RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 IGHV4OR15-8A0A075B7B6 117 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 A0A087WW49 117 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 F2Z2F3 143 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 NUPR1O60356 82 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 HLA-DQA1P01909 254 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 FAM162BQ5T6X4 162 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 RBPMS2Q6ZRY4 209 aaKnown RBP12.66□□□□□ -0.38
USHBP1-203ENST00000431146 Q8N2B8 174 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 MYOZ3Q8TDC0 251 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 AGPAT4-IT1Q9H0P7 198 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 SMPXQ9UHP9 88 aa12.66□□□□□ -0.38
USHBP1-203ENST00000431146 C20orf202A1L168 122 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 LGALS1P09382 135 aaKnown RBP12.65□□□□□ -0.38
USHBP1-203ENST00000431146 CRISP2P16562 243 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 DEFB136Q30KP8 78 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 KLHDC1Q8N7A1 406 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 WIPF2Q8TF74 440 aaPredicted RBP12.65□□□□□ -0.38
USHBP1-203ENST00000431146 TPPP3Q9BW30 176 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 TP53TG3Q9ULZ0 132 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 SETD2Q9BYW2 2564 aaPredicted RBP12.65□□□□□ -0.38
USHBP1-203ENST00000431146 A0A1B0GXF2 115 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 APCSP02743 223 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 ZNF738Q8NE65 137 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 CLUHP3Q96NS8 147 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 SMR3AQ99954 134 aa12.65□□□□□ -0.38
USHBP1-203ENST00000431146 RBAKDNA6NC62 111 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 SOCS3O14543 225 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 AMBPP02760 352 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 PTTG1IPP53801 180 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 SYNJ2BPP57105 145 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 COX19Q49B96 90 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 TEX29Q8N6K0 151 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 NRN1Q9NPD7 142 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 FBLL1A6NHQ2 334 aaKnown RBP12.64□□□□□ -0.39
USHBP1-203ENST00000431146 HBBP68871 147 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 COX8CQ7Z4L0 72 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 ATP5L2Q7Z4Y8 100 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 UBE2E2Q96LR5 201 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 NDFIP1Q9BT67 221 aa12.64□□□□□ -0.39
USHBP1-203ENST00000431146 TMEM213A2RRL7 107 aa12.63□□□□□ -0.39
USHBP1-203ENST00000431146 TMEM189A5PLL7 270 aa12.63□□□□□ -0.39
USHBP1-203ENST00000431146 K7EMT4 169 aa12.63□□□□□ -0.39
USHBP1-203ENST00000431146 SRIP30626 198 aa12.63□□□□□ -0.39
USHBP1-203ENST00000431146 TMEM78Q5T7P6 136 aa12.63□□□□□ -0.39
USHBP1-203ENST00000431146 RASL11AQ6T310 242 aa12.63□□□□□ -0.39
USHBP1-203ENST00000431146 Q6ZSV7 163 aa12.63□□□□□ -0.39
USHBP1-203ENST00000431146 ORAOV1Q8WV07 137 aa12.63□□□□□ -0.39
USHBP1-203ENST00000431146 MRPL53Q96EL3 112 aaKnown RBP12.63□□□□□ -0.39
USHBP1-203ENST00000431146 OTOGQ6ZRI0 2925 aa12.63□□□□□ -0.39
USHBP1-203ENST00000431146 FAM231BA6NCW3 169 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 ARMS2P0C7Q2 107 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 HOXD3P31249 432 aaPredicted RBP12.62□□□□□ -0.39
USHBP1-203ENST00000431146 IQCJQ1A5X6 159 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 KHDC1LQ5JSQ8 128 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 COL5A1-AS1Q5SY13 56 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 WFDC3Q8IUB2 231 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 TMEM86BQ8N661 226 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 RNF152Q8N8N0 203 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 UFC1Q9Y3C8 167 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 LINC00310P59036 64 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 TCTEX1D4Q5JR98 221 aa12.62□□□□□ -0.39
USHBP1-203ENST00000431146 MUC21A0A0G2JKD1 596 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 MUC21A0A140T8X8 626 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 F6UB75 175 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 ZNF138P52744 262 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 MUC21Q5SSG8 566 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 BAGE3Q86Y29 109 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 DUX3Q96PT4 197 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 CBY3A6NI87 242 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 J3KRW8 73 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 SERF1AO75920 110 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 FOXA3P55318 350 aaPredicted RBP12.61□□□□□ -0.39
USHBP1-203ENST00000431146 Q6ZQT7 251 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 C9orf47Q6ZRZ4 202 aa12.61□□□□□ -0.39
USHBP1-203ENST00000431146 ALKBH7Q9BT30 221 aaPredicted RBP12.61□□□□□ -0.39
USHBP1-203ENST00000431146 ORM1P02763 201 aa12.6□□□□□ -0.39
USHBP1-203ENST00000431146 TFPI2P48307 235 aa12.6□□□□□ -0.39
USHBP1-203ENST00000431146 SLURP1P55000 103 aa12.6□□□□□ -0.39
USHBP1-203ENST00000431146 LYZL1Q6UWQ5 148 aa12.59□□□□□ -0.39
USHBP1-203ENST00000431146 ZNF575Q86XF7 245 aa12.59□□□□□ -0.39
USHBP1-203ENST00000431146 A0A1B0GUT8 65 aa12.59□□□□□ -0.39
USHBP1-203ENST00000431146 FABP5P3A8MUU1 101 aa12.59□□□□□ -0.39
USHBP1-203ENST00000431146 C11orf44Q8N8P7 122 aa12.59□□□□□ -0.39
USHBP1-203ENST00000431146 RCHY1Q96PM5 261 aa12.59□□□□□ -0.39
USHBP1-203ENST00000431146 CLEC5AQ9NY25 188 aa12.59□□□□□ -0.39
USHBP1-203ENST00000431146 SORL1Q92673 2214 aa12.59□□□□□ -0.39
USHBP1-203ENST00000431146 HAX1O00165 279 aa12.58□□□□□ -0.4
USHBP1-203ENST00000431146 RPS20P60866 119 aaKnown RBP12.58□□□□□ -0.4
USHBP1-203ENST00000431146 HIVEP2P31629 2446 aa12.58□□□□□ -0.4
USHBP1-203ENST00000431146 CCL25O15444 150 aa12.58□□□□□ -0.4
USHBP1-203ENST00000431146 HIST1H1AQ02539 215 aaPredicted RBP12.58□□□□□ -0.4
USHBP1-203ENST00000431146 Q0VG73 95 aa12.58□□□□□ -0.4
USHBP1-203ENST00000431146 PRR9Q5T870 116 aa12.58□□□□□ -0.4
USHBP1-203ENST00000431146 DCANP1Q8TF63 244 aa12.58□□□□□ -0.4
USHBP1-203ENST00000431146 VPS25Q9BRG1 176 aa12.58□□□□□ -0.4
USHBP1-203ENST00000431146 C11orf21Q9P2W6 132 aa12.58□□□□□ -0.4
USHBP1-203ENST00000431146 RNF151Q2KHN1 245 aa12.57□□□□□ -0.4
USHBP1-203ENST00000431146 OR10J6PQ8NGY7 276 aa12.57□□□□□ -0.4
USHBP1-203ENST00000431146 TMEM18Q96B42 140 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms