RNA–Protein interactions for RNA: ENST00000427118.1

AFF3-208, Transcript of AF4/FMR2 family member 3, humanhuman

TSL 4

Gene AFF3, Length 528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFF3-208ENST00000427118 C5orf52A6NGY3 159 aa12.04□□□□□ -0.48
AFF3-208ENST00000427118 CBLN1P23435 193 aa12.04□□□□□ -0.48
AFF3-208ENST00000427118 TM4SF20Q53R12 229 aa12.04□□□□□ -0.48
AFF3-208ENST00000427118 GNB1LQ9BYB4 327 aa12.04□□□□□ -0.48
AFF3-208ENST00000427118 HUWE1Q7Z6Z7 4374 aaKnown RBP12.04□□□□□ -0.48
AFF3-208ENST00000427118 NPIPB6E9PJ23 425 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 TRGC1P0CF51 173 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 ID1P41134 155 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 SNRPEP62304 92 aaKnown RBP12.03□□□□□ -0.48
AFF3-208ENST00000427118 ADAMTSL5Q6ZMM2 481 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 ATP5L2Q7Z4Y8 100 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 OR2K2Q8NGT1 345 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 DYNLRB2Q8TF09 96 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 FRZBQ92765 325 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 ASCL2Q99929 193 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 NRN1Q9NPD7 142 aa12.03□□□□□ -0.48
AFF3-208ENST00000427118 IGKV2-40A0A087WW87 121 aaPredicted RBP12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H2BKO60814 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 IGKV2D-40P01614 121 aaPredicted RBP12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H2BJP06899 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H2BOP23527 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H2BBP33778 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H2BDP58876 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H2BCP62807 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST2H2BEQ16778 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.02□□□□□ -0.49
AFF3-208ENST00000427118 Q6AWC8 147 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H2BHQ93079 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H2BNQ99877 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H2BMQ99879 126 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 PPP1R14DQ9NXH3 145 aa12.02□□□□□ -0.49
AFF3-208ENST00000427118 UBE2CO00762 179 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 HLA-DQA1P01909 254 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 EDN2P20800 178 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 NDUFA6P56556 154 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 RPS20P60866 119 aaKnown RBP12.01□□□□□ -0.49
AFF3-208ENST00000427118 RPL11P62913 178 aaKnown RBP12.01□□□□□ -0.49
AFF3-208ENST00000427118 FABP9Q0Z7S8 132 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 DEFB114Q30KQ6 69 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 SMUG1Q53HV7 270 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 FAM162BQ5T6X4 162 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 TMEM78Q5T7P6 136 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 OR2D3Q8NGH3 330 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 ZC2HC1AQ96GY0 325 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 LENEPQ9Y5L5 61 aa12.01□□□□□ -0.49
AFF3-208ENST00000427118 TRAV8-2A0A0B4J237 113 aa12□□□□□ -0.49
AFF3-208ENST00000427118 PHOX2AO14813 284 aa12□□□□□ -0.49
AFF3-208ENST00000427118 TCL1AP56279 114 aa12□□□□□ -0.49
AFF3-208ENST00000427118 NEU1Q99519 415 aa12□□□□□ -0.49
AFF3-208ENST00000427118 ZNF705FA8MVS1 300 aaPredicted RBP11.99□□□□□ -0.49
AFF3-208ENST00000427118 S100A8P05109 93 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 HOXA5P20719 270 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 ZNF138P52744 262 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 CD300EQ496F6 205 aaPredicted RBP11.99□□□□□ -0.49
AFF3-208ENST00000427118 IGFL4Q6B9Z1 124 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 RBPMS2Q6ZRY4 209 aaKnown RBP11.99□□□□□ -0.49
AFF3-208ENST00000427118 C9orf47Q6ZRZ4 202 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 TCF24Q7RTU0 167 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 ZNF738Q8NE65 137 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 NUP35Q8NFH5 326 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 OR10J6PQ8NGY7 276 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 LINC00477Q96M19 166 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 VGLL1Q99990 258 aa11.99□□□□□ -0.49
AFF3-208ENST00000427118 A0A1B0GW15 77 aa11.98□□□□□ -0.49
AFF3-208ENST00000427118 HIGD1CA8MV81 97 aa11.98□□□□□ -0.49
AFF3-208ENST00000427118 SNURFLB1AK76 121 aa11.98□□□□□ -0.49
AFF3-208ENST00000427118 HLA-DMBP28068 263 aa11.98□□□□□ -0.49
AFF3-208ENST00000427118 FOXA3P55318 350 aaPredicted RBP11.98□□□□□ -0.49
AFF3-208ENST00000427118 LINC00322Q6ZN03 302 aaPredicted RBP11.98□□□□□ -0.49
AFF3-208ENST00000427118 RNF182Q8N6D2 247 aa11.98□□□□□ -0.49
AFF3-208ENST00000427118 BORCS7Q96B45 105 aa11.98□□□□□ -0.49
AFF3-208ENST00000427118 MRPL18Q9H0U6 180 aaKnown RBP11.98□□□□□ -0.49
AFF3-208ENST00000427118 SELENOKQ9Y6D0 94 aa11.98□□□□□ -0.49
AFF3-208ENST00000427118 TRAV25A0A0B4J276 109 aa11.97□□□□□ -0.49
AFF3-208ENST00000427118 TMEM189A5PLL7 270 aa11.97□□□□□ -0.49
AFF3-208ENST00000427118 FABP5P3A8MUU1 101 aa11.97□□□□□ -0.49
AFF3-208ENST00000427118 SOCS3O14543 225 aa11.97□□□□□ -0.49
AFF3-208ENST00000427118 CA1P00915 261 aaPredicted RBP11.97□□□□□ -0.49
AFF3-208ENST00000427118 RAB4BP61018 213 aa11.97□□□□□ -0.49
AFF3-208ENST00000427118 Q8N1Y9 231 aa11.97□□□□□ -0.49
AFF3-208ENST00000427118 C8orf49Q96NF6 230 aa11.97□□□□□ -0.49
AFF3-208ENST00000427118 TENM3Q9P273 2699 aa11.96□□□□□ -0.49
AFF3-208ENST00000427118 STAB2Q8WWQ8 2551 aa11.96□□□□□ -0.49
AFF3-208ENST00000427118 TRBV7-9A0A0J9YWB2 115 aa11.96□□□□□ -0.49
AFF3-208ENST00000427118 SH2D1AO60880 128 aa11.96□□□□□ -0.49
AFF3-208ENST00000427118 AKR1D1P51857 326 aa11.96□□□□□ -0.49
AFF3-208ENST00000427118 PAFAH1B2P68402 229 aa11.96□□□□□ -0.49
AFF3-208ENST00000427118 HIST1H1AQ02539 215 aaPredicted RBP11.96□□□□□ -0.49
AFF3-208ENST00000427118 COA6Q5JTJ3 125 aaKnown RBP11.96□□□□□ -0.49
AFF3-208ENST00000427118 MRPL54Q6P161 138 aaKnown RBP11.96□□□□□ -0.49
AFF3-208ENST00000427118 SBSPONQ8IVN8 264 aa11.96□□□□□ -0.49
AFF3-208ENST00000427118 AGPAT4-IT1Q9H0P7 198 aa11.96□□□□□ -0.49
AFF3-208ENST00000427118 PRAC2D3DTV9 90 aa11.95□□□□□ -0.5
AFF3-208ENST00000427118 FRMD6-AS1P0C7T7 363 aa11.95□□□□□ -0.5
AFF3-208ENST00000427118 HBBP68871 147 aa11.95□□□□□ -0.5
AFF3-208ENST00000427118 RIGQ13278 110 aa11.95□□□□□ -0.5
AFF3-208ENST00000427118 TMEM136Q6ZRR5 245 aa11.95□□□□□ -0.5
AFF3-208ENST00000427118 SPINK4O60575 86 aa11.94□□□□□ -0.5
AFF3-208ENST00000427118 APCSP02743 223 aa11.94□□□□□ -0.5
AFF3-208ENST00000427118 S100A2P29034 98 aa11.94□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms