RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 IGLC7A0M8Q6 106 aa13.28□□□□□ -0.28
RIF1-204ENST00000430328 IGHV1-46P01743 117 aa13.28□□□□□ -0.28
RIF1-204ENST00000430328 IGKV1-9A0A0C4DH69 117 aa13.28□□□□□ -0.28
RIF1-204ENST00000430328 Q9H8V8 135 aa13.28□□□□□ -0.28
RIF1-204ENST00000430328 IGKV1-39P01597 117 aa13.27□□□□□ -0.28
RIF1-204ENST00000430328 IGKV1D-39P04432 117 aa13.27□□□□□ -0.28
RIF1-204ENST00000430328 OBSL1O75147 1896 aa13.27□□□□□ -0.28
RIF1-204ENST00000430328 TNRC6CQ9HCJ0 1690 aaKnown RBP13.27□□□□□ -0.28
RIF1-204ENST00000430328 FOXF2Q12947 444 aa13.27□□□□□ -0.28
RIF1-204ENST00000430328 FOXI2Q6ZQN5 318 aa13.27□□□□□ -0.28
RIF1-204ENST00000430328 B4DSR2 109 aa13.27□□□□□ -0.28
RIF1-204ENST00000430328 IGLV3-21P80748 117 aaPredicted RBP13.27□□□□□ -0.28
RIF1-204ENST00000430328 SP7Q8TDD2 431 aaPredicted RBP13.27□□□□□ -0.28
RIF1-204ENST00000430328 PAX9P55771 341 aa13.27□□□□□ -0.29
RIF1-204ENST00000430328 JMJD7-PLA2G4BH0Y9G9 81 aa13.27□□□□□ -0.29
RIF1-204ENST00000430328 CRYGBP07316 175 aa13.27□□□□□ -0.29
RIF1-204ENST00000430328 ZNF672Q499Z4 452 aaPredicted RBP13.27□□□□□ -0.29
RIF1-204ENST00000430328 C9orf47Q6ZRZ4 202 aa13.27□□□□□ -0.29
RIF1-204ENST00000430328 C3orf22Q8N5N4 141 aa13.27□□□□□ -0.29
RIF1-204ENST00000430328 H0Y9J4 135 aa13.27□□□□□ -0.29
RIF1-204ENST00000430328 K7EMI3 77 aa13.27□□□□□ -0.29
RIF1-204ENST00000430328 NHSQ6T4R5 1651 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 IGHV1-18A0A0C4DH31 117 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 TRPM3Q9HCF6 1732 aaPredicted RBP13.26□□□□□ -0.29
RIF1-204ENST00000430328 C5orf67F2Z3F1 127 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 C20orf78Q9BR46 151 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 IGKV1D-8A0A087WSZ0 117 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 SMIM27A0A1W2PRY6 76 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 TRBV19A0A075B6N1 114 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 C15orf62A8K5M9 175 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 LHFPL1Q86WI0 220 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 SRRM5B3KS81 715 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 C4orf51C9J302 202 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 TIAF1O95411 115 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 TEN1Q86WV5 123 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 ICOSQ9Y6W8 199 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 SBF2Q86WG5 1849 aa13.26□□□□□ -0.29
RIF1-204ENST00000430328 RNASE13Q5GAN3 156 aaKnown RBP13.25□□□□□ -0.29
RIF1-204ENST00000430328 WIPF2Q8TF74 440 aaPredicted RBP13.25□□□□□ -0.29
RIF1-204ENST00000430328 C9JQL5 133 aa13.25□□□□□ -0.29
RIF1-204ENST00000430328 EFNA4P52798 201 aa13.25□□□□□ -0.29
RIF1-204ENST00000430328 PAQR4Q8N4S7 273 aaPredicted RBP13.25□□□□□ -0.29
RIF1-204ENST00000430328 PYGO2Q9BRQ0 406 aa13.25□□□□□ -0.29
RIF1-204ENST00000430328 TMEM178BH3BS89 294 aa13.25□□□□□ -0.29
RIF1-204ENST00000430328 LINC01620Q4KN68 170 aa13.25□□□□□ -0.29
RIF1-204ENST00000430328 SIGLEC1Q9BZZ2 1709 aa13.25□□□□□ -0.29
RIF1-204ENST00000430328 NDUFC2-KCTD14E9PQ53 114 aa13.24□□□□□ -0.29
RIF1-204ENST00000430328 CXCL5P42830 114 aa13.24□□□□□ -0.29
RIF1-204ENST00000430328 IGKV1OR2-108A0A075B7D4 117 aa13.24□□□□□ -0.29
RIF1-204ENST00000430328 NDUFS7O75251 213 aa13.24□□□□□ -0.29
RIF1-204ENST00000430328 TIRAPP58753 221 aa13.24□□□□□ -0.29
RIF1-204ENST00000430328 RHOHQ15669 191 aa13.24□□□□□ -0.29
RIF1-204ENST00000430328 ZMAT4Q9H898 229 aa13.24□□□□□ -0.29
RIF1-204ENST00000430328 TRAV4A0A0B4J268 109 aa13.24□□□□□ -0.29
RIF1-204ENST00000430328 OVOL3O00110 214 aa13.24□□□□□ -0.29
RIF1-204ENST00000430328 TRBV12-3P01733 135 aa13.23□□□□□ -0.29
RIF1-204ENST00000430328 ZNF134P52741 427 aa13.23□□□□□ -0.29
RIF1-204ENST00000430328 USP17L23D6RBM5 183 aa13.23□□□□□ -0.29
RIF1-204ENST00000430328 WFDC11Q8NEX6 87 aa13.23□□□□□ -0.29
RIF1-204ENST00000430328 FGFBP3Q8TAT2 258 aa13.23□□□□□ -0.29
RIF1-204ENST00000430328 ANKRD39Q53RE8 183 aa13.23□□□□□ -0.29
RIF1-204ENST00000430328 Q6ZVH6 145 aa13.23□□□□□ -0.29
RIF1-204ENST00000430328 DKK2Q9UBU2 259 aa13.23□□□□□ -0.29
RIF1-204ENST00000430328 TMEM256-PLSCR3K7ERE1 68 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 BRD3OSQ6XYD6 125 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 TMEM61Q8N0U2 210 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 E9PQ18 207 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 RALGAPA2Q2PPJ7 1873 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 HCFC1P51610 2035 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 IL15RAQ13261 267 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 MRPL36Q9P0J6 103 aaKnown RBP13.22□□□□□ -0.29
RIF1-204ENST00000430328 RLFQ13129 1914 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 SND1-IT1Q9HBX3 110 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 UBR3Q6ZT12 1888 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 LINC00114Q6XXX2 140 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 SEM1Q6ZVN7 128 aa13.22□□□□□ -0.29
RIF1-204ENST00000430328 IGHV4OR15-8A0A075B7B6 117 aa13.21□□□□□ -0.29
RIF1-204ENST00000430328 A0A087WW49 117 aa13.21□□□□□ -0.29
RIF1-204ENST00000430328 A0A096LPF7 62 aa13.21□□□□□ -0.29
RIF1-204ENST00000430328 C20orf204Q6ZNR8 217 aa13.21□□□□□ -0.29
RIF1-204ENST00000430328 C8orf86Q6ZUL3 223 aa13.21□□□□□ -0.29
RIF1-204ENST00000430328 LRP5O75197 1615 aa13.21□□□□□ -0.29
RIF1-204ENST00000430328 TAF1LQ8IZX4 1826 aa13.21□□□□□ -0.3
RIF1-204ENST00000430328 LINC01619G3V211 115 aa13.21□□□□□ -0.3
RIF1-204ENST00000430328 UBE2AP49459 152 aa13.21□□□□□ -0.3
RIF1-204ENST00000430328 PAPPAQ13219 1627 aa13.21□□□□□ -0.3
RIF1-204ENST00000430328 HIST2H2BCQ6DN03 193 aa13.2□□□□□ -0.3
RIF1-204ENST00000430328 MST1LQ2TV78 715 aa13.2□□□□□ -0.3
RIF1-204ENST00000430328 Q9HAA7 133 aa13.2□□□□□ -0.3
RIF1-204ENST00000430328 GATA4P43694 442 aa13.2□□□□□ -0.3
RIF1-204ENST00000430328 SPG11Q96JI7 2443 aa13.19□□□□□ -0.3
RIF1-204ENST00000430328 WIPF3A6NGB9 483 aa13.19□□□□□ -0.3
RIF1-204ENST00000430328 IGHV2-70DA0A0C4DH43 119 aa13.19□□□□□ -0.3
RIF1-204ENST00000430328 EML5Q05BV3 1969 aa13.19□□□□□ -0.3
RIF1-204ENST00000430328 LINC00473A8K010 186 aa13.19□□□□□ -0.3
RIF1-204ENST00000430328 Q6ZUT4 128 aa13.19□□□□□ -0.3
RIF1-204ENST00000430328 E9PLN8 166 aa13.19□□□□□ -0.3
RIF1-204ENST00000430328 CYYR1Q96J86 154 aa13.19□□□□□ -0.3
RIF1-204ENST00000430328 TRAV26-1A0A087WT03 109 aa13.19□□□□□ -0.3
RIF1-204ENST00000430328 KIR2DL5BA0A0G2JN68 375 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms