RNA–Protein interactions for RNA: ENST00000429578.5

LINC00887-203, long intergenic non-protein coding RNA 887, humanhuman

TSL 2 BASIC

Gene LINC00887, Length 1,717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00887-203ENST00000429578 TUBA4BQ9H853 241 aa12.53□□□□□ -0.4
LINC00887-203ENST00000429578 SDF2L1Q9HCN8 221 aa12.53□□□□□ -0.4
LINC00887-203ENST00000429578 GPX1P07203 203 aa12.52□□□□□ -0.41
LINC00887-203ENST00000429578 SMUG1Q53HV7 270 aa12.52□□□□□ -0.41
LINC00887-203ENST00000429578 LINC01551Q86U37 167 aa12.52□□□□□ -0.41
LINC00887-203ENST00000429578 ZC2HC1AQ96GY0 325 aa12.52□□□□□ -0.41
LINC00887-203ENST00000429578 AURKAIP1Q9NWT8 199 aaPredicted RBP12.52□□□□□ -0.41
LINC00887-203ENST00000429578 CARHSP1Q9Y2V2 147 aaKnown RBP12.52□□□□□ -0.41
LINC00887-203ENST00000429578 LOC102724200A0A096LPH7 203 aaPredicted RBP12.51□□□□□ -0.41
LINC00887-203ENST00000429578 A8MZ25 164 aa12.51□□□□□ -0.41
LINC00887-203ENST00000429578 MGST1P10620 155 aaKnown RBP12.51□□□□□ -0.41
LINC00887-203ENST00000429578 FXYD7P58549 80 aa12.51□□□□□ -0.41
LINC00887-203ENST00000429578 MORN3Q6PF18 240 aaPredicted RBP12.51□□□□□ -0.41
LINC00887-203ENST00000429578 J3KRW8 73 aa12.51□□□□□ -0.41
LINC00887-203ENST00000429578 K7EN84 100 aa12.51□□□□□ -0.41
LINC00887-203ENST00000429578 GCGP01275 180 aa12.51□□□□□ -0.41
LINC00887-203ENST00000429578 AMBPP02760 352 aa12.51□□□□□ -0.41
LINC00887-203ENST00000429578 RPL23P62829 140 aaKnown RBP12.51□□□□□ -0.41
LINC00887-203ENST00000429578 KIR3DS1Q14943 382 aa12.51□□□□□ -0.41
LINC00887-203ENST00000429578 PRR9Q5T870 116 aa12.51□□□□□ -0.41
LINC00887-203ENST00000429578 CRXO43186 299 aaPredicted RBP12.5□□□□□ -0.41
LINC00887-203ENST00000429578 ZNF80P51504 273 aaPredicted RBP12.5□□□□□ -0.41
LINC00887-203ENST00000429578 PNRC1Q12796 327 aaPredicted RBP12.5□□□□□ -0.41
LINC00887-203ENST00000429578 BIN3Q9NQY0 253 aa12.5□□□□□ -0.41
LINC00887-203ENST00000429578 TRAV12-2A0A075B6T6 113 aa12.49□□□□□ -0.41
LINC00887-203ENST00000429578 RNASE4P34096 147 aaKnown RBP12.49□□□□□ -0.41
LINC00887-203ENST00000429578 CRIP1P50238 77 aa12.49□□□□□ -0.41
LINC00887-203ENST00000429578 BTN1A1Q13410 526 aa12.49□□□□□ -0.41
LINC00887-203ENST00000429578 ADIRFQ15847 76 aa12.49□□□□□ -0.41
LINC00887-203ENST00000429578 GFI1BQ5VTD9 330 aa12.49□□□□□ -0.41
LINC00887-203ENST00000429578 PRR27Q6MZM9 219 aa12.49□□□□□ -0.41
LINC00887-203ENST00000429578 LINC00322Q6ZN03 302 aaPredicted RBP12.49□□□□□ -0.41
LINC00887-203ENST00000429578 CSTL1Q9H114 145 aa12.49□□□□□ -0.41
LINC00887-203ENST00000429578 KIR2DL5BA0A0G2JN68 375 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 KIR2DL5BA0A0G2JPC4 375 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 C7orf71A4D174 169 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 PFN1P07737 140 aaKnown RBP12.48□□□□□ -0.41
LINC00887-203ENST00000429578 GIG44P09565 113 aaPredicted RBP12.48□□□□□ -0.41
LINC00887-203ENST00000429578 OR5I1Q13606 314 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 Q6AWC8 147 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 KIR2DL5AQ8N109 375 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 KIR2DL5BQ8NHK3 375 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 MRAPQ8TCY5 172 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 C1QTNF4Q9BXJ3 329 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 XCL2Q9UBD3 114 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 APOC4P55056 127 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 FAM162BQ5T6X4 162 aa12.48□□□□□ -0.41
LINC00887-203ENST00000429578 FABP5P3A8MUU1 101 aa12.47□□□□□ -0.41
LINC00887-203ENST00000429578 K7EIL1 84 aa12.47□□□□□ -0.41
LINC00887-203ENST00000429578 APOC3P02656 99 aa12.47□□□□□ -0.41
LINC00887-203ENST00000429578 ISOC2Q96AB3 205 aa12.47□□□□□ -0.41
LINC00887-203ENST00000429578 TRAV12-3A0A0B4J271 114 aa12.46□□□□□ -0.41
LINC00887-203ENST00000429578 TRAV21A0A0B4J279 112 aa12.46□□□□□ -0.41
LINC00887-203ENST00000429578 CA1P00915 261 aaPredicted RBP12.46□□□□□ -0.41
LINC00887-203ENST00000429578 INSP01308 110 aa12.46□□□□□ -0.41
LINC00887-203ENST00000429578 C20orf144Q9BQM9 153 aa12.46□□□□□ -0.41
LINC00887-203ENST00000429578 C19orf71A6NCJ1 209 aa12.45□□□□□ -0.42
LINC00887-203ENST00000429578 SH2D1AO60880 128 aa12.45□□□□□ -0.42
LINC00887-203ENST00000429578 ZNF324O75467 553 aaPredicted RBP12.45□□□□□ -0.42
LINC00887-203ENST00000429578 Q6ZQT7 251 aa12.45□□□□□ -0.42
LINC00887-203ENST00000429578 ATP6V1G1O75348 118 aa12.45□□□□□ -0.42
LINC00887-203ENST00000429578 FRMD6-AS1P0C7T7 363 aa12.45□□□□□ -0.42
LINC00887-203ENST00000429578 IBA57Q5T440 356 aaKnown RBP12.45□□□□□ -0.42
LINC00887-203ENST00000429578 FAM231DQ6ZW35 169 aa12.45□□□□□ -0.42
LINC00887-203ENST00000429578 SVBPQ8N300 66 aa12.45□□□□□ -0.42
LINC00887-203ENST00000429578 CSNK1G2-AS1Q8NCQ2 148 aa12.45□□□□□ -0.42
LINC00887-203ENST00000429578 DAZAP1Q96EP5 407 aaKnown RBP12.45□□□□□ -0.42
LINC00887-203ENST00000429578 RNASE7Q9H1E1 156 aaKnown RBP12.45□□□□□ -0.42
LINC00887-203ENST00000429578 M0R036 132 aa12.44□□□□□ -0.42
LINC00887-203ENST00000429578 RBMY1A1P0DJD3 496 aaKnown RBP12.44□□□□□ -0.42
LINC00887-203ENST00000429578 RBMY1CP0DJD4 496 aa12.44□□□□□ -0.42
LINC00887-203ENST00000429578 ERVFC1-1P60608 527 aa12.44□□□□□ -0.42
LINC00887-203ENST00000429578 RBMY1FQ15415 496 aaKnown RBP12.44□□□□□ -0.42
LINC00887-203ENST00000429578 UBE2CO00762 179 aa12.43□□□□□ -0.42
LINC00887-203ENST00000429578 NUDT10Q8NFP7 164 aa12.43□□□□□ -0.42
LINC00887-203ENST00000429578 NUDT11Q96G61 164 aa12.43□□□□□ -0.42
LINC00887-203ENST00000429578 SFRP2Q96HF1 295 aa12.43□□□□□ -0.42
LINC00887-203ENST00000429578 OSTCQ9NRP0 149 aa12.43□□□□□ -0.42
LINC00887-203ENST00000429578 B4DEV8 164 aa12.42□□□□□ -0.42
LINC00887-203ENST00000429578 P01737 135 aa12.42□□□□□ -0.42
LINC00887-203ENST00000429578 CLRN3Q8NCR9 226 aa12.42□□□□□ -0.42
LINC00887-203ENST00000429578 SNAPINO95295 136 aa12.42□□□□□ -0.42
LINC00887-203ENST00000429578 C1orf158Q8N1D5 194 aa12.42□□□□□ -0.42
LINC00887-203ENST00000429578 TMEM256Q8N2U0 113 aa12.42□□□□□ -0.42
LINC00887-203ENST00000429578 C15orf54Q8N8G6 183 aa12.42□□□□□ -0.42
LINC00887-203ENST00000429578 C11orf21Q9P2W6 132 aa12.42□□□□□ -0.42
LINC00887-203ENST00000429578 H7BYZ3 331 aa12.41□□□□□ -0.42
LINC00887-203ENST00000429578 ORM1P02763 201 aa12.41□□□□□ -0.42
LINC00887-203ENST00000429578 DEFB121Q5J5C9 76 aa12.41□□□□□ -0.42
LINC00887-203ENST00000429578 OR10G8Q8NGN5 311 aa12.41□□□□□ -0.42
LINC00887-203ENST00000429578 GOLT1BQ9Y3E0 138 aa12.41□□□□□ -0.42
LINC00887-203ENST00000429578 IGKV3D-20A0A0C4DH25 116 aa12.4□□□□□ -0.42
LINC00887-203ENST00000429578 S100A1P23297 94 aa12.4□□□□□ -0.42
LINC00887-203ENST00000429578 TDRG1Q3Y452 100 aa12.4□□□□□ -0.42
LINC00887-203ENST00000429578 RNF212Q495C1 297 aa12.4□□□□□ -0.42
LINC00887-203ENST00000429578 LINC01559Q495D7 138 aa12.4□□□□□ -0.42
LINC00887-203ENST00000429578 MUC21Q5SSG8 566 aa12.4□□□□□ -0.42
LINC00887-203ENST00000429578 FAM159AQ6UWV7 190 aa12.4□□□□□ -0.42
LINC00887-203ENST00000429578 PYGO2Q9BRQ0 406 aa12.4□□□□□ -0.42
LINC00887-203ENST00000429578 TMEM208Q9BTX3 173 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms