RNA–Protein interactions for RNA: ENST00000427123.5

SNX17-202, Transcript of sorting nexin 17, humanhuman

TSL 2

Gene SNX17, Length 2,007 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-202ENST00000427123 RNF185Q96GF1 192 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 TIMM8BQ9Y5J9 83 aaPredicted RBP14.66□□□□□ -0.06
SNX17-202ENST00000427123 SVEP1Q4LDE5 3571 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 A0A096LNT2 108 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 OVOL1O14753 267 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 TSPOP30536 169 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 FAM106AQ4KMX7 169 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 LINC01545Q5VT33 79 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 LAMTOR2Q9Y2Q5 125 aa14.66□□□□□ -0.06
SNX17-202ENST00000427123 MRPS16Q9Y3D3 137 aaKnown RBP14.66□□□□□ -0.06
SNX17-202ENST00000427123 SMKR1H3BMG3 65 aa14.65□□□□□ -0.06
SNX17-202ENST00000427123 TCAPO15273 167 aa14.65□□□□□ -0.06
SNX17-202ENST00000427123 PRB1P04280 392 aa14.65□□□□□ -0.06
SNX17-202ENST00000427123 BATFQ16520 125 aa14.65□□□□□ -0.06
SNX17-202ENST00000427123 A0A096LNJ9 63 aa14.65□□□□□ -0.06
SNX17-202ENST00000427123 NCR2O95944 276 aa14.65□□□□□ -0.06
SNX17-202ENST00000427123 LOXL1Q08397 574 aaPredicted RBP14.65□□□□□ -0.06
SNX17-202ENST00000427123 FOXE3Q13461 319 aa14.65□□□□□ -0.06
SNX17-202ENST00000427123 LINC00477Q96M19 166 aa14.65□□□□□ -0.06
SNX17-202ENST00000427123 IGHV7-4-1A0A0J9YVY3 117 aa14.64□□□□□ -0.07
SNX17-202ENST00000427123 HSBP1L1C9JCN9 74 aa14.64□□□□□ -0.07
SNX17-202ENST00000427123 DEFB112Q30KQ8 113 aa14.64□□□□□ -0.07
SNX17-202ENST00000427123 LCNL1Q6ZST4 164 aa14.64□□□□□ -0.07
SNX17-202ENST00000427123 OR10J6PQ8NGY7 276 aa14.64□□□□□ -0.07
SNX17-202ENST00000427123 H0Y8G0 127 aa14.63□□□□□ -0.07
SNX17-202ENST00000427123 TCF21O43680 179 aa14.63□□□□□ -0.07
SNX17-202ENST00000427123 PRSS57Q6UWY2 283 aa14.63□□□□□ -0.07
SNX17-202ENST00000427123 MAP1LC3AQ9H492 121 aa14.63□□□□□ -0.07
SNX17-202ENST00000427123 DAZ1Q9NQZ3 744 aaKnown RBP14.63□□□□□ -0.07
SNX17-202ENST00000427123 USP9XQ93008 2570 aaPredicted RBP14.63□□□□□ -0.07
SNX17-202ENST00000427123 hDV102S1A0JD36 115 aa14.63□□□□□ -0.07
SNX17-202ENST00000427123 IGHV4-59P01825 116 aa14.63□□□□□ -0.07
SNX17-202ENST00000427123 HBDP02042 147 aa14.63□□□□□ -0.07
SNX17-202ENST00000427123 COL5A1-AS1Q5SY13 56 aa14.63□□□□□ -0.07
SNX17-202ENST00000427123 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.63□□□□□ -0.073e-8■■■■□ 26.1
SNX17-202ENST00000427123 COL12A1Q99715 3063 aa14.62□□□□□ -0.07
SNX17-202ENST00000427123 RHPN1-AS1Q9BWJ2 59 aa14.62□□□□□ -0.07
SNX17-202ENST00000427123 PEF1Q9UBV8 284 aaKnown RBP14.62□□□□□ -0.07
SNX17-202ENST00000427123 PRR9Q5T870 116 aa14.61□□□□□ -0.07
SNX17-202ENST00000427123 SNAI2O43623 268 aa14.61□□□□□ -0.07
SNX17-202ENST00000427123 RPL11P62913 178 aaKnown RBP14.61□□□□□ -0.07
SNX17-202ENST00000427123 CACNG7P62955 275 aa14.61□□□□□ -0.07
SNX17-202ENST00000427123 TMEM95Q3KNT9 176 aa14.61□□□□□ -0.07
SNX17-202ENST00000427123 SMIM15Q7Z3B0 74 aa14.61□□□□□ -0.07
SNX17-202ENST00000427123 IGHV4-4A0A075B6R2 117 aa14.6□□□□□ -0.07
SNX17-202ENST00000427123 LINC01546A6NGU7 62 aa14.6□□□□□ -0.07
SNX17-202ENST00000427123 K7EMT4 169 aa14.6□□□□□ -0.07
SNX17-202ENST00000427123 PSMB8P28062 276 aa14.6□□□□□ -0.07
SNX17-202ENST00000427123 TM4SF20Q53R12 229 aa14.6□□□□□ -0.07
SNX17-202ENST00000427123 ZFAND2AQ8N6M9 145 aa14.6□□□□□ -0.07
SNX17-202ENST00000427123 BBC3Q96PG8 261 aaPredicted RBP14.6□□□□□ -0.07
SNX17-202ENST00000427123 MCRIP2Q9BUT9 160 aaKnown RBP14.6□□□□□ -0.07
SNX17-202ENST00000427123 MS4A6AQ9H2W1 248 aa14.6□□□□□ -0.07
SNX17-202ENST00000427123 TMEM89A2RUT3 159 aa14.59□□□□□ -0.07
SNX17-202ENST00000427123 OR8A1Q8NGG7 326 aa14.59□□□□□ -0.07
SNX17-202ENST00000427123 SMPXQ9UHP9 88 aa14.59□□□□□ -0.07
SNX17-202ENST00000427123 FLNCQ14315 2725 aa14.59□□□□□ -0.07
SNX17-202ENST00000427123 TNFRSF6BO95407 300 aa14.59□□□□□ -0.07
SNX17-202ENST00000427123 TGFAP01135 160 aa14.59□□□□□ -0.07
SNX17-202ENST00000427123 NXT2Q9NPJ8 142 aaKnown RBP14.59□□□□□ -0.07
SNX17-202ENST00000427123 ACACBO00763 2458 aa14.59□□□□□ -0.07
SNX17-202ENST00000427123 TRAV21A0A0B4J279 112 aa14.58□□□□□ -0.08
SNX17-202ENST00000427123 Q6ZQT7 251 aa14.58□□□□□ -0.08
SNX17-202ENST00000427123 FAM19A4Q96LR4 140 aa14.58□□□□□ -0.08
SNX17-202ENST00000427123 TRBV7-9A0A0J9YWB2 115 aa14.58□□□□□ -0.08
SNX17-202ENST00000427123 PMCHL2Q9BQD1 86 aa14.58□□□□□ -0.08
SNX17-202ENST00000427123 VPS13CQ709C8 3753 aa14.57□□□□□ -0.08
SNX17-202ENST00000427123 SPANXN1Q5VSR9 72 aa14.57□□□□□ -0.08
SNX17-202ENST00000427123 SAMD13Q5VXD3 122 aa14.57□□□□□ -0.08
SNX17-202ENST00000427123 ZNF843Q8N446 348 aa14.57□□□□□ -0.08
SNX17-202ENST00000427123 SCRT2Q9NQ03 307 aa14.57□□□□□ -0.08
SNX17-202ENST00000427123 SPG11Q96JI7 2443 aa14.57□□□□□ -0.08
SNX17-202ENST00000427123 H3BVH4 76 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 GAS8-AS1O95177 125 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 EVI2AP22794 236 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 SRSF1Q07955 248 aaKnown RBP eCLIP14.56□□□□□ -0.08
SNX17-202ENST00000427123 LGALS9BQ3B8N2 356 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 LGALS9CQ6DKI2 356 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 SLC25A34Q6PIV7 304 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 UFC1Q9Y3C8 167 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 ZFHX3Q15911 3703 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 A1L4Q6 167 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 APRG1Q8IVJ8 170 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 STPG4Q8N801 248 aa14.56□□□□□ -0.08
SNX17-202ENST00000427123 FSHBP01225 129 aa14.55□□□□□ -0.08
SNX17-202ENST00000427123 MAPK1IP1LQ8NDC0 245 aa14.55□□□□□ -0.08
SNX17-202ENST00000427123 IFI27L1Q96BM0 104 aa14.55□□□□□ -0.08
SNX17-202ENST00000427123 GOLT1BQ9Y3E0 138 aa14.55□□□□□ -0.08
SNX17-202ENST00000427123 IGKV3-7A0A075B6H7 116 aa14.54□□□□□ -0.08
SNX17-202ENST00000427123 J3KRW8 73 aa14.54□□□□□ -0.08
SNX17-202ENST00000427123 FXYD7P58549 80 aa14.54□□□□□ -0.08
SNX17-202ENST00000427123 OR2K2Q8NGT1 345 aa14.54□□□□□ -0.08
SNX17-202ENST00000427123 VPREB3Q9UKI3 123 aa14.54□□□□□ -0.08
SNX17-202ENST00000427123 CELSR1Q9NYQ6 3014 aa14.54□□□□□ -0.08
SNX17-202ENST00000427123 RNF223E7ERA6 249 aa14.54□□□□□ -0.08
SNX17-202ENST00000427123 ZNF25P17030 456 aaPredicted RBP14.54□□□□□ -0.08
SNX17-202ENST00000427123 G0S2P27469 103 aa14.54□□□□□ -0.08
SNX17-202ENST00000427123 ID1P41134 155 aa14.54□□□□□ -0.08
SNX17-202ENST00000427123 HINT1P49773 126 aaPredicted RBP14.54□□□□□ -0.08
SNX17-202ENST00000427123 DEFB1P60022 68 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms