RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 BTN1A1Q13410 526 aa13.54□□□□□ -0.24
HMGN1-206ENST00000431390 ODF3L2Q3SX64 289 aa13.54□□□□□ -0.24
HMGN1-206ENST00000431390 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
HMGN1-206ENST00000431390 LINC00322Q6ZN03 302 aaPredicted RBP13.54□□□□□ -0.24
HMGN1-206ENST00000431390 CBLN2Q8IUK8 224 aa13.54□□□□□ -0.24
HMGN1-206ENST00000431390 HLA-DRB4P13762 266 aa13.53□□□□□ -0.24
HMGN1-206ENST00000431390 CRISP2P16562 243 aa13.53□□□□□ -0.24
HMGN1-206ENST00000431390 NUDT10Q8NFP7 164 aa13.53□□□□□ -0.24
HMGN1-206ENST00000431390 DAZAP1Q96EP5 407 aaKnown RBP13.53□□□□□ -0.24
HMGN1-206ENST00000431390 NUDT11Q96G61 164 aa13.53□□□□□ -0.24
HMGN1-206ENST00000431390 V9GYV3 84 aa13.53□□□□□ -0.24
HMGN1-206ENST00000431390 HLA-DRB4X5D2U9 266 aa13.53□□□□□ -0.24
HMGN1-206ENST00000431390 A8MTW9 85 aa13.52□□□□□ -0.25
HMGN1-206ENST00000431390 OR11H12B2RN74 326 aa13.52□□□□□ -0.25
HMGN1-206ENST00000431390 CRIP1P50238 77 aa13.52□□□□□ -0.25
HMGN1-206ENST00000431390 FAM162BQ5T6X4 162 aa13.52□□□□□ -0.25
HMGN1-206ENST00000431390 SORL1Q92673 2214 aa13.51□□□□□ -0.25
HMGN1-206ENST00000431390 GATCO43716 136 aaKnown RBP13.51□□□□□ -0.25
HMGN1-206ENST00000431390 P01737 135 aa13.51□□□□□ -0.25
HMGN1-206ENST00000431390 APRG1Q8IVJ8 170 aa13.51□□□□□ -0.25
HMGN1-206ENST00000431390 OR4B1Q8NGF8 309 aa13.51□□□□□ -0.25
HMGN1-206ENST00000431390 IMMP2LQ96T52 175 aa13.51□□□□□ -0.25
HMGN1-206ENST00000431390 ZNF705GA8MUZ8 300 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-206ENST00000431390 ZNF80P51504 273 aaPredicted RBP13.5□□□□□ -0.25
HMGN1-206ENST00000431390 ZFAND2AQ8N6M9 145 aa13.5□□□□□ -0.25
HMGN1-206ENST00000431390 KNCNA6PVL3 124 aa13.49□□□□□ -0.25
HMGN1-206ENST00000431390 FABP5P3A8MUU1 101 aa13.49□□□□□ -0.25
HMGN1-206ENST00000431390 H3BMM0 161 aa13.49□□□□□ -0.25
HMGN1-206ENST00000431390 SH2D1AO60880 128 aa13.49□□□□□ -0.25
HMGN1-206ENST00000431390 LEPP41159 167 aa13.49□□□□□ -0.25
HMGN1-206ENST00000431390 CT83Q5H943 113 aa13.49□□□□□ -0.25
HMGN1-206ENST00000431390 ACTL10Q5JWF8 245 aa13.49□□□□□ -0.25
HMGN1-206ENST00000431390 CLUHP3Q96NS8 147 aa13.49□□□□□ -0.25
HMGN1-206ENST00000431390 RPP21Q9H633 154 aaKnown RBP13.49□□□□□ -0.25
HMGN1-206ENST00000431390 IL36BQ9NZH7 164 aa13.49□□□□□ -0.25
HMGN1-206ENST00000431390 PFN1P07737 140 aaKnown RBP13.49□□□□□ -0.25
HMGN1-206ENST00000431390 AGRNO00468 2067 aa13.48□□□□□ -0.25
HMGN1-206ENST00000431390 KLLNB2CW77 178 aa13.48□□□□□ -0.25
HMGN1-206ENST00000431390 S100PP25815 95 aa13.48□□□□□ -0.25
HMGN1-206ENST00000431390 TSPOP30536 169 aa13.48□□□□□ -0.25
HMGN1-206ENST00000431390 ZNF124Q15973 351 aa13.48□□□□□ -0.25
HMGN1-206ENST00000431390 AMTNQ6UX39 209 aa13.48□□□□□ -0.25
HMGN1-206ENST00000431390 GPX1P07203 203 aa13.47□□□□□ -0.25
HMGN1-206ENST00000431390 CD7P09564 240 aa13.47□□□□□ -0.25
HMGN1-206ENST00000431390 IGLL1P15814 213 aa13.47□□□□□ -0.25
HMGN1-206ENST00000431390 PRR9Q5T870 116 aa13.47□□□□□ -0.25
HMGN1-206ENST00000431390 KCNIP4Q6PIL6 250 aa13.47□□□□□ -0.25
HMGN1-206ENST00000431390 C19orf73Q9NVV2 129 aa13.47□□□□□ -0.25
HMGN1-206ENST00000431390 IGKV3-20P01619 116 aa13.46□□□□□ -0.25
HMGN1-206ENST00000431390 CDKN1BP46527 198 aa13.46□□□□□ -0.25
HMGN1-206ENST00000431390 Q6AWC8 147 aa13.46□□□□□ -0.25
HMGN1-206ENST00000431390 YPEL4Q96NS1 127 aa13.46□□□□□ -0.25
HMGN1-206ENST00000431390 TRAV21A0A0B4J279 112 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 A8MWL6 223 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 ELOBQ15370 118 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 STHQ8IWL8 128 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 OR2D3Q8NGH3 330 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 TSKUQ8WUA8 353 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 URGCP-MRPS24S4R325 110 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 SMIM27A0A1W2PRY6 76 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 G3V4G9 280 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 GTSCR1Q86UQ5 136 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 GFRA4Q9GZZ7 299 aa13.45□□□□□ -0.26
HMGN1-206ENST00000431390 TRAV9-1A0A075B6T8 112 aa13.44□□□□□ -0.26
HMGN1-206ENST00000431390 TMEM189A5PLL7 270 aa13.44□□□□□ -0.26
HMGN1-206ENST00000431390 FAM231BA6NCW3 169 aa13.44□□□□□ -0.26
HMGN1-206ENST00000431390 J3KRW8 73 aa13.44□□□□□ -0.26
HMGN1-206ENST00000431390 CA1P00915 261 aaPredicted RBP13.44□□□□□ -0.26
HMGN1-206ENST00000431390 LINC01559Q495D7 138 aa13.44□□□□□ -0.26
HMGN1-206ENST00000431390 XKRY2A2RUG3 117 aa13.43□□□□□ -0.26
HMGN1-206ENST00000431390 C7orf71A4D174 169 aa13.43□□□□□ -0.26
HMGN1-206ENST00000431390 RBMY1BA6NDE4 496 aaKnown RBP13.43□□□□□ -0.26
HMGN1-206ENST00000431390 RBMY1EA6NEQ0 496 aaKnown RBP13.43□□□□□ -0.26
HMGN1-206ENST00000431390 PRB2P02812 416 aaPredicted RBP13.43□□□□□ -0.26
HMGN1-206ENST00000431390 RBMY1DP0C7P1 496 aaKnown RBP13.43□□□□□ -0.26
HMGN1-206ENST00000431390 RNASE4P34096 147 aaKnown RBP13.43□□□□□ -0.26
HMGN1-206ENST00000431390 RPS20P60866 119 aaKnown RBP13.43□□□□□ -0.26
HMGN1-206ENST00000431390 SPINK13Q1W4C9 94 aa13.43□□□□□ -0.26
HMGN1-206ENST00000431390 TRPT1Q86TN4 253 aaKnown RBP13.43□□□□□ -0.26
HMGN1-206ENST00000431390 BTF3L4Q96K17 158 aa13.43□□□□□ -0.26
HMGN1-206ENST00000431390 TRBV24-1A0A075B6N3 115 aa13.42□□□□□ -0.26
HMGN1-206ENST00000431390 COLCA2A8K830 154 aa13.42□□□□□ -0.26
HMGN1-206ENST00000431390 M0R2Z0 102 aa13.42□□□□□ -0.26
HMGN1-206ENST00000431390 ORM1P02763 201 aa13.42□□□□□ -0.26
HMGN1-206ENST00000431390 FAM3BP58499 235 aaPredicted RBP13.42□□□□□ -0.26
HMGN1-206ENST00000431390 RPL19P84098 196 aaKnown RBP13.42□□□□□ -0.26
HMGN1-206ENST00000431390 KIR3DS1Q14943 382 aa13.42□□□□□ -0.26
HMGN1-206ENST00000431390 PYGO2Q9BRQ0 406 aa13.42□□□□□ -0.26
HMGN1-206ENST00000431390 NEU1Q99519 415 aa13.41□□□□□ -0.26
HMGN1-206ENST00000431390 NAT8BQ9UHF3 227 aa13.41□□□□□ -0.26
HMGN1-206ENST00000431390 A0A1W2PPQ1 181 aa13.41□□□□□ -0.26
HMGN1-206ENST00000431390 AMBPP02760 352 aa13.41□□□□□ -0.26
HMGN1-206ENST00000431390 GFI1BQ5VTD9 330 aa13.41□□□□□ -0.26
HMGN1-206ENST00000431390 C11orf21Q9P2W6 132 aa13.41□□□□□ -0.26
HMGN1-206ENST00000431390 TGIF2-C20orf24A0A0A6YYL0 155 aa13.4□□□□□ -0.26
HMGN1-206ENST00000431390 ZNF324O75467 553 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-206ENST00000431390 CXCL1P09341 107 aa13.4□□□□□ -0.26
HMGN1-206ENST00000431390 FOXA3P55318 350 aaPredicted RBP13.4□□□□□ -0.26
HMGN1-206ENST00000431390 TCL1AP56279 114 aa13.4□□□□□ -0.26
HMGN1-206ENST00000431390 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 152.1 ms