RNA–Protein interactions for RNA: ENST00000433888.5

PTPN4-205, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 954 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-205ENST00000433888 FAM236BA0A1B0GV22 79 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 K7ERU9 68 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 M0R2Z0 102 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 INE1O15225 51 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 NUPR1O60356 82 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 SMIM24O75264 130 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 CD3DP04234 171 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 DBIP07108 87 aaKnown RBP0.89□□□□□ -2.27
PTPN4-205ENST00000433888 SCTP09683 121 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 IGLC6P0CF74 106 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 COX4I1P13073 169 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 KRTAP21-3Q3LHN1 58 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 GLIPR1L1Q6UWM5 242 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 LINC00322Q6ZN03 302 aaPredicted RBP0.89□□□□□ -2.27
PTPN4-205ENST00000433888 C10orf111Q8N326 155 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 DNAJC15Q9Y5T4 150 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 CEP152O94986 1710 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 PHRF1Q9P1Y6 1649 aaKnown RBP0.89□□□□□ -2.27
PTPN4-205ENST00000433888 TENM3Q9P273 2699 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 SOGA1O94964 1423 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 TNS3Q68CZ2 1445 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 KIAA1107Q9UPP5 1409 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 CCDC171Q6TFL3 1326 aa0.89□□□□□ -2.27
PTPN4-205ENST00000433888 EML5Q05BV3 1969 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 E9PCH4 1651 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 FREM3P0C091 2139 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 COL1A1P02452 1464 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-205ENST00000433888 RFX7Q2KHR2 1363 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 BORCS7-ASMTA0A0B4J1R7 106 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 TRAV17A0A0B4J275 112 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 JMJD7-PLA2G4BH0Y9G9 81 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 SAA1P0DJI8 122 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-205ENST00000433888 AKR1D1P51857 326 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 KRTAP10-4P60372 401 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-205ENST00000433888 QRFPP83859 136 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 HAGHLQ6PII5 290 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-205ENST00000433888 TMEM91Q6ZNR0 172 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 OR8J3Q8NGG0 315 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 ZNF431Q8TF32 576 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-205ENST00000433888 CIB3Q96Q77 187 aaPredicted RBP0.88□□□□□ -2.27
PTPN4-205ENST00000433888 PFDN5Q99471 154 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 LPAR5Q9H1C0 372 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 COPZ2Q9P299 210 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 LSM2Q9Y333 95 aaKnown RBP0.88□□□□□ -2.27
PTPN4-205ENST00000433888 AHNAK2Q8IVF2 5795 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 NISCHQ9Y2I1 1504 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 FANCMQ8IYD8 2048 aa0.88□□□□□ -2.27
PTPN4-205ENST00000433888 MYO18AQ92614 2054 aaKnown RBP0.87□□□□□ -2.27
PTPN4-205ENST00000433888 BBIP1A8MTZ0 92 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 M0R2N4 97 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 IGLV3-1P01715 115 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 MPC1LP0DKB6 136 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 ARL14EPLP0DKL9 152 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 CCL4P13236 92 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 HLA-DRB4P13762 266 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 KDELR1P24390 212 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 SRP9P49458 86 aaKnown RBP0.87□□□□□ -2.27
PTPN4-205ENST00000433888 FXYD4P59646 89 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 CCDC58Q4VC31 144 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 OCIAD2Q56VL3 154 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 GLYATL3Q5SZD4 288 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 C3orf62Q6ZUJ4 267 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 DEFB119Q8N690 84 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 OR10AG1Q8NH19 301 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 SMIM7Q9BQ49 75 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 VPS25Q9BRG1 176 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 CYSTM1Q9H1C7 97 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 TPT1P8Q9HAU6 139 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 SPANXA1Q9NS26 97 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 HLA-DRB4X5D2U9 266 aa0.87□□□□□ -2.27
PTPN4-205ENST00000433888 VIRMAQ69YN4 1812 aaKnown RBP0.87□□□□□ -2.27
PTPN4-205ENST00000433888 MYH13Q9UKX3 1938 aa0.86□□□□□ -2.27
PTPN4-205ENST00000433888 A0A1W2PRS3 328 aa0.86□□□□□ -2.27
PTPN4-205ENST00000433888 A6NN06 94 aa0.86□□□□□ -2.27
PTPN4-205ENST00000433888 HIST1H1BP16401 226 aaKnown RBP0.86□□□□□ -2.27
PTPN4-205ENST00000433888 ETV6P41212 452 aa0.86□□□□□ -2.27
PTPN4-205ENST00000433888 MORN2Q502X0 79 aa0.86□□□□□ -2.27
PTPN4-205ENST00000433888 Q86TA4 180 aa0.86□□□□□ -2.27
PTPN4-205ENST00000433888 OR4S1Q8NGB4 309 aa0.86□□□□□ -2.27
PTPN4-205ENST00000433888 MPC1Q9Y5U8 109 aa0.86□□□□□ -2.27
PTPN4-205ENST00000433888 KDM6AO15550 1401 aaPredicted RBP0.86□□□□□ -2.27
PTPN4-205ENST00000433888 SNRNP200O75643 2136 aaKnown RBP0.86□□□□□ -2.27
PTPN4-205ENST00000433888 TET1Q8NFU7 2136 aa0.86□□□□□ -2.27
PTPN4-205ENST00000433888 MYH6P13533 1939 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 KIAA1549LQ6ZVL6 1849 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 A0A1W2PPB8 328 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 NUPR2A6NF83 97 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 KIR3DP1A8MWS1 328 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 NCR3O14931 201 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 LSM3P62310 102 aaKnown RBP0.85□□□□□ -2.27
PTPN4-205ENST00000433888 S100A12P80511 92 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 MIC13Q5XKP0 118 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 SNX29P2Q8IUI4 249 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 RP1L1Q8IWN7 2480 aaPredicted RBP0.85□□□□□ -2.27
PTPN4-205ENST00000433888 CTAGE3PQ8IX95 158 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 TCEAL4Q96EI5 215 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 SLC35B3Q9H1N7 401 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 METTL1Q9UBP6 276 aaKnown RBP0.85□□□□□ -2.27
PTPN4-205ENST00000433888 KIF13AQ9H1H9 1805 aa0.85□□□□□ -2.27
PTPN4-205ENST00000433888 CITO14578 2027 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms