RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ST20Q9HBF5 79 aa10.42□□□□□ -0.74
USP42-203ENST00000426246 GAGE12BA1L429 117 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 H3BRN7 92 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 IGF1P05019 195 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 SAA4P35542 130 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 FANCD2OSQ96PS1 177 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 KLF12Q9Y4X4 402 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 GOSR1O95249 250 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 HIST1H1AQ02539 215 aaPredicted RBP10.41□□□□□ -0.74
USP42-203ENST00000426246 MAP1LC3AQ9H492 121 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 TRGV3P03979 118 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 HIST2H2BDQ6DRA6 164 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 TMEM158Q8WZ71 300 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 DOPEY1Q5JWR5 2465 aa10.41□□□□□ -0.74
USP42-203ENST00000426246 TAX1BP3O14907 124 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 SCGB2A1O75556 95 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 HBDP02042 147 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 KLF5Q13887 457 aaPredicted RBP10.4□□□□□ -0.74
USP42-203ENST00000426246 RASL11AQ6T310 242 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 PET117Q6UWS5 81 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 ZNF502Q8TBZ5 544 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 MEGF9Q9H1U4 602 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 PPP1R14DQ9NXH3 145 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 FAM104BQ5XKR9 115 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 PVRIGQ6DKI7 326 aa10.4□□□□□ -0.74
USP42-203ENST00000426246 ANKRD17O75179 2603 aaKnown RBP10.4□□□□□ -0.74
USP42-203ENST00000426246 COTL1Q14019 142 aa10.4□□□□□ -0.75
USP42-203ENST00000426246 ORAOV1Q8WV07 137 aa10.4□□□□□ -0.75
USP42-203ENST00000426246 TRAV40A0A0B4J280 105 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 HAX1O00165 279 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 ZC2HC1BQ5TFG8 222 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 DUX5Q96PT3 197 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 FBN2P35556 2912 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 CTSGP08311 255 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 S100A7AQ86SG5 101 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 KIR3DS1Q14943 382 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 LINC00477Q96M19 166 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 ZNF492Q9P255 531 aa10.39□□□□□ -0.75
USP42-203ENST00000426246 BMI1P35226 326 aa10.38□□□□□ -0.75
USP42-203ENST00000426246 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
USP42-203ENST00000426246 CFHR4Q92496 578 aa10.38□□□□□ -0.75
USP42-203ENST00000426246 CST9LQ9H4G1 147 aa10.38□□□□□ -0.75
USP42-203ENST00000426246 JMJD8Q96S16 334 aa10.38□□□□□ -0.75
USP42-203ENST00000426246 NBPF19A0A087WUL8 3843 aa10.38□□□□□ -0.75
USP42-203ENST00000426246 RNASE4P34096 147 aaKnown RBP10.38□□□□□ -0.75
USP42-203ENST00000426246 KHDC1LQ5JSQ8 128 aa10.38□□□□□ -0.75
USP42-203ENST00000426246 SAPCD1Q5SSQ6 148 aa10.38□□□□□ -0.75
USP42-203ENST00000426246 ZNF562Q6V9R5 426 aa10.38□□□□□ -0.75
USP42-203ENST00000426246 OR2K2Q8NGT1 345 aa10.38□□□□□ -0.75
USP42-203ENST00000426246 CCDC144NLQ6NUI1 221 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 H7C2G1 150 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 TNFRSF6BO95407 300 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 GAGE1Q13065 139 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 C8orf31Q8N9H6 132 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 SPCS1Q9Y6A9 102 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 PRB1P04280 392 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 AMTNQ6UX39 209 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 METTL26Q96S19 204 aa10.37□□□□□ -0.75
USP42-203ENST00000426246 NRGNQ92686 78 aa10.36□□□□□ -0.75
USP42-203ENST00000426246 SCRT2Q9NQ03 307 aa10.36□□□□□ -0.75
USP42-203ENST00000426246 PEF1Q9UBV8 284 aaKnown RBP10.36□□□□□ -0.75
USP42-203ENST00000426246 IGHV3-64A0A075B6Q5 118 aa10.36□□□□□ -0.75
USP42-203ENST00000426246 IGHV7-81A0A0B4J1V7 117 aa10.36□□□□□ -0.75
USP42-203ENST00000426246 TRBV12-3P01733 135 aa10.36□□□□□ -0.75
USP42-203ENST00000426246 PRTN3P24158 256 aa10.36□□□□□ -0.75
USP42-203ENST00000426246 TMEM95Q3KNT9 176 aa10.36□□□□□ -0.75
USP42-203ENST00000426246 SCGB1D4Q6XE38 83 aa10.36□□□□□ -0.75
USP42-203ENST00000426246 MYOZ3Q8TDC0 251 aa10.36□□□□□ -0.75
USP42-203ENST00000426246 TRAV30A0A087WSZ9 112 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 CRYGBP07316 175 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 AGPAT4-IT1Q9H0P7 198 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 PHLDA3Q9Y5J5 127 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 A0A0G2JLM5 398 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 A6NDN8 102 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 TNFRSF14Q92956 283 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 HIST1H4GQ99525 98 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 IGKV2D-26A0A0A0MRZ7 120 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 LY6G5BQ8NDX9 201 aa10.35□□□□□ -0.75
USP42-203ENST00000426246 COX8AP10176 69 aa10.34□□□□□ -0.75
USP42-203ENST00000426246 GFRA4Q9GZZ7 299 aa10.34□□□□□ -0.75
USP42-203ENST00000426246 IGLV11-55A0A075B6I3 123 aa10.34□□□□□ -0.75
USP42-203ENST00000426246 A0A087WWL8 130 aa10.34□□□□□ -0.75
USP42-203ENST00000426246 PLP1P60201 277 aa10.34□□□□□ -0.75
USP42-203ENST00000426246 OCIAD2Q56VL3 154 aa10.34□□□□□ -0.75
USP42-203ENST00000426246 SMAD5-AS1Q9Y6J3 95 aa10.34□□□□□ -0.75
USP42-203ENST00000426246 SMIM17P0DL12 118 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 CT83Q5H943 113 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 MRPL35Q9NZE8 188 aaKnown RBP10.33□□□□□ -0.76
USP42-203ENST00000426246 KMT2BQ9UMN6 2715 aaPredicted RBP10.33□□□□□ -0.76
USP42-203ENST00000426246 NF1P21359 2839 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 IGHV2-70DA0A0C4DH43 119 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 OVOL3O00110 214 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 CYSLTR1Q9Y271 337 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 LOC107984156A0A0G2JMH3 177 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 ATP5G2Q06055 141 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 Q5PR19 223 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 ARL17AQ8IVW1 177 aa10.33□□□□□ -0.76
USP42-203ENST00000426246 TMEM14CQ9P0S9 112 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 61.7 ms