RNA–Protein interactions for RNA: ENST00000427497.3

AC055811.2-201, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene AC055811.2, Length 1,693 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055811.2-201ENST00000427497 RAB5BP61020 215 aa13.44□□□□□ -0.26
AC055811.2-201ENST00000427497 NEU1Q99519 415 aa13.44□□□□□ -0.26
AC055811.2-201ENST00000427497 GFRA4Q9GZZ7 299 aa13.44□□□□□ -0.26
AC055811.2-201ENST00000427497 TRAV2A0A0B4J234 112 aa13.43□□□□□ -0.26
AC055811.2-201ENST00000427497 FAM231BA6NCW3 169 aa13.43□□□□□ -0.26
AC055811.2-201ENST00000427497 IZUMO1RA6ND01 250 aa13.43□□□□□ -0.26
AC055811.2-201ENST00000427497 TRGC2P03986 189 aa13.43□□□□□ -0.26
AC055811.2-201ENST00000427497 TFPI2P48307 235 aa13.43□□□□□ -0.26
AC055811.2-201ENST00000427497 DEFB1P60022 68 aa13.43□□□□□ -0.26
AC055811.2-201ENST00000427497 NDUFA11Q86Y39 141 aa13.43□□□□□ -0.26
AC055811.2-201ENST00000427497 OR2D3Q8NGH3 330 aa13.43□□□□□ -0.26
AC055811.2-201ENST00000427497 NAT8BQ9UHF3 227 aa13.43□□□□□ -0.26
AC055811.2-201ENST00000427497 SNRPD3P62318 126 aaKnown RBP13.42□□□□□ -0.26
AC055811.2-201ENST00000427497 PAFAH1B2P68402 229 aa13.42□□□□□ -0.26
AC055811.2-201ENST00000427497 DEFB114Q30KQ6 69 aa13.42□□□□□ -0.26
AC055811.2-201ENST00000427497 ZFP82Q8N141 532 aa13.42□□□□□ -0.26
AC055811.2-201ENST00000427497 NUP35Q8NFH5 326 aa13.42□□□□□ -0.26
AC055811.2-201ENST00000427497 SIGLEC8Q9NYZ4 499 aa13.42□□□□□ -0.26
AC055811.2-201ENST00000427497 F6UB75 175 aa13.41□□□□□ -0.26
AC055811.2-201ENST00000427497 GTSF1Q8WW33 167 aa13.41□□□□□ -0.26
AC055811.2-201ENST00000427497 FAM19A4Q96LR4 140 aa13.41□□□□□ -0.26
AC055811.2-201ENST00000427497 TRBV7-9A0A0J9YWB2 115 aa13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 HIGD1CA8MV81 97 aa13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 ZNF688P0C7X2 276 aa13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 HIST1H1AQ02539 215 aaPredicted RBP13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 TMEM61Q8N0U2 210 aa13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 DYNLRB2Q8TF09 96 aa13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 FABP5P3A8MUU1 101 aa13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 FOXA3P55318 350 aaPredicted RBP13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 RPL19P84098 196 aaKnown RBP13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 NSUN5P1Q3KNT7 163 aa13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 PSMG4Q5JS54 123 aa13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 ACTL10Q5JWF8 245 aa13.4□□□□□ -0.26
AC055811.2-201ENST00000427497 FRMD6-AS1P0C7T7 363 aa13.39□□□□□ -0.27
AC055811.2-201ENST00000427497 RBPMS2Q6ZRY4 209 aaKnown RBP13.39□□□□□ -0.27
AC055811.2-201ENST00000427497 ZFAND2AQ8N6M9 145 aa13.39□□□□□ -0.27
AC055811.2-201ENST00000427497 TGP01266 2768 aa13.39□□□□□ -0.27
AC055811.2-201ENST00000427497 GZMBP10144 247 aa13.38□□□□□ -0.27
AC055811.2-201ENST00000427497 FRZBQ92765 325 aa13.38□□□□□ -0.27
AC055811.2-201ENST00000427497 TRAV25A0A0B4J276 109 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 LOC105371267A0A1B0GV96 52 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 TMEM189A5PLL7 270 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 SPINK4O60575 86 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 CD300EQ496F6 205 aaPredicted RBP13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 COX19Q49B96 90 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 GDF5OSQ5U4N7 250 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 RASL11AQ6T310 242 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 APRG1Q8IVJ8 170 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 GNB1LQ9BYB4 327 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 A0A0J9YX75 114 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 CRISP2P16562 243 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 PRR9Q5T870 116 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 MRPL54Q6P161 138 aaKnown RBP13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 ATP5L2Q7Z4Y8 100 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 ZNF575Q86XF7 245 aa13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 SAV1Q9H4B6 383 aaPredicted RBP13.37□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST1H2BKO60814 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST1H2BJP06899 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST1H2BOP23527 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST1H2BBP33778 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST1H2BDP58876 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 RPS20P60866 119 aaKnown RBP13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST1H2BCP62807 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST2H2BEQ16778 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 LINC01559Q495D7 138 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST1H2BHQ93079 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST1H2BNQ99877 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 HIST1H2BMQ99879 126 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 SPAG8Q99932 426 aaPredicted RBP13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 TRAPPC1Q9Y5R8 145 aa13.36□□□□□ -0.27
AC055811.2-201ENST00000427497 A0A1B0GXF2 115 aa13.35□□□□□ -0.27
AC055811.2-201ENST00000427497 XKRY2A2RUG3 117 aa13.35□□□□□ -0.27
AC055811.2-201ENST00000427497 TRGC1P0CF51 173 aa13.35□□□□□ -0.27
AC055811.2-201ENST00000427497 FABP9Q0Z7S8 132 aa13.35□□□□□ -0.27
AC055811.2-201ENST00000427497 Q6AWC8 147 aa13.35□□□□□ -0.27
AC055811.2-201ENST00000427497 WDR73Q6P4I2 378 aa13.35□□□□□ -0.27
AC055811.2-201ENST00000427497 TMEM136Q6ZRR5 245 aa13.35□□□□□ -0.27
AC055811.2-201ENST00000427497 PGLYRP4Q96LB8 373 aa13.35□□□□□ -0.27
AC055811.2-201ENST00000427497 ODF3Q96PU9 254 aa13.35□□□□□ -0.27
AC055811.2-201ENST00000427497 FOXI2Q6ZQN5 318 aa13.34□□□□□ -0.27
AC055811.2-201ENST00000427497 C11orf21Q9P2W6 132 aa13.34□□□□□ -0.27
AC055811.2-201ENST00000427497 ZNF256Q9Y2P7 627 aaPredicted RBP13.34□□□□□ -0.27
AC055811.2-201ENST00000427497 MT-ND6P03923 174 aa13.34□□□□□ -0.27
AC055811.2-201ENST00000427497 EBLN2Q6P2I7 272 aa13.34□□□□□ -0.27
AC055811.2-201ENST00000427497 PRKDCP78527 4128 aaKnown RBP13.33□□□□□ -0.28
AC055811.2-201ENST00000427497 TMSB15BA0A087X1C1 80 aa13.33□□□□□ -0.28
AC055811.2-201ENST00000427497 OR4C46A6NHA9 309 aa13.33□□□□□ -0.28
AC055811.2-201ENST00000427497 SNURFLB1AK76 121 aa13.33□□□□□ -0.28
AC055811.2-201ENST00000427497 KLLNB2CW77 178 aa13.33□□□□□ -0.28
AC055811.2-201ENST00000427497 ORM1P02763 201 aa13.33□□□□□ -0.28
AC055811.2-201ENST00000427497 CD33P20138 364 aa13.33□□□□□ -0.28
AC055811.2-201ENST00000427497 IGKV3D-20A0A0C4DH25 116 aa13.32□□□□□ -0.28
AC055811.2-201ENST00000427497 DUSP14O95147 198 aaKnown RBP13.32□□□□□ -0.28
AC055811.2-201ENST00000427497 HLA-DQA1P01909 254 aa13.32□□□□□ -0.28
AC055811.2-201ENST00000427497 IGLC6P0CF74 106 aa13.32□□□□□ -0.28
AC055811.2-201ENST00000427497 DEFB131AP59861 70 aa13.32□□□□□ -0.28
AC055811.2-201ENST00000427497 MRPL18Q9H0U6 180 aaKnown RBP13.32□□□□□ -0.28
AC055811.2-201ENST00000427497 GPX1P07203 203 aa13.31□□□□□ -0.28
AC055811.2-201ENST00000427497 Q6ZQT7 251 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms