RNA–Protein interactions for RNA: ENST00000434735.6

UBE3B-203, Transcript of ubiquitin protein ligase E3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBE3B, Length 5,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-203ENST00000434735 ZNF625Q96I27 306 aaPredicted RBP9.62□□□□□ -0.87
UBE3B-203ENST00000434735 TRPT1Q86TN4 253 aaKnown RBP9.62□□□□□ -0.87
UBE3B-203ENST00000434735 TNCP24821 2201 aa9.62□□□□□ -0.87
UBE3B-203ENST00000434735 IGHV3-30P01768 117 aa9.62□□□□□ -0.87
UBE3B-203ENST00000434735 IGHV3-33P01772 117 aa9.62□□□□□ -0.87
UBE3B-203ENST00000434735 IGHV3-30-3P0DP02 117 aa9.62□□□□□ -0.87
UBE3B-203ENST00000434735 IGHV3-30-5P0DP03 117 aa9.62□□□□□ -0.87
UBE3B-203ENST00000434735 KLF5Q13887 457 aaPredicted RBP9.62□□□□□ -0.87
UBE3B-203ENST00000434735 ANKHD1Q8IWZ3 2542 aaKnown RBP9.62□□□□□ -0.87
UBE3B-203ENST00000434735 A8MXK9 166 aa9.62□□□□□ -0.87
UBE3B-203ENST00000434735 KIF26AQ9ULI4 1882 aaPredicted RBP9.61□□□□□ -0.87
UBE3B-203ENST00000434735 NUP210Q8TEM1 1887 aaPredicted RBP9.61□□□□□ -0.87
UBE3B-203ENST00000434735 ESDP10768 282 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 THAP8Q8NA92 274 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 CARHSP1Q9Y2V2 147 aaKnown RBP9.61□□□□□ -0.87
UBE3B-203ENST00000434735 PRRC2AP48634 2157 aaKnown RBP9.61□□□□□ -0.87
UBE3B-203ENST00000434735 ETV2O00321 342 aaPredicted RBP9.61□□□□□ -0.87
UBE3B-203ENST00000434735 CRLF1O75462 422 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 GAGE2EQ4V326 116 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 C11orf45Q8TAV5 145 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 TMEM170AQ8WVE7 144 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 C1orf43Q9BWL3 253 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 GAGE2DQ9UEU5 116 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 IFITM2Q01629 132 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 INSL3P51460 131 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 FAM110AQ9BQ89 295 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 LAMTOR2Q9Y2Q5 125 aa9.61□□□□□ -0.87
UBE3B-203ENST00000434735 TRAV8-1A0A0A6YYK1 113 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 LRRK1Q38SD2 2015 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 COL4A3Q01955 1670 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 HSD52Q0P140 79 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 LINC00311Q8N616 119 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 SPXQ9BT56 116 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 FNDC4Q9H6D8 234 aaPredicted RBP9.6□□□□□ -0.87
UBE3B-203ENST00000434735 PKIGQ9Y2B9 76 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 JMJD1CQ15652 2540 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 PRR31Q5SQ13 230 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 MEGF9Q9H1U4 602 aa9.6□□□□□ -0.87
UBE3B-203ENST00000434735 AJUBAQ96IF1 538 aa9.59□□□□□ -0.87
UBE3B-203ENST00000434735 ICOSQ9Y6W8 199 aa9.59□□□□□ -0.87
UBE3B-203ENST00000434735 SHANK2-AS3Q9BTD1 123 aa9.59□□□□□ -0.87
UBE3B-203ENST00000434735 PMVKQ15126 192 aa9.59□□□□□ -0.87
UBE3B-203ENST00000434735 OR11H6Q8NGC7 330 aa9.59□□□□□ -0.87
UBE3B-203ENST00000434735 RNF222A6NCQ9 220 aa9.59□□□□□ -0.87
UBE3B-203ENST00000434735 DEFB125Q8N687 156 aa9.59□□□□□ -0.87
UBE3B-203ENST00000434735 F6UB75 175 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 C2orf82Q6UX34 121 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 SPATA25Q9BR10 227 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 TP53BP1Q12888 1972 aaPredicted RBP9.58□□□□□ -0.88
UBE3B-203ENST00000434735 ARMS2P0C7Q2 107 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 HILS1P60008 231 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 GSN-AS1Q9NRJ2 163 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 KRTAP10-9P60411 292 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 ZNF524Q96C55 264 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 MGST2Q99735 147 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 TRBV6-6A0A0A6YYG2 114 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 YPEL3P61236 119 aaPredicted RBP9.58□□□□□ -0.88
UBE3B-203ENST00000434735 C4orf3Q8WVX3 66 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 C2orf16Q68DN1 1984 aa9.58□□□□□ -0.88
UBE3B-203ENST00000434735 HIST2H2BDQ6DRA6 164 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 TMEM243Q9BU79 118 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 SHANK1Q9Y566 2161 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 TAL2Q16559 108 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 FOXI2Q6ZQN5 318 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 ANAPC13Q9BS18 74 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 TRAV8-3A0A0A6YYJ7 113 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 SPRY2O43597 315 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 MRPL23Q16540 153 aaKnown RBP9.57□□□□□ -0.88
UBE3B-203ENST00000434735 SAMD5Q5TGI4 173 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 RNF126Q9BV68 326 aa9.57□□□□□ -0.88
UBE3B-203ENST00000434735 PFN2P35080 140 aa9.56□□□□□ -0.88
UBE3B-203ENST00000434735 PDE6HQ13956 83 aa9.56□□□□□ -0.88
UBE3B-203ENST00000434735 ZNF134P52741 427 aa9.56□□□□□ -0.88
UBE3B-203ENST00000434735 ATP6V0BQ99437 205 aa9.56□□□□□ -0.88
UBE3B-203ENST00000434735 AGMATQ9BSE5 352 aa9.56□□□□□ -0.88
UBE3B-203ENST00000434735 HELZP42694 1942 aaKnown RBP9.56□□□□□ -0.88
UBE3B-203ENST00000434735 PFN1P07737 140 aaKnown RBP9.56□□□□□ -0.88
UBE3B-203ENST00000434735 NMSQ5H8A3 153 aa9.56□□□□□ -0.88
UBE3B-203ENST00000434735 U3KQE9 123 aa9.56□□□□□ -0.88
UBE3B-203ENST00000434735 FASNP49327 2511 aaKnown RBP9.55□□□□□ -0.88
UBE3B-203ENST00000434735 ANAPC1Q9H1A4 1944 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 SMIM2Q9BVW6 85 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 NDUFA4L2Q9NRX3 87 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 DYSFO75923 2080 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 TRAV25A0A0B4J276 109 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 GYPEP15421 78 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 RHOHQ15669 191 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 VSIRQ9H7M9 311 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 C1orf194Q5T5A4 169 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 C5orf56Q8N8D9 126 aa9.55□□□□□ -0.88
UBE3B-203ENST00000434735 M0R2N4 97 aa9.54□□□□□ -0.88
UBE3B-203ENST00000434735 LRRK2Q5S007 2527 aa9.54□□□□□ -0.88
UBE3B-203ENST00000434735 RPL18AQ02543 176 aaKnown RBP9.54□□□□□ -0.88
UBE3B-203ENST00000434735 PRSS29PA6NIE9 313 aa9.54□□□□□ -0.88
UBE3B-203ENST00000434735 GAGE2BQ13066 116 aa9.54□□□□□ -0.88
UBE3B-203ENST00000434735 LAIR2Q6ISS4 152 aa9.54□□□□□ -0.88
UBE3B-203ENST00000434735 PIEZO2Q9H5I5 2752 aa9.54□□□□□ -0.88
UBE3B-203ENST00000434735 IGHV7-81A0A0B4J1V7 117 aa9.54□□□□□ -0.88
UBE3B-203ENST00000434735 GAGE2AQ6NT46 116 aa9.54□□□□□ -0.88
UBE3B-203ENST00000434735 NEGR1Q7Z3B1 354 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms