RNA–Protein interactions for RNA: ENST00000433645.1

LINC01239-201, Transcript of long intergenic non-protein coding RNA 1239, humanhuman

TSL 3

Gene LINC01239, Length 325 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01239-201ENST00000433645 MNS1Q8NEH6 495 aa-0.47□□□□□ -2.48
LINC01239-201ENST00000433645 TAF9BQ9HBM6 251 aa-0.47□□□□□ -2.48
LINC01239-201ENST00000433645 OTORQ9NRC9 128 aa-0.47□□□□□ -2.48
LINC01239-201ENST00000433645 AHCTF1Q8WYP5 2266 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 ZCCHC11Q5TAX3 1644 aaKnown RBP-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 LOC107984156A0A0G2JMH3 177 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 C5orf58C9J3I9 102 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 MFSD11O43934 449 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 S100A6P06703 90 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 POU6F1Q14863 301 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 ARL17AQ8IVW1 177 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 LRTM1Q9HBL6 345 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 SS18L2Q9UHA2 77 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 MPC1Q9Y5U8 109 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 NUBP2Q9Y5Y2 271 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 U3KQA8 63 aa-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 NUP210Q8TEM1 1887 aaPredicted RBP-0.48□□□□□ -2.49
LINC01239-201ENST00000433645 LOC101927531A0A1B0GV80 90 aa-0.49□□□□□ -2.49
LINC01239-201ENST00000433645 MCRIP1C9JLW8 97 aa-0.49□□□□□ -2.49
LINC01239-201ENST00000433645 CLEC2BQ92478 149 aa-0.49□□□□□ -2.49
LINC01239-201ENST00000433645 BORCS8Q96FH0 119 aa-0.49□□□□□ -2.49
LINC01239-201ENST00000433645 CHMP6Q96FZ7 201 aa-0.49□□□□□ -2.49
LINC01239-201ENST00000433645 TMEM14BQ9NUH8 114 aa-0.49□□□□□ -2.49
LINC01239-201ENST00000433645 MRPL36Q9P0J6 103 aaKnown RBP-0.49□□□□□ -2.49
LINC01239-201ENST00000433645 EIF3AQ14152 1382 aaKnown RBP-0.49□□□□□ -2.49
LINC01239-201ENST00000433645 FGD6Q6ZV73 1430 aa-0.49□□□□□ -2.49
LINC01239-201ENST00000433645 DLEC1Q9Y238 1755 aa-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 CHD9Q3L8U1 2897 aa-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 FXYD1O00168 92 aa-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 TPT1P13693 172 aaKnown RBP-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 LTC4SQ16873 150 aa-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 CARD19Q96LW7 228 aa-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 BLMP54132 1417 aaPredicted RBP-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 YTHDC2Q9H6S0 1430 aaKnown RBP-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 TCOF1Q13428 1488 aaKnown RBP-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 UNC13BO14795 1591 aa-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 HMCN2Q8NDA2 5059 aa-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 MED13LQ71F56 2210 aa-0.5□□□□□ -2.49
LINC01239-201ENST00000433645 TRDV1A0A1B0GX56 115 aa-0.51□□□□□ -2.49
LINC01239-201ENST00000433645 IFITM5A6NNB3 132 aa-0.51□□□□□ -2.49
LINC01239-201ENST00000433645 MAXP61244 160 aa-0.51□□□□□ -2.49
LINC01239-201ENST00000433645 GNG3P63215 75 aa-0.51□□□□□ -2.49
LINC01239-201ENST00000433645 RPL19P84098 196 aaKnown RBP-0.51□□□□□ -2.49
LINC01239-201ENST00000433645 TMED4Q7Z7H5 227 aa-0.51□□□□□ -2.49
LINC01239-201ENST00000433645 OR5H6Q8NGV6 325 aa-0.51□□□□□ -2.49
LINC01239-201ENST00000433645 DMAC1Q96GE9 116 aa-0.51□□□□□ -2.49
LINC01239-201ENST00000433645 TENM4Q6N022 2769 aa-0.51□□□□□ -2.49
LINC01239-201ENST00000433645 RREB1Q92766 1687 aa-0.52□□□□□ -2.49
LINC01239-201ENST00000433645 DLC1Q96QB1 1528 aa-0.52□□□□□ -2.49
LINC01239-201ENST00000433645 TECPR2O15040 1411 aa-0.52□□□□□ -2.49
LINC01239-201ENST00000433645 TMEM30CPA0ZSE6 113 aa-0.52□□□□□ -2.49
LINC01239-201ENST00000433645 E2F6O75461 281 aa-0.52□□□□□ -2.49
LINC01239-201ENST00000433645 GLRXP35754 106 aa-0.52□□□□□ -2.49
LINC01239-201ENST00000433645 TCTAP57738 103 aa-0.52□□□□□ -2.49
LINC01239-201ENST00000433645 PRELID3AQ96N28 172 aa-0.52□□□□□ -2.49
LINC01239-201ENST00000433645 NCOR1O75376 2440 aa-0.52□□□□□ -2.49
LINC01239-201ENST00000433645 CDK12Q9NYV4 1490 aaPredicted RBP-0.53□□□□□ -2.49
LINC01239-201ENST00000433645 LOC107986453A0A1B0GWG9 222 aa-0.53□□□□□ -2.49
LINC01239-201ENST00000433645 TPST1O60507 370 aa-0.53□□□□□ -2.49
LINC01239-201ENST00000433645 FABP2P12104 132 aa-0.53□□□□□ -2.49
LINC01239-201ENST00000433645 ETV6P41212 452 aa-0.53□□□□□ -2.49
LINC01239-201ENST00000433645 OR8J3Q8NGG0 315 aa-0.53□□□□□ -2.49
LINC01239-201ENST00000433645 AP3S1Q92572 193 aa-0.53□□□□□ -2.49
LINC01239-201ENST00000433645 LAMC3Q9Y6N6 1575 aa-0.53□□□□□ -2.49
LINC01239-201ENST00000433645 ABCA4P78363 2273 aa-0.54□□□□□ -2.5
LINC01239-201ENST00000433645 MPC1LP0DKB6 136 aa-0.54□□□□□ -2.5
LINC01239-201ENST00000433645 SRP9P49458 86 aaKnown RBP-0.54□□□□□ -2.5
LINC01239-201ENST00000433645 RHOHQ15669 191 aa-0.54□□□□□ -2.5
LINC01239-201ENST00000433645 LYPD5Q6UWN5 251 aa-0.54□□□□□ -2.5
LINC01239-201ENST00000433645 FAM213BQ8TBF2 198 aa-0.54□□□□□ -2.5
LINC01239-201ENST00000433645 STOML2Q9UJZ1 356 aa-0.54□□□□□ -2.5
LINC01239-201ENST00000433645 CADP27708 2225 aa-0.54□□□□□ -2.5
LINC01239-201ENST00000433645 A0A0G2JMM0 328 aa-0.55□□□□□ -2.5
LINC01239-201ENST00000433645 TRBV27A0A0K0K1C4 114 aa-0.55□□□□□ -2.5
LINC01239-201ENST00000433645 TMEM189A5PLL7 270 aa-0.55□□□□□ -2.5
LINC01239-201ENST00000433645 BCL2P10415 239 aa-0.55□□□□□ -2.5
LINC01239-201ENST00000433645 SDC2P34741 201 aa-0.55□□□□□ -2.5
LINC01239-201ENST00000433645 SMIM20Q8N5G0 67 aa-0.55□□□□□ -2.5
LINC01239-201ENST00000433645 MED11Q9P086 117 aa-0.55□□□□□ -2.5
LINC01239-201ENST00000433645 COMMD3Q9UBI1 195 aa-0.55□□□□□ -2.5
LINC01239-201ENST00000433645 PGRMC1O00264 195 aaKnown RBP-0.56□□□□□ -2.5
LINC01239-201ENST00000433645 STX19Q8N4C7 294 aa-0.56□□□□□ -2.5
LINC01239-201ENST00000433645 DSCR8Q96T75 97 aa-0.56□□□□□ -2.5
LINC01239-201ENST00000433645 PRR15LQ9BU68 103 aa-0.56□□□□□ -2.5
LINC01239-201ENST00000433645 BIN3Q9NQY0 253 aa-0.56□□□□□ -2.5
LINC01239-201ENST00000433645 LAMTOR2Q9Y2Q5 125 aa-0.56□□□□□ -2.5
LINC01239-201ENST00000433645 UFC1Q9Y3C8 167 aa-0.56□□□□□ -2.5
LINC01239-201ENST00000433645 MYH1P12882 1939 aa-0.56□□□□□ -2.5
LINC01239-201ENST00000433645 CPDO75976 1380 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 GABARAPH6UMI1 98 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 H7BYZ3 331 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 KRTAP6-1Q3LI64 71 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 FAM24BQ8N5W8 94 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 MORN4Q8NDC4 146 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 ATG5Q9H1Y0 275 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 BOLA2Q9H3K6 86 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 ZCCHC6Q5VYS8 1495 aaKnown RBP-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 SOGA1O94964 1423 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 FAM135BQ49AJ0 1406 aa-0.57□□□□□ -2.5
LINC01239-201ENST00000433645 WDR97A6NE52 1622 aa-0.57□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms