RNA–Protein interactions for RNA: ENST00000434407.6

HLA-F-220, Transcript of major histocompatibility complex, class I, F, humanhuman

BASIC

Gene HLA-F, Length 884 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-220ENST00000434407 TMEM263Q8WUH6 116 aaKnown RBP13.09□□□□□ -0.31
HLA-F-220ENST00000434407 MBD3L1Q8WWY6 194 aa13.09□□□□□ -0.31
HLA-F-220ENST00000434407 MAP1LC3BQ9GZQ8 125 aa13.09□□□□□ -0.31
HLA-F-220ENST00000434407 RYR3Q15413 4870 aa13.08□□□□□ -0.31
HLA-F-220ENST00000434407 TRAV10A0A0B4J240 114 aa13.08□□□□□ -0.32
HLA-F-220ENST00000434407 LCE6AA0A183 80 aa13.08□□□□□ -0.32
HLA-F-220ENST00000434407 LYRM9A8MSI8 78 aa13.08□□□□□ -0.32
HLA-F-220ENST00000434407 RNASE4P34096 147 aaKnown RBP13.08□□□□□ -0.32
HLA-F-220ENST00000434407 SUMO1P63165 101 aaKnown RBP13.08□□□□□ -0.32
HLA-F-220ENST00000434407 DPPA3Q6W0C5 159 aa13.08□□□□□ -0.32
HLA-F-220ENST00000434407 TCRAP04437 139 aa13.07□□□□□ -0.32
HLA-F-220ENST00000434407 HTN1P15515 57 aa13.07□□□□□ -0.32
HLA-F-220ENST00000434407 EPDR1Q9UM22 224 aa13.07□□□□□ -0.32
HLA-F-220ENST00000434407 RPH3ALQ9UNE2 315 aa13.07□□□□□ -0.32
HLA-F-220ENST00000434407 TRAV8-1A0A0A6YYK1 113 aa13.06□□□□□ -0.32
HLA-F-220ENST00000434407 FAM74A7A6NL05 159 aa13.06□□□□□ -0.32
HLA-F-220ENST00000434407 ANXA2RQ3ZCQ2 193 aa13.06□□□□□ -0.32
HLA-F-220ENST00000434407 Q6AWC8 147 aa13.06□□□□□ -0.32
HLA-F-220ENST00000434407 EIF5AL1Q6IS14 154 aaKnown RBP13.06□□□□□ -0.32
HLA-F-220ENST00000434407 IQCF2Q8IXL9 164 aa13.06□□□□□ -0.32
HLA-F-220ENST00000434407 C2CD4CQ8TF44 421 aa13.06□□□□□ -0.32
HLA-F-220ENST00000434407 TVP23CQ96ET8 276 aa13.06□□□□□ -0.32
HLA-F-220ENST00000434407 NKX6-2Q9C056 277 aaPredicted RBP13.06□□□□□ -0.32
HLA-F-220ENST00000434407 TIMM8BQ9Y5J9 83 aaPredicted RBP13.06□□□□□ -0.32
HLA-F-220ENST00000434407 RYR2Q92736 4967 aa13.06□□□□□ -0.32
HLA-F-220ENST00000434407 IGLV2-11P01706 119 aa13.05□□□□□ -0.32
HLA-F-220ENST00000434407 ALKAL2Q6UX46 152 aa13.05□□□□□ -0.32
HLA-F-220ENST00000434407 Q6ZQT7 251 aa13.05□□□□□ -0.32
HLA-F-220ENST00000434407 CCDC28AQ8IWP9 274 aa13.05□□□□□ -0.32
HLA-F-220ENST00000434407 FAM213BQ8TBF2 198 aa13.05□□□□□ -0.32
HLA-F-220ENST00000434407 ARL2-SNX15V9GYD0 113 aa13.05□□□□□ -0.32
HLA-F-220ENST00000434407 DEFB131BA0A096LNP1 70 aa13.04□□□□□ -0.32
HLA-F-220ENST00000434407 TCTAP57738 103 aa13.04□□□□□ -0.32
HLA-F-220ENST00000434407 EIF4E3Q8N5X7 224 aaKnown RBP13.04□□□□□ -0.32
HLA-F-220ENST00000434407 CYB561D1Q8N8Q1 229 aa13.04□□□□□ -0.32
HLA-F-220ENST00000434407 ATG101Q9BSB4 218 aa13.04□□□□□ -0.32
HLA-F-220ENST00000434407 RAB5CP51148 216 aa13.03□□□□□ -0.32
HLA-F-220ENST00000434407 UBE2G2P60604 165 aa13.03□□□□□ -0.32
HLA-F-220ENST00000434407 DAD1P61803 113 aa13.03□□□□□ -0.32
HLA-F-220ENST00000434407 LINC00612Q8N6U2 182 aa13.03□□□□□ -0.32
HLA-F-220ENST00000434407 TMEM75Q8N9X5 138 aa13.03□□□□□ -0.32
HLA-F-220ENST00000434407 C11orf72Q8NBR9 251 aa13.03□□□□□ -0.32
HLA-F-220ENST00000434407 SFT2D1Q8WV19 159 aa13.03□□□□□ -0.32
HLA-F-220ENST00000434407 IGHV1OR15-1A0A075B7D0 117 aa13.02□□□□□ -0.33
HLA-F-220ENST00000434407 FBLL1A6NHQ2 334 aaKnown RBP13.02□□□□□ -0.33
HLA-F-220ENST00000434407 K7EQM0 130 aa13.02□□□□□ -0.33
HLA-F-220ENST00000434407 RAB14P61106 215 aa13.02□□□□□ -0.33
HLA-F-220ENST00000434407 DAZ2Q13117 558 aaKnown RBP13.02□□□□□ -0.33
HLA-F-220ENST00000434407 NOP10Q9NPE3 64 aaKnown RBP13.02□□□□□ -0.33
HLA-F-220ENST00000434407 PSG8Q9UQ74 426 aa13.02□□□□□ -0.33
HLA-F-220ENST00000434407 MUC4Q99102 2169 aa13.02□□□□□ -0.33
HLA-F-220ENST00000434407 KMT2AQ03164 3969 aa13.01□□□□□ -0.33
HLA-F-220ENST00000434407 VPS13DQ5THJ4 4388 aa13.01□□□□□ -0.33
HLA-F-220ENST00000434407 H2AFB1P0C5Y9 115 aa13.01□□□□□ -0.33
HLA-F-220ENST00000434407 SULT1A2P50226 295 aa13.01□□□□□ -0.33
HLA-F-220ENST00000434407 HIST1H2BAQ96A08 127 aa13.01□□□□□ -0.33
HLA-F-220ENST00000434407 SGK494Q96LW2 274 aa13.01□□□□□ -0.33
HLA-F-220ENST00000434407 TREM1Q9NP99 234 aa13.01□□□□□ -0.33
HLA-F-220ENST00000434407 APLNQ9ULZ1 77 aa13.01□□□□□ -0.33
HLA-F-220ENST00000434407 HYDINQ4G0P3 5121 aa13.01□□□□□ -0.33
HLA-F-220ENST00000434407 TRAV1-1A0A0B4J248 108 aa13□□□□□ -0.33
HLA-F-220ENST00000434407 IGLL5B9A064 214 aa13□□□□□ -0.33
HLA-F-220ENST00000434407 PEX7O00628 323 aa13□□□□□ -0.33
HLA-F-220ENST00000434407 FLI1Q01543 452 aaPredicted RBP13□□□□□ -0.33
HLA-F-220ENST00000434407 IBA57Q5T440 356 aaKnown RBP13□□□□□ -0.33
HLA-F-220ENST00000434407 LINC00476Q8WZB0 136 aa13□□□□□ -0.33
HLA-F-220ENST00000434407 TCEAL7Q9BRU2 100 aa13□□□□□ -0.33
HLA-F-220ENST00000434407 IGHV4-4A0A075B6R2 117 aa12.99□□□□□ -0.33
HLA-F-220ENST00000434407 CBY3A6NI87 242 aa12.99□□□□□ -0.33
HLA-F-220ENST00000434407 SNURFLB1AK76 121 aa12.99□□□□□ -0.33
HLA-F-220ENST00000434407 TDRG1Q3Y452 100 aa12.99□□□□□ -0.33
HLA-F-220ENST00000434407 FAM210BQ96KR6 192 aa12.99□□□□□ -0.33
HLA-F-220ENST00000434407 LINC00479Q96M42 142 aa12.99□□□□□ -0.33
HLA-F-220ENST00000434407 TP53TG3Q9ULZ0 132 aa12.99□□□□□ -0.33
HLA-F-220ENST00000434407 PAGE4O60829 102 aa12.98□□□□□ -0.33
HLA-F-220ENST00000434407 DEFB130BP0DP73 79 aa12.98□□□□□ -0.33
HLA-F-220ENST00000434407 DEFB130AP0DP74 79 aa12.98□□□□□ -0.33
HLA-F-220ENST00000434407 SMCPP49901 116 aaPredicted RBP12.98□□□□□ -0.33
HLA-F-220ENST00000434407 TCL1AP56279 114 aa12.98□□□□□ -0.33
HLA-F-220ENST00000434407 CLLU1Q5K131 121 aa12.98□□□□□ -0.33
HLA-F-220ENST00000434407 C8orf49Q96NF6 230 aa12.98□□□□□ -0.33
HLA-F-220ENST00000434407 NDFIP1Q9BT67 221 aa12.98□□□□□ -0.33
HLA-F-220ENST00000434407 GSN-AS1Q9NRJ2 163 aa12.98□□□□□ -0.33
HLA-F-220ENST00000434407 TRAV21A0A0B4J279 112 aa12.97□□□□□ -0.33
HLA-F-220ENST00000434407 F6UZH7 168 aa12.97□□□□□ -0.33
HLA-F-220ENST00000434407 ATP5G3P48201 142 aa12.97□□□□□ -0.33
HLA-F-220ENST00000434407 PPT1P50897 306 aa12.97□□□□□ -0.33
HLA-F-220ENST00000434407 CST9LP1Q5W188 147 aa12.97□□□□□ -0.33
HLA-F-220ENST00000434407 PRNTQ86SH4 94 aa12.97□□□□□ -0.33
HLA-F-220ENST00000434407 KLF12Q9Y4X4 402 aa12.97□□□□□ -0.33
HLA-F-220ENST00000434407 TRAV34A0A0B4J273 112 aa12.96□□□□□ -0.33
HLA-F-220ENST00000434407 A0A1B0GV50 99 aa12.96□□□□□ -0.33
HLA-F-220ENST00000434407 ZNF80P51504 273 aaPredicted RBP12.96□□□□□ -0.33
HLA-F-220ENST00000434407 NDUFA5Q16718 116 aa12.96□□□□□ -0.33
HLA-F-220ENST00000434407 MUC21Q5SSG8 566 aa12.96□□□□□ -0.33
HLA-F-220ENST00000434407 SAPCD1Q5SSQ6 148 aa12.96□□□□□ -0.33
HLA-F-220ENST00000434407 LGALS9CQ6DKI2 356 aa12.96□□□□□ -0.33
HLA-F-220ENST00000434407 DNAH6Q9C0G6 4158 aa12.95□□□□□ -0.34
HLA-F-220ENST00000434407 TRBV6-1A0A0K0K1D8 114 aa12.95□□□□□ -0.34
HLA-F-220ENST00000434407 SPINK4O60575 86 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms