RNA–Protein interactions for RNA: ENST00000434601.7

LINC00539-203, long intergenic non-protein coding RNA 539, humanhuman

TSL 5 BASIC

Gene LINC00539, Length 960 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00539-203ENST00000434601 DEFB131AP59861 70 aa8.38□□□□□ -1.07
LINC00539-203ENST00000434601 SMUG1Q53HV7 270 aa8.38□□□□□ -1.07
LINC00539-203ENST00000434601 C9orf66Q5T8R8 295 aa8.38□□□□□ -1.07
LINC00539-203ENST00000434601 GDF5OSQ5U4N7 250 aa8.38□□□□□ -1.07
LINC00539-203ENST00000434601 EBLN2Q6P2I7 272 aa8.38□□□□□ -1.07
LINC00539-203ENST00000434601 FOXI2Q6ZQN5 318 aa8.38□□□□□ -1.07
LINC00539-203ENST00000434601 SAV1Q9H4B6 383 aaPredicted RBP8.38□□□□□ -1.07
LINC00539-203ENST00000434601 TUBA4BQ9H853 241 aa8.38□□□□□ -1.07
LINC00539-203ENST00000434601 TRBV7-9A0A0J9YWB2 115 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 A0A0J9YX75 114 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 C19orf71A6NCJ1 209 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 CXorf65A6NEN9 183 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 ZNF705GA8MUZ8 300 aaPredicted RBP8.37□□□□□ -1.07
LINC00539-203ENST00000434601 GATCO43716 136 aaKnown RBP8.37□□□□□ -1.07
LINC00539-203ENST00000434601 DUSP14O95147 198 aaKnown RBP8.37□□□□□ -1.07
LINC00539-203ENST00000434601 INSL3P51460 131 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 LINC00322Q6ZN03 302 aaPredicted RBP8.37□□□□□ -1.07
LINC00539-203ENST00000434601 DAZAP1Q96EP5 407 aaKnown RBP8.37□□□□□ -1.07
LINC00539-203ENST00000434601 FAM19A4Q96LR4 140 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 WWC2-AS2Q96NR7 200 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 ODF3Q96PU9 254 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 B9D2Q9BPU9 175 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 V9GYV3 84 aa8.37□□□□□ -1.07
LINC00539-203ENST00000434601 SH2D1AO60880 128 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 P01737 135 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 HLA-DRB4P13762 266 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 KRTAP10-11P60412 298 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 ODF3L2Q3SX64 289 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 FAM162BQ5T6X4 162 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 NUDT10Q8NFP7 164 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 OR4B1Q8NGF8 309 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 NUDT11Q96G61 164 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 IMMP2LQ96T52 175 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 RPP21Q9H633 154 aaKnown RBP8.36□□□□□ -1.07
LINC00539-203ENST00000434601 IL36BQ9NZH7 164 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 HLA-DRB4X5D2U9 266 aa8.36□□□□□ -1.07
LINC00539-203ENST00000434601 KNCNA6PVL3 124 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 OR11H12B2RN74 326 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 CRISP2P16562 243 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 S100PP25815 95 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 CRIP1P50238 77 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 ZNF80P51504 273 aaPredicted RBP8.35□□□□□ -1.07
LINC00539-203ENST00000434601 CMC4P56277 68 aaPredicted RBP8.35□□□□□ -1.07
LINC00539-203ENST00000434601 CT83Q5H943 113 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 KCNIP4Q6PIL6 250 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 ZFAND2AQ8N6M9 145 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.35□□□□□ -1.07
LINC00539-203ENST00000434601 YPEL4Q96NS1 127 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 URGCP-MRPS24S4R325 110 aa8.35□□□□□ -1.07
LINC00539-203ENST00000434601 KMT2CQ8NEZ4 4911 aaKnown RBP8.35□□□□□ -1.07
LINC00539-203ENST00000434601 NHLRC4P0CG21 123 aaPredicted RBP8.34□□□□□ -1.07
LINC00539-203ENST00000434601 LEPP41159 167 aa8.34□□□□□ -1.07
LINC00539-203ENST00000434601 ELOBQ15370 118 aa8.34□□□□□ -1.07
LINC00539-203ENST00000434601 ZNF124Q15973 351 aa8.34□□□□□ -1.07
LINC00539-203ENST00000434601 ACTL10Q5JWF8 245 aa8.34□□□□□ -1.07
LINC00539-203ENST00000434601 PRR9Q5T870 116 aa8.34□□□□□ -1.07
LINC00539-203ENST00000434601 APRG1Q8IVJ8 170 aa8.34□□□□□ -1.07
LINC00539-203ENST00000434601 A8MTW9 85 aa8.33□□□□□ -1.08
LINC00539-203ENST00000434601 H3BMM0 161 aa8.33□□□□□ -1.08
LINC00539-203ENST00000434601 CA1P00915 261 aaPredicted RBP8.33□□□□□ -1.08
LINC00539-203ENST00000434601 IGKV3-20P01619 116 aa8.33□□□□□ -1.08
LINC00539-203ENST00000434601 PFN1P07737 140 aaKnown RBP8.33□□□□□ -1.08
LINC00539-203ENST00000434601 OR2D3Q8NGH3 330 aa8.33□□□□□ -1.08
LINC00539-203ENST00000434601 FAM110AQ9BQ89 295 aa8.33□□□□□ -1.08
LINC00539-203ENST00000434601 SORL1Q92673 2214 aa8.33□□□□□ -1.08
LINC00539-203ENST00000434601 TRAV21A0A0B4J279 112 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 A0A1W2PPQ1 181 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 COLCA2A8K830 154 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 FABP5P3A8MUU1 101 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 KLLNB2CW77 178 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 J3KRW8 73 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 GPX1P07203 203 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 CD7P09564 240 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 TSPOP30536 169 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 RPL19P84098 196 aaKnown RBP8.32□□□□□ -1.08
LINC00539-203ENST00000434601 AMTNQ6UX39 209 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 TSKUQ8WUA8 353 aa8.32□□□□□ -1.08
LINC00539-203ENST00000434601 TRBV24-1A0A075B6N3 115 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 TRAV9-1A0A075B6T8 112 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 TGIF2-C20orf24A0A0A6YYL0 155 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 SMIM27A0A1W2PRY6 76 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 TMEM189A5PLL7 270 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 RBMY1BA6NDE4 496 aaKnown RBP8.31□□□□□ -1.08
LINC00539-203ENST00000434601 RBMY1EA6NEQ0 496 aaKnown RBP8.31□□□□□ -1.08
LINC00539-203ENST00000434601 A8MWL6 223 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 CXCL1P09341 107 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 RBMY1DP0C7P1 496 aaKnown RBP8.31□□□□□ -1.08
LINC00539-203ENST00000434601 CDKN1BP46527 198 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 TCL1AP56279 114 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 FAM3BP58499 235 aaPredicted RBP8.31□□□□□ -1.08
LINC00539-203ENST00000434601 RPS20P60866 119 aaKnown RBP8.31□□□□□ -1.08
LINC00539-203ENST00000434601 SPINK13Q1W4C9 94 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 LINC01559Q495D7 138 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 Q6AWC8 147 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 STHQ8IWL8 128 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 BTF3L4Q96K17 158 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 NEU1Q99519 415 aa8.31□□□□□ -1.08
LINC00539-203ENST00000434601 XKRY2A2RUG3 117 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 C7orf71A4D174 169 aa8.3□□□□□ -1.08
LINC00539-203ENST00000434601 M0R2Z0 102 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms