RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 FAM223AQ8IWN6 122 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 OR11H6Q8NGC7 330 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 WFDC12Q8WWY7 111 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 BPESC1Q9GZL8 116 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 VCYO14598 125 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 CDKN1BP46527 198 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 PCP2Q8IVA1 136 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 DYNAPQ8N1N2 210 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 C1orf159Q96HA4 380 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 USMG5Q96IX5 58 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 SPOCK3Q9BQ16 436 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 HTTP42858 3142 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 IGLV11-55A0A075B6I3 123 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 A0A1W2PPM0 123 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 H3BUX3 64 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 C2orf66Q6UXQ4 117 aa5.25□□□□□ -1.57
CSDE1-205ENST00000438362 IGHV3OR16-12A0A075B7B8 117 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 TRAV26-2A0A0B4J265 109 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 TRBV6-1A0A0K0K1D8 114 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 TAX1BP3O14907 124 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 DUSP14O95147 198 aaKnown RBP5.24□□□□□ -1.57
CSDE1-205ENST00000438362 RHPN1-AS1Q9BWJ2 59 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 GTSF1LQ9H1H1 148 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 MUC6Q6W4X9 2439 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 SNCGO76070 127 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 ZNF688P0C7X2 276 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 DEFB104AQ8WTQ1 72 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 IGFBPL1Q8WX77 278 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 SMIM2Q9BVW6 85 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 AGPAT4-IT1Q9H0P7 198 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 PGPEP1Q9NXJ5 209 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 TRAV2A0A0B4J234 112 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 A8MWV9 139 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 F8VRH5 84 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 FCN3O75636 299 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 LINC00310P59036 64 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 C1orf122Q6ZSJ8 110 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 C22orf34Q6ZV56 151 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 NPBQ8NG41 125 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 DLX4Q92988 240 aaPredicted RBP5.24□□□□□ -1.57
CSDE1-205ENST00000438362 DUX3Q96PT4 197 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 RNF114Q9Y508 228 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 PIEZO2Q9H5I5 2752 aa5.24□□□□□ -1.57
CSDE1-205ENST00000438362 TRAV12-3A0A0B4J271 114 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 C19orf54Q5BKX5 351 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 MSRB1Q9NZV6 116 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 TANC2Q9HCD6 1990 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 WI2-2373I1.2A0A1W2PRP0 233 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 CTSGP08311 255 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 TTC32Q5I0X7 151 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 MEIG1Q5JSS6 88 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 PRO3102Q9H379 93 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 PTPRQQ9UMZ3 2332 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 ACACBO00763 2458 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 CHD7Q9P2D1 2997 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 GATA1P15976 413 aaPredicted RBP5.23□□□□□ -1.57
CSDE1-205ENST00000438362 EMP1P54849 157 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 LY6DQ14210 128 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 COPS9Q8WXC6 57 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 TLN1Q9Y490 2541 aaKnown RBP5.23□□□□□ -1.57
CSDE1-205ENST00000438362 TRGV11A0A075B6L2 103 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 PSMB11A5LHX3 300 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 OVOL3O00110 214 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 GRNP28799 593 aaKnown RBP5.23□□□□□ -1.57
CSDE1-205ENST00000438362 SPATA12Q7Z6I5 190 aa5.23□□□□□ -1.57
CSDE1-205ENST00000438362 DAZ1Q9NQZ3 744 aaKnown RBP5.23□□□□□ -1.57
CSDE1-205ENST00000438362 IGHV3-64A0A075B6Q5 118 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 A0A087WWL8 130 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 IGHV7-81A0A0B4J1V7 117 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 TRAV8-2A0A0B4J237 113 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 RBAKDNA6NC62 111 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 CD28P10747 220 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 MYCNOSP40205 109 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 TAL2Q16559 108 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 ETDBQ3ZM63 59 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 CEND1Q8N111 149 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 CFHR4Q92496 578 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 ERG28Q9UKR5 140 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 MYMXA0A1B0GTQ4 84 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 K7ERJ3 54 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 HLA-DRB4P13762 266 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 ZNF876PQ49A33 203 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 HLA-DRB4X5D2U9 266 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 A0A087WX48 190 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 TMEM262E9PQX1 116 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 UBE2L6O14933 153 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 SLC25A16P16260 332 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 ANXA2RQ3ZCQ2 193 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 RUSC1-AS1Q66K80 236 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 BOD1L2Q8IYS8 172 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 TP53TG1Q9Y2A0 90 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 FAM208BQ5VWN6 2430 aa5.22□□□□□ -1.57
CSDE1-205ENST00000438362 TRBV25-1A0A075B6N4 114 aa5.21□□□□□ -1.57
CSDE1-205ENST00000438362 TMEM238C9JI98 176 aa5.21□□□□□ -1.57
CSDE1-205ENST00000438362 NDUFS8O00217 210 aa5.21□□□□□ -1.57
CSDE1-205ENST00000438362 COX6B1P14854 86 aa5.21□□□□□ -1.57
CSDE1-205ENST00000438362 ZNF493Q6ZR52 646 aa5.21□□□□□ -1.57
CSDE1-205ENST00000438362 LCNL1Q6ZST4 164 aa5.21□□□□□ -1.57
CSDE1-205ENST00000438362 PLEKHB2Q96CS7 222 aa5.21□□□□□ -1.57
CSDE1-205ENST00000438362 LINC01587Q99440 93 aa5.21□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms