RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 FHL1Q13642 323 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 MLANAQ16655 118 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 PKDREJQ9NTG1 2253 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 BUB3O43684 328 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 ATRAIDQ6UW56 229 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 TMEM14BQ9NUH8 114 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 NDUFB1O75438 58 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 EGR2P11161 476 aaPredicted RBP7.13□□□□□ -1.27
CTNND1-208ENST00000428599 XCL1P47992 114 aa7.13□□□□□ -1.27
CTNND1-208ENST00000428599 CLPSL1A2RUU4 121 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 FAM104BQ5XKR9 115 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 C5orf24Q7Z6I8 188 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 PIFOQ8TCI5 191 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 RSPO3Q9BXY4 272 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-208ENST00000428599 SPINK8P0C7L1 97 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 OR11H6Q8NGC7 330 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 MRPL53Q96EL3 112 aaKnown RBP7.12□□□□□ -1.27
CTNND1-208ENST00000428599 NDUFA4L2Q9NRX3 87 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 ABCA4P78363 2273 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 PLXND1Q9Y4D7 1925 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 WT1P19544 449 aaPredicted RBP7.12□□□□□ -1.27
CTNND1-208ENST00000428599 DEFB113Q30KQ7 82 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 Q6ZQT7 251 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 PCNX2A6NKB5 2137 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 SPART-AS1P0CW21 52 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 MPV17L2Q567V2 206 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 VOPP1Q96AW1 172 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 ZNF581Q9P0T4 197 aa7.12□□□□□ -1.27
CTNND1-208ENST00000428599 IGLV2-23P01705 113 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 LINC00205P59089 165 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 ZNF124Q15973 351 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 MRPL23Q16540 153 aaKnown RBP7.11□□□□□ -1.27
CTNND1-208ENST00000428599 NCOR1P1Q9H4R4 102 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 ZFHX2Q9C0A1 2572 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-208ENST00000428599 SPTAN1Q13813 2472 aaKnown RBP7.11□□□□□ -1.27
CTNND1-208ENST00000428599 GP9P14770 177 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 FUSP35637 526 aaKnown RBP eCLIP7.11□□□□□ -1.27
CTNND1-208ENST00000428599 ADAMTSL5Q6ZMM2 481 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 FAM215AQ9Y5M1 114 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 USF3Q68DE3 2245 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 MUC6Q6W4X9 2439 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 TRAV12-1A0A0B4J245 112 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 H3BRN7 92 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 MORN5Q5VZ52 161 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 TEX36Q5VZQ5 186 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 IL17DQ8TAD2 202 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 CFHR4Q92496 578 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 CAMK2N2Q96S95 79 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 DOCK7Q96N67 2140 aa7.11□□□□□ -1.27
CTNND1-208ENST00000428599 F8W735 103 aaPredicted RBP7.11□□□□□ -1.27
CTNND1-208ENST00000428599 ATP5G1P05496 136 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 UBE2AP49459 152 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 LINC00311Q8N616 119 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 TIMM17AQ99595 171 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 TM2D2Q9BX73 214 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 ZNRD1Q9P1U0 126 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 C2orf16Q68DN1 1984 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 KIAA2026Q5HYC2 2103 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 DEFB112Q30KQ8 113 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 ZNF524Q96C55 264 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 TRAV26-2A0A0B4J265 109 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 LOXP28300 417 aaPredicted RBP7.1□□□□□ -1.27
CTNND1-208ENST00000428599 Q6ZWC4 215 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 K7EM74 188 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 C16orf74Q96GX8 76 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 CYTL1Q9NRR1 136 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 MRPL36Q9P0J6 103 aaKnown RBP7.1□□□□□ -1.27
CTNND1-208ENST00000428599 TMEM14CQ9P0S9 112 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 U3KQE9 123 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 MPDZO75970 2070 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 PRR25Q96S07 402 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 PCNX1Q96RV3 2341 aa7.1□□□□□ -1.27
CTNND1-208ENST00000428599 HEATR5AQ86XA9 2040 aa7.09□□□□□ -1.27
CTNND1-208ENST00000428599 FAM120AOSQ5T036 256 aa7.09□□□□□ -1.27
CTNND1-208ENST00000428599 LINC00479Q96M42 142 aa7.09□□□□□ -1.27
CTNND1-208ENST00000428599 TTC28Q96AY4 2481 aa7.09□□□□□ -1.27
CTNND1-208ENST00000428599 QRFPP83859 136 aa7.09□□□□□ -1.27
CTNND1-208ENST00000428599 PYGO2Q9BRQ0 406 aa7.09□□□□□ -1.27
CTNND1-208ENST00000428599 FGF6P10767 208 aa7.09□□□□□ -1.27
CTNND1-208ENST00000428599 TINCRA0A1B0GVN0 87 aa7.09□□□□□ -1.27
CTNND1-208ENST00000428599 BVES-AS1Q5T3Y7 98 aa7.09□□□□□ -1.27
CTNND1-208ENST00000428599 ZNF503-AS2A6NEH8 195 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 MRPL51Q4U2R6 128 aaKnown RBP7.08□□□□□ -1.28
CTNND1-208ENST00000428599 GTSF1LQ9H1H1 148 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 TMEM258P61165 79 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 BOD1L2Q8IYS8 172 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 SLC25A29Q8N8R3 303 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 LTBP2Q14767 1821 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 IGHV4-59P01825 116 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 FOXE3Q13461 319 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 FANCD2OSQ96PS1 177 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 ORMDL1Q9P0S3 153 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 TRACP01848 142 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 C20orf78Q9BR46 151 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 IGHV3-30P01768 117 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 IGHV3-33P01772 117 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 IGHV3-30-3P0DP02 117 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 IGHV3-30-5P0DP03 117 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 Q6ZR03 302 aa7.08□□□□□ -1.28
CTNND1-208ENST00000428599 CARD19Q96LW7 228 aa7.08□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms