211ENST00000438681 SELENOKQ9Y6D0 94 aa9.6□□□□□ -0.87
PAX6-211ENST00000438681 PRAC2D3DTV9 90 aa9.59□□□□□ -0.87
PAX6-211ENST00000438681 ERCC8Q13216 396 aa9.59□□□□□ -0.87
PAX6-211ENST00000438681 LINC01559Q495D7 138 aa9.59□□□□□ -0.87
PAX6-211ENST00000438681 Q8TAT8 98 aa9.59□□□□□ -0.87
PAX6-211ENST00000438681 TRAV2A0A0B4J234 112 aa9.58□□□□□ -0.88
PAX6-211ENST00000438681 F2Z2F3 143 aa9.58□□□□□ -0.88
PAX6-211ENST00000438681 CAMPP49913 170 aa9.58□□□□□ -0.88
PAX6-211ENST00000438681 KPRPQ5T749 579 aaPredicted RBP9.58□□□□□ -0.88
PAX6-211ENST00000438681 BAGE3Q86Y29 109 aa9.58□□□□□ -0.88
PAX6-211ENST00000438681 GATD1Q8NB37 220 aa9.58□□□□□ -0.88
PAX6-211ENST00000438681 MCRIP2Q9BUT9 160 aaKnown RBP9.58□□□□□ -0.88
PAX6-211ENST00000438681 GPR61Q9BZJ8 451 aa9.58□□□□□ -0.88
PAX6-211ENST00000438681 C2orf70A6NJV1 201 aa9.57□□□□□ -0.88
PAX6-211ENST00000438681 SAP30O75446 220 aa9.57□□□□□ -0.88
PAX6-211ENST00000438681 ORM1P02763 201 aa9.57□□□□□ -0.88
PAX6-211ENST00000438681 ESDP10768 282 aa9.57□□□□□ -0.88
PAX6-211ENST00000438681 C9orf66Q5T8R8 295 aa9.57□□□□□ -0.88
PAX6-211ENST00000438681 DMRTA1Q5VZB9 504 aa9.57□□□□□ -0.88
PAX6-211ENST00000438681 OR8A1Q8NGG7 326 aa9.57□□□□□ -0.88
PAX6-211ENST00000438681 C20orf173Q96LM9 149 aa9.57□□□□□ -0.88
PAX6-211ENST00000438681 FABP4P15090 132 aa9.56□□□□□ -0.88
PAX6-211ENST00000438681 DNLZQ5SXM8 178 aa9.56□□□□□ -0.88
PAX6-211ENST00000438681 ADAMTSL5Q6ZMM2 481 aa9.56□□□□□ -0.88
PAX6-211ENST00000438681 FER1L6-AS1Q8NA97 138 aa9.56□□□□□ -0.88
PAX6-211ENST00000438681 DCANP1Q8TF63 244 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms