RNA–Protein interactions for RNA: ENST00000435145.6

HLA-DQB2-231, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

BASIC

Gene HLA-DQB2, Length 2,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-231ENST00000435145 TNFRSF6BO95407 300 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 CACNG7P62955 275 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 UBE2V1Q13404 147 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 NXT2Q9NPJ8 142 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 LENEPQ9Y5L5 61 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 ASH1LQ9NR48 2969 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 TAX1BP3O14907 124 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 TRGV3P03979 118 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 PPIFP30405 207 aaKnown RBP12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 FXYD7P58549 80 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 C9orf139Q6ZV77 190 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 C10orf105Q8TEF2 133 aa12.28□□□□□ -0.44
HLA-DQB2-231ENST00000435145 TRAV40A0A0B4J280 105 aa12.27□□□□□ -0.44
HLA-DQB2-231ENST00000435145 SNAI2O43623 268 aa12.27□□□□□ -0.44
HLA-DQB2-231ENST00000435145 ARL3P36405 182 aa12.27□□□□□ -0.44
HLA-DQB2-231ENST00000435145 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.44
HLA-DQB2-231ENST00000435145 IGLV2-18A0A075B6J9 118 aa12.27□□□□□ -0.45
HLA-DQB2-231ENST00000435145 PRSS47A8MTI9 375 aa12.27□□□□□ -0.45
HLA-DQB2-231ENST00000435145 H3BUA1 57 aa12.27□□□□□ -0.45
HLA-DQB2-231ENST00000435145 FCER1GP30273 86 aa12.27□□□□□ -0.45
HLA-DQB2-231ENST00000435145 FOXE3Q13461 319 aa12.27□□□□□ -0.45
HLA-DQB2-231ENST00000435145 BRD3OSQ6XYD6 125 aa12.27□□□□□ -0.45
HLA-DQB2-231ENST00000435145 GPHB5Q86YW7 130 aa12.27□□□□□ -0.45
HLA-DQB2-231ENST00000435145 C20orf173Q96LM9 149 aa12.27□□□□□ -0.45
HLA-DQB2-231ENST00000435145 LINC00527Q9UJ94 153 aa12.27□□□□□ -0.45
HLA-DQB2-231ENST00000435145 CACNA1BQ00975 2339 aa12.26□□□□□ -0.45
HLA-DQB2-231ENST00000435145 ITPR1Q14643 2758 aa12.26□□□□□ -0.45
HLA-DQB2-231ENST00000435145 NDUFA4O00483 81 aa12.26□□□□□ -0.45
HLA-DQB2-231ENST00000435145 PTTG1IPP53801 180 aa12.26□□□□□ -0.45
HLA-DQB2-231ENST00000435145 SOCS3O14543 225 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 IGHG2P01859 326 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 UNQ9165/PRO28630Q6UXU0 137 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 BOD1L2Q8IYS8 172 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 C16orf92Q96LL3 132 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 A6NDX4 124 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 NDUFS8O00217 210 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 SMAD7O15105 426 aaKnown RBP12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 TRBV12-3P01733 135 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 GATA1P15976 413 aaPredicted RBP12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 Q8N8P6 123 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 USMG5Q96IX5 58 aa12.25□□□□□ -0.45
HLA-DQB2-231ENST00000435145 CD5LO43866 347 aa12.24□□□□□ -0.45
HLA-DQB2-231ENST00000435145 IGHV4-38-2P0DP08 117 aa12.24□□□□□ -0.45
HLA-DQB2-231ENST00000435145 EVI2AP22794 236 aa12.24□□□□□ -0.45
HLA-DQB2-231ENST00000435145 LEPP41159 167 aa12.24□□□□□ -0.45
HLA-DQB2-231ENST00000435145 PRR9Q5T870 116 aa12.24□□□□□ -0.45
HLA-DQB2-231ENST00000435145 ZMAT4Q9H898 229 aa12.24□□□□□ -0.45
HLA-DQB2-231ENST00000435145 Q6ZQT7 251 aa12.23□□□□□ -0.45
HLA-DQB2-231ENST00000435145 NRACQ8N912 160 aa12.23□□□□□ -0.45
HLA-DQB2-231ENST00000435145 OR2K2Q8NGT1 345 aa12.23□□□□□ -0.45
HLA-DQB2-231ENST00000435145 ZFAND2AQ8N6M9 145 aa12.23□□□□□ -0.45
HLA-DQB2-231ENST00000435145 LINC00477Q96M19 166 aa12.23□□□□□ -0.45
HLA-DQB2-231ENST00000435145 CCL19Q99731 98 aa12.23□□□□□ -0.45
HLA-DQB2-231ENST00000435145 AKAP6Q13023 2319 aa12.22□□□□□ -0.45
HLA-DQB2-231ENST00000435145 OVOL1O14753 267 aa12.21□□□□□ -0.45
HLA-DQB2-231ENST00000435145 SIVA1O15304 175 aa12.21□□□□□ -0.45
HLA-DQB2-231ENST00000435145 ODF1Q14990 250 aa12.21□□□□□ -0.45
HLA-DQB2-231ENST00000435145 TMEM97Q5BJF2 176 aa12.21□□□□□ -0.45
HLA-DQB2-231ENST00000435145 PSMG4Q5JS54 123 aa12.21□□□□□ -0.45
HLA-DQB2-231ENST00000435145 SMIM15Q7Z3B0 74 aa12.21□□□□□ -0.45
HLA-DQB2-231ENST00000435145 OR9G4Q8NGQ1 327 aa12.21□□□□□ -0.45
HLA-DQB2-231ENST00000435145 DKK2Q9UBU2 259 aa12.21□□□□□ -0.45
HLA-DQB2-231ENST00000435145 SEC11AP67812 179 aa12.21□□□□□ -0.46
HLA-DQB2-231ENST00000435145 FAM19A4Q96LR4 140 aa12.21□□□□□ -0.46
HLA-DQB2-231ENST00000435145 H3BUX3 64 aa12.2□□□□□ -0.46
HLA-DQB2-231ENST00000435145 WFDC3Q8IUB2 231 aa12.2□□□□□ -0.46
HLA-DQB2-231ENST00000435145 IGLV1-40P01703 118 aa12.2□□□□□ -0.46
HLA-DQB2-231ENST00000435145 LY6EQ16553 131 aa12.2□□□□□ -0.46
HLA-DQB2-231ENST00000435145 CLEC2AQ6UVW9 174 aa12.2□□□□□ -0.46
HLA-DQB2-231ENST00000435145 APRG1Q8IVJ8 170 aa12.2□□□□□ -0.46
HLA-DQB2-231ENST00000435145 TMEM158Q8WZ71 300 aa12.2□□□□□ -0.46
HLA-DQB2-231ENST00000435145 C18orf15Q96N68 181 aa12.2□□□□□ -0.46
HLA-DQB2-231ENST00000435145 KLK15Q9H2R5 256 aa12.2□□□□□ -0.46
HLA-DQB2-231ENST00000435145 IGHV4-30-2A0A087WSY4 118 aa12.19□□□□□ -0.46
HLA-DQB2-231ENST00000435145 HHLA3Q9XRX5 114 aa12.19□□□□□ -0.46
HLA-DQB2-231ENST00000435145 H3BVH4 76 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 K7EP13 123 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 MSMBP08118 114 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 CFHR3Q02985 330 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 VAMP3Q15836 100 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 SPANXN1Q5VSR9 72 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 OR10J6PQ8NGY7 276 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 MRAP2Q96G30 205 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 ACACBO00763 2458 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 TRBV7-9A0A0J9YWB2 115 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 ATP5J2P56134 94 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 BLCAPP62952 87 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 ADAMTSL5Q6ZMM2 481 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 UFC1Q9Y3C8 167 aa12.18□□□□□ -0.46
HLA-DQB2-231ENST00000435145 TRAV21A0A0B4J279 112 aa12.17□□□□□ -0.46
HLA-DQB2-231ENST00000435145 A1L4Q6 167 aa12.17□□□□□ -0.46
HLA-DQB2-231ENST00000435145 ATP5LO75964 103 aa12.17□□□□□ -0.46
HLA-DQB2-231ENST00000435145 HSD52Q0P140 79 aa12.17□□□□□ -0.46
HLA-DQB2-231ENST00000435145 KIR3DS1Q14943 382 aa12.17□□□□□ -0.46
HLA-DQB2-231ENST00000435145 Q6ZS46 218 aa12.17□□□□□ -0.46
HLA-DQB2-231ENST00000435145 OR4X2Q8NGF9 303 aa12.17□□□□□ -0.46
HLA-DQB2-231ENST00000435145 SMPXQ9UHP9 88 aa12.17□□□□□ -0.46
HLA-DQB2-231ENST00000435145 TRAV26-2A0A0B4J265 109 aa12.16□□□□□ -0.46
HLA-DQB2-231ENST00000435145 CBY3A6NI87 242 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms