RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 BUB1B-PAK6H3BSN5 160 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 DLX4Q92988 240 aaPredicted RBP8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 RALYQ9UKM9 306 aaKnown RBP8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 RAXQ9Y2V3 346 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 TMEM238LA0A1B0GVL6 79 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 PRAC2D3DTV9 90 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 PDE6HQ13956 83 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 TAL2Q16559 108 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 ANXA2RQ3ZCQ2 193 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 MORN3Q6PF18 240 aaPredicted RBP8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 ONECUT1Q9UBC0 465 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 MBD3L4A6NDZ8 208 aaPredicted RBP8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 MBD3L3A6NE82 208 aaPredicted RBP8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 MBD3L5A6NJ08 208 aaPredicted RBP8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 RPL7P18124 248 aaKnown RBP8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 SMCPP49901 116 aaPredicted RBP8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 SPANXN1Q5VSR9 72 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 IL17RELQ6ZVW7 336 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 DYNAPQ8N1N2 210 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 MBD3L2Q8NHZ7 208 aaPredicted RBP8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 CFHR4Q92496 578 aa8.97□□□□□ -0.97
HMGCS1-202ENST00000433297 TRBV7-3A0A075B6L6 115 aa8.96□□□□□ -0.97
HMGCS1-202ENST00000433297 TIMM23O14925 209 aa8.96□□□□□ -0.97
HMGCS1-202ENST00000433297 FHL3Q13643 280 aa8.96□□□□□ -0.97
HMGCS1-202ENST00000433297 PRSS29PA6NIE9 313 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 MFAP4P55083 255 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 DLX6P56179 175 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 Q6ZUT4 128 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 SCGB3A1Q96QR1 104 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 ANAPC13Q9BS18 74 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 FAM215AQ9Y5M1 114 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 IGHV3-49A0A0A0MS15 119 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 ZNF815PA8K554 130 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 SCGB1C2P0DMR2 95 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 PLNP26678 52 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 CFAP126Q5VTH2 177 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 ZNF575Q86XF7 245 aa8.96□□□□□ -0.98
HMGCS1-202ENST00000433297 MGAQ8IWI9 3026 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 VSTM5A8MXK1 200 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 CD59P13987 128 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 BSPH1Q075Z2 132 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 TMEM78Q5T7P6 136 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 Q6ZQT7 251 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 KLHL30-AS1Q8NEE0 82 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 ATMQ13315 3056 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 DMXL1Q9Y485 3027 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 H7C1H1 209 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 EMP1P54849 157 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 KLRD1Q13241 179 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 HIF1ANQ9NWT6 349 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 TECTAO75443 2155 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 KIR2DL4Q99706 377 aa8.95□□□□□ -0.98
HMGCS1-202ENST00000433297 F8VRH5 84 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 LGALS1P09382 135 aaKnown RBP8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 ASCL5Q7RTU5 278 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 C8orf31Q8N9H6 132 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 C21orf62Q9NYP8 219 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 CACNA1HO95180 2353 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 IGLV1-47P01700 117 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 SLC25A16P16260 332 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 PLEKHB2Q96CS7 222 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 PRADC1Q9BSG0 188 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 SMAD5-AS1Q9Y6J3 95 aa8.94□□□□□ -0.98
HMGCS1-202ENST00000433297 IGLV2-18A0A075B6J9 118 aa8.93□□□□□ -0.98
HMGCS1-202ENST00000433297 IGKV3D-20A0A0C4DH25 116 aa8.93□□□□□ -0.98
HMGCS1-202ENST00000433297 RAB1BQ9H0U4 201 aa8.93□□□□□ -0.98
HMGCS1-202ENST00000433297 B5MCH6 92 aa8.93□□□□□ -0.98
HMGCS1-202ENST00000433297 A6NJY4 79 aa8.93□□□□□ -0.98
HMGCS1-202ENST00000433297 FAM90A27PA6NNH2 459 aa8.93□□□□□ -0.98
HMGCS1-202ENST00000433297 ARL3P36405 182 aa8.93□□□□□ -0.98
HMGCS1-202ENST00000433297 C11orf21Q9P2W6 132 aa8.93□□□□□ -0.98
HMGCS1-202ENST00000433297 MED13LQ71F56 2210 aa8.93□□□□□ -0.98
HMGCS1-202ENST00000433297 TSPAN13O95857 204 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 IGHG4P01861 327 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 PRTN3P24158 256 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 H7C2G1 150 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 M0R381 172 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 THBDP07204 575 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 LINC01559Q495D7 138 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 CARD19Q96LW7 228 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 EP300Q09472 2414 aaPredicted RBP8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 NBR2O15453 112 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 C3orf36Q3SXR2 165 aa8.92□□□□□ -0.98
HMGCS1-202ENST00000433297 ARHGAP32A7KAX9 2087 aa8.91□□□□□ -0.98
HMGCS1-202ENST00000433297 NRACQ8N912 160 aa8.91□□□□□ -0.98
HMGCS1-202ENST00000433297 PPDPFLQ8WWR9 84 aa8.91□□□□□ -0.98
HMGCS1-202ENST00000433297 FANCD2OSQ96PS1 177 aa8.91□□□□□ -0.98
HMGCS1-202ENST00000433297 LINC01546A6NGU7 62 aa8.91□□□□□ -0.98
HMGCS1-202ENST00000433297 CDX4O14627 284 aaPredicted RBP8.91□□□□□ -0.98
HMGCS1-202ENST00000433297 TEX29Q8N6K0 151 aa8.91□□□□□ -0.98
HMGCS1-202ENST00000433297 NUP37Q8NFH4 326 aa8.91□□□□□ -0.98
HMGCS1-202ENST00000433297 RNASE6Q93091 150 aaKnown RBP8.91□□□□□ -0.98
HMGCS1-202ENST00000433297 ERG28Q9UKR5 140 aa8.9□□□□□ -0.98
HMGCS1-202ENST00000433297 A8MWV9 139 aa8.9□□□□□ -0.98
HMGCS1-202ENST00000433297 TCL1BO95988 128 aa8.9□□□□□ -0.98
HMGCS1-202ENST00000433297 MGPP08493 103 aa8.9□□□□□ -0.98
HMGCS1-202ENST00000433297 ZFAND6Q6FIF0 208 aa8.9□□□□□ -0.98
HMGCS1-202ENST00000433297 CNFNQ9BYD5 112 aa8.9□□□□□ -0.98
HMGCS1-202ENST00000433297 SVEP1Q4LDE5 3571 aa8.9□□□□□ -0.98
HMGCS1-202ENST00000433297 TRBV20-1A0A075B6N2 111 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms