RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 TPSG1Q9NRR2 321 aa11.56□□□□□ -0.56
PTPRU-204ENST00000428026 GAGE12JA6NER3 117 aa11.56□□□□□ -0.56
PTPRU-204ENST00000428026 MMP23AO75900 390 aa11.56□□□□□ -0.56
PTPRU-204ENST00000428026 GAGE4Q13068 117 aa11.56□□□□□ -0.56
PTPRU-204ENST00000428026 GAGE5Q13069 117 aa11.56□□□□□ -0.56
PTPRU-204ENST00000428026 C1QTNF4Q9BXJ3 329 aa11.56□□□□□ -0.56
PTPRU-204ENST00000428026 NDUFS7O75251 213 aa11.56□□□□□ -0.56
PTPRU-204ENST00000428026 SAA4P35542 130 aa11.56□□□□□ -0.56
PTPRU-204ENST00000428026 DAZ1Q9NQZ3 744 aaKnown RBP11.56□□□□□ -0.56
PTPRU-204ENST00000428026 MAPK1IP1LQ8NDC0 245 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 E7EQL1 145 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 M0R1W7 72 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 ATP6V0E1O15342 81 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 C12orf74Q32Q52 190 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 WDR86Q86TI4 376 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 NUP210Q8TEM1 1887 aaPredicted RBP11.55□□□□□ -0.56
PTPRU-204ENST00000428026 B5MCH6 92 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 SUMO4Q6EEV6 95 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 PCP2Q8IVA1 136 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
PTPRU-204ENST00000428026 NDUFA12Q9UI09 145 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 FAM223BA6NKX1 122 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 WT1-ASQ06250 92 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 TDRG1Q3Y452 100 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 FAM223AQ8IWN6 122 aa11.55□□□□□ -0.56
PTPRU-204ENST00000428026 B4DSR2 109 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.54□□□□□ -0.56
PTPRU-204ENST00000428026 NUPR1O60356 82 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 USMG5Q96IX5 58 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 BPESC1Q9GZL8 116 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 PIEZO1Q92508 2521 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 NXPH4O95158 308 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 RNASE13Q5GAN3 156 aaKnown RBP11.54□□□□□ -0.56
PTPRU-204ENST00000428026 G3V318 75 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 I3L3M4 83 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 TRAV12-2A0A075B6T6 113 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 TEX36Q5VZQ5 186 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 CDKN1BP46527 198 aa11.54□□□□□ -0.56
PTPRU-204ENST00000428026 RBMY1FQ15415 496 aaKnown RBP11.54□□□□□ -0.56
PTPRU-204ENST00000428026 RNF223E7ERA6 249 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 F8VRH5 84 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 SH2D6Q7Z4S9 175 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 C15orf53Q8NAA6 179 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 XCL2Q9UBD3 114 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 TINCRA0A1B0GVN0 87 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 TRACP01848 142 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 RUSC1-AS1Q66K80 236 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 FXYD5Q96DB9 178 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 LMO1P25800 156 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 KLHL30-AS1Q8NEE0 82 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 KIR2DL5BA0A0G2JN68 375 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 KIR2DL5BA0A0G2JPC4 375 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 C17orf58Q2M2W7 97 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 Q6ZR03 302 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 ZGRF1Q86YA3 2104 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 KIR2DL5AQ8N109 375 aa11.53□□□□□ -0.56
PTPRU-204ENST00000428026 C8orf86Q6ZUL3 223 aa11.52□□□□□ -0.56
PTPRU-204ENST00000428026 C11orf52Q96A22 123 aa11.52□□□□□ -0.56
PTPRU-204ENST00000428026 ZNF503-AS2A6NEH8 195 aa11.52□□□□□ -0.56
PTPRU-204ENST00000428026 ZNF134P52741 427 aa11.52□□□□□ -0.56
PTPRU-204ENST00000428026 ACACBO00763 2458 aa11.52□□□□□ -0.57
PTPRU-204ENST00000428026 SMIM2Q9BVW6 85 aa11.52□□□□□ -0.57
PTPRU-204ENST00000428026 TMEM126AQ9H061 195 aa11.52□□□□□ -0.57
PTPRU-204ENST00000428026 IL15RAQ13261 267 aa11.52□□□□□ -0.57
PTPRU-204ENST00000428026 FAM120AOSQ5T036 256 aa11.52□□□□□ -0.57
PTPRU-204ENST00000428026 CACNA1AO00555 2505 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 J3QQQ9 107 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 K7EMI3 77 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 CRYBA4P53673 196 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 DIAPH2-AS1Q14236 149 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 ZNF747Q9BV97 191 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.51□□□□□ -0.572e-6■■■□□ 19.2
PTPRU-204ENST00000428026 DEFB121Q5J5C9 76 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 ZNF833PQ6ZTB9 187 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 C17orf77Q96MU5 243 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 UBL5Q9BZL1 73 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 MED13LQ71F56 2210 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 TEX48A0A1B0GUV7 120 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 H3BRN7 92 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 GAGE7O76087 117 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 GAGE12FP0CL80 117 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 GAGE12GP0CL81 117 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 GAGE12IP0CL82 117 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 FAM215AQ9Y5M1 114 aa11.51□□□□□ -0.57
PTPRU-204ENST00000428026 LYPD6BQ8NI32 183 aa11.5□□□□□ -0.57
PTPRU-204ENST00000428026 RNASE8Q8TDE3 154 aaKnown RBP11.5□□□□□ -0.57
PTPRU-204ENST00000428026 RSPO1Q2MKA7 263 aaPredicted RBP11.5□□□□□ -0.57
PTPRU-204ENST00000428026 UTF1Q5T230 341 aa11.5□□□□□ -0.57
PTPRU-204ENST00000428026 LINC00173Q6ZV60 143 aa11.5□□□□□ -0.57
PTPRU-204ENST00000428026 KIF26AQ9ULI4 1882 aaPredicted RBP11.5□□□□□ -0.57
PTPRU-204ENST00000428026 HELZP42694 1942 aaKnown RBP11.5□□□□□ -0.57
PTPRU-204ENST00000428026 C2orf16Q68DN1 1984 aa11.5□□□□□ -0.57
PTPRU-204ENST00000428026 GOLGB1Q14789 3259 aaKnown RBP11.5□□□□□ -0.57
PTPRU-204ENST00000428026 DEFB125Q8N687 156 aa11.5□□□□□ -0.57
PTPRU-204ENST00000428026 TAL2Q16559 108 aa11.49□□□□□ -0.57
PTPRU-204ENST00000428026 ANKRD29Q8N6D5 301 aa11.49□□□□□ -0.57
PTPRU-204ENST00000428026 ZNRF2Q8NHG8 242 aa11.49□□□□□ -0.57
PTPRU-204ENST00000428026 FAM110DQ8TAY7 271 aaPredicted RBP11.49□□□□□ -0.57
PTPRU-204ENST00000428026 SPRY2O43597 315 aa11.49□□□□□ -0.57
PTPRU-204ENST00000428026 SIVA1O15304 175 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms