RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 LY6G5BQ8NDX9 201 aa9.08□□□□□ -0.96
PTCH1-208ENST00000430669 TRANK1O15050 2925 aa9.08□□□□□ -0.96
PTCH1-208ENST00000430669 TRBV6-1A0A0K0K1D8 114 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 GP9P14770 177 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 OR5A1Q8NGJ0 315 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 RBMY1BA6NDE4 496 aaKnown RBP9.07□□□□□ -0.96
PTCH1-208ENST00000430669 RBMY1EA6NEQ0 496 aaKnown RBP9.07□□□□□ -0.96
PTCH1-208ENST00000430669 RBMY1DP0C7P1 496 aaKnown RBP9.07□□□□□ -0.96
PTCH1-208ENST00000430669 RBMY1A1P0DJD3 496 aaKnown RBP9.07□□□□□ -0.96
PTCH1-208ENST00000430669 RBMY1CP0DJD4 496 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 CFAP161Q6P656 301 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 C14orf178Q8N769 122 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-208ENST00000430669 NCR2O95944 276 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 Q8N8P6 123 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 TRGV1A0A0A0MS02 117 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 APOC4P55056 127 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 SSBP2P81877 361 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-208ENST00000430669 IGHV4-39P01824 125 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 LGALS1P09382 135 aaKnown RBP9.07□□□□□ -0.96
PTCH1-208ENST00000430669 KLF5Q13887 457 aaPredicted RBP9.07□□□□□ -0.96
PTCH1-208ENST00000430669 VGLL1Q99990 258 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 TEX22C9J3V5 150 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 EMP1P54849 157 aa9.07□□□□□ -0.96
PTCH1-208ENST00000430669 WI2-2373I1.2A0A1W2PRP0 233 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 Q8N9W7 124 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 C20orf78Q9BR46 151 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 IGHV1OR15-1A0A075B7D0 117 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 K7EN84 100 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 TMEM158Q8WZ71 300 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 IGF2RP11717 2491 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 I3L3M4 83 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 ZNF876PQ49A33 203 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 ST6GALNAC6Q969X2 333 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 CGB3P0DN86 165 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 CGB7P0DN87 165 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 BOD1L2Q8IYS8 172 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 IGHV4-61A0A0C4DH41 118 aa9.06□□□□□ -0.96
PTCH1-208ENST00000430669 C3orf79P0CE67 100 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 ORAOV1Q8WV07 137 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 AGRNO00468 2067 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 IGHV4-30-2A0A087WSY4 118 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 ODF3BA8MYP8 253 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 PYY3Q5JQD4 70 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 RITA1Q96K30 269 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 A0A1B0GV90 55 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 SLAQ13239 276 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 MRPL51Q4U2R6 128 aaKnown RBP9.05□□□□□ -0.96
PTCH1-208ENST00000430669 SPXQ9BT56 116 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 SIRPDQ9H106 197 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 SPTBN4Q9H254 2564 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 CRPP02741 224 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 LINC00469Q8N7U9 141 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 FAM167A-AS1Q96KT0 104 aa9.05□□□□□ -0.96
PTCH1-208ENST00000430669 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-208ENST00000430669 IGKV3OR2-268A0A0C4DH90 116 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 DEFB131AP59861 70 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 MSMPQ1L6U9 139 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 KLF12Q9Y4X4 402 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 C11orf44Q8N8P7 122 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 A0A1B0GUS0 222 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 DEFB112Q30KQ8 113 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 UBE2E2Q96LR5 201 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 IGF2BP2-AS1Q96M15 143 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 A0A087X0K7 114 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 K7EMT4 169 aa9.04□□□□□ -0.96
PTCH1-208ENST00000430669 HOXD3P31249 432 aaPredicted RBP9.04□□□□□ -0.96
PTCH1-208ENST00000430669 TMEM86BQ8N661 226 aa9.03□□□□□ -0.96
PTCH1-208ENST00000430669 Q8N7P7 452 aa9.03□□□□□ -0.96
PTCH1-208ENST00000430669 IGKV1-17P01599 117 aa9.03□□□□□ -0.96
PTCH1-208ENST00000430669 C16orf54Q6UWD8 224 aa9.03□□□□□ -0.96
PTCH1-208ENST00000430669 LRRC75A-AS1Q8N1F1 130 aa9.03□□□□□ -0.96
PTCH1-208ENST00000430669 DEFB121Q5J5C9 76 aa9.03□□□□□ -0.96
PTCH1-208ENST00000430669 C20orf144Q9BQM9 153 aa9.03□□□□□ -0.96
PTCH1-208ENST00000430669 MEGF9Q9H1U4 602 aa9.03□□□□□ -0.96
PTCH1-208ENST00000430669 IGFL4Q6B9Z1 124 aa9.02□□□□□ -0.96
PTCH1-208ENST00000430669 HIVEP2P31629 2446 aa9.02□□□□□ -0.96
PTCH1-208ENST00000430669 M0R2P5 195 aa9.02□□□□□ -0.96
PTCH1-208ENST00000430669 BUB3O43684 328 aa9.02□□□□□ -0.96
PTCH1-208ENST00000430669 IGHG2P01859 326 aa9.02□□□□□ -0.96
PTCH1-208ENST00000430669 OVOL2Q9BRP0 275 aa9.02□□□□□ -0.96
PTCH1-208ENST00000430669 PLA2G5P39877 138 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 WFDC12Q8WWY7 111 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 ANKRD17O75179 2603 aaKnown RBP9.02□□□□□ -0.97
PTCH1-208ENST00000430669 IGHV1-24A0A0C4DH33 117 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 IGHV4-59P01825 116 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 SPINK13Q1W4C9 94 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 CTSGP08311 255 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 RPL35AP18077 110 aaKnown RBP9.02□□□□□ -0.97
PTCH1-208ENST00000430669 ZFP36P26651 326 aaKnown RBP9.02□□□□□ -0.97
PTCH1-208ENST00000430669 ZNF493Q6ZR52 646 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 GPHB5Q86YW7 130 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 CHCHD5Q9BSY4 110 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 IGHV4-38-2P0DP08 117 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 HTN3P15516 51 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 RASL10AQ92737 203 aa9.02□□□□□ -0.97
PTCH1-208ENST00000430669 NDUFS7O75251 213 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 LGALS9BQ3B8N2 356 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 LGALS9CQ6DKI2 356 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 SPCS1Q9Y6A9 102 aa9.01□□□□□ -0.97
PTCH1-208ENST00000430669 MTURNQ8N3F0 131 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms