RNA–Protein interactions for RNA: ENST00000424463.4

VPS8-204, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS8, Length 2,359 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-204ENST00000424463 ABCA4P78363 2273 aa6.69□□□□□ -1.34
VPS8-204ENST00000424463 ANKHD1Q8IWZ3 2542 aaKnown RBP6.68□□□□□ -1.34
VPS8-204ENST00000424463 ARFGEF3Q5TH69 2177 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 CEBPZOSA8MTT3 80 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 A8MWL6 223 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 NDUFB3O43676 98 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 CSN1S1P47710 185 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 PRB3Q04118 309 aaPredicted RBP6.68□□□□□ -1.34
VPS8-204ENST00000424463 TFF3Q07654 80 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 LYRM7Q5U5X0 104 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 ZNF525Q8N782 197 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 OR9G1Q8NH87 305 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 DLX4Q92988 240 aaPredicted RBP6.68□□□□□ -1.34
VPS8-204ENST00000424463 ASH1LQ9NR48 2969 aaKnown RBP6.68□□□□□ -1.34
VPS8-204ENST00000424463 COL12A1Q99715 3063 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 NCR2O95944 276 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 AMY1AP04745 511 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 GATA1P15976 413 aaPredicted RBP6.68□□□□□ -1.34
VPS8-204ENST00000424463 DLX1P56177 255 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 PCP2Q8IVA1 136 aa6.68□□□□□ -1.34
VPS8-204ENST00000424463 DSCAML1Q8TD84 2053 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 H7C1H1 209 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 PSMB8P28062 276 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 UBE2E1P51965 193 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 NPIPB3Q92617 1050 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 UBE2E2Q96LR5 201 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 ZNF714Q96N38 554 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 SPANXDQ9BXN6 97 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 ZNF331Q9NQX6 463 aaPredicted RBP6.67□□□□□ -1.34
VPS8-204ENST00000424463 TNFRSF19Q9NS68 423 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 PKD1L2Q7Z442 2459 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 IGLL5B9A064 214 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 IGKV1-16P04430 117 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 MOB3BQ86TA1 216 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 ANKRD29Q8N6D5 301 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 GNG13Q9P2W3 67 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 HHLA3Q9XRX5 114 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 DOCK11Q5JSL3 2073 aa6.67□□□□□ -1.34
VPS8-204ENST00000424463 UBE2L5PA0A1B0GUS4 154 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 SRRM4A7MD48 611 aaKnown RBP6.66□□□□□ -1.34
VPS8-204ENST00000424463 CHEK1O14757 476 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 NDUFC2O95298 119 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 APCSP02743 223 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 ERVK-16P61578 105 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 HBG1P69891 147 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 HBG2P69892 147 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 CCDC140Q96MF4 163 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 CACNA1AO00555 2505 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 PMS2P5A8MQ11 134 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 GNLYP22749 145 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 ZNF493Q6ZR52 646 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 POM121L12Q8N7R1 296 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 SRSF12Q8WXF0 261 aaKnown RBP6.66□□□□□ -1.34
VPS8-204ENST00000424463 MRPL20Q9BYC9 149 aaKnown RBP6.66□□□□□ -1.34
VPS8-204ENST00000424463 KAAG1Q9UBP8 84 aa6.66□□□□□ -1.34
VPS8-204ENST00000424463 TRBV7-7A0A0K0K1E9 115 aa6.65□□□□□ -1.34
VPS8-204ENST00000424463 C15orf62A8K5M9 175 aa6.65□□□□□ -1.34
VPS8-204ENST00000424463 DSCR8Q96T75 97 aa6.65□□□□□ -1.34
VPS8-204ENST00000424463 F11RQ9Y624 299 aaKnown RBP6.65□□□□□ -1.34
VPS8-204ENST00000424463 CFAP46Q8IYW2 2715 aa6.65□□□□□ -1.34
VPS8-204ENST00000424463 TANC2Q9HCD6 1990 aa6.65□□□□□ -1.34
VPS8-204ENST00000424463 TRAV26-2A0A0B4J265 109 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 A0A1W2PPR1 153 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 P0DMU3 169 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 FAM231AP0DMU4 169 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 FAM231CP0DMU5 169 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 VPREB1P12018 145 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 GP9P14770 177 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 SBSPONQ8IVN8 264 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 CIARTQ8N365 385 aaPredicted RBP6.65□□□□□ -1.35
VPS8-204ENST00000424463 PRR26Q8N8Z3 221 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 TAF15Q92804 592 aaKnown RBP eCLIP6.65□□□□□ -1.35
VPS8-204ENST00000424463 GNB1LQ9BYB4 327 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 AGPAT4-IT1Q9H0P7 198 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 SLC39A9Q9NUM3 307 aa6.65□□□□□ -1.35
VPS8-204ENST00000424463 SPTBN1Q01082 2364 aaKnown RBP6.64□□□□□ -1.35
VPS8-204ENST00000424463 NCBP2LA6PVI3 153 aaKnown RBP6.64□□□□□ -1.35
VPS8-204ENST00000424463 P01737 135 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 CD7P09564 240 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 COX7CP15954 63 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 HOXD3P31249 432 aaPredicted RBP6.64□□□□□ -1.35
VPS8-204ENST00000424463 ZNF726P1Q15940 193 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 TMEM155Q4W5P6 130 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 MORN3Q6PF18 240 aaPredicted RBP6.64□□□□□ -1.35
VPS8-204ENST00000424463 ZNF833PQ6ZTB9 187 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 CEND1Q8N111 149 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 ODF3Q96PU9 254 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 SHANK2-AS3Q9BTD1 123 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 HIVEP3Q5T1R4 2406 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 TRAV13-1A0A0B4J241 112 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 USP17L23D6RBM5 183 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 IGHV1-8P0DP01 117 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 HLA-DMBP28068 263 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 LOXL1Q08397 574 aaPredicted RBP6.64□□□□□ -1.35
VPS8-204ENST00000424463 FAM120AOSQ5T036 256 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 SERTAD4-AS1Q5TG53 156 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 TMEM147Q9BVK8 224 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 OTORQ9NRC9 128 aa6.64□□□□□ -1.35
VPS8-204ENST00000424463 ZFP92A6NM28 416 aa6.63□□□□□ -1.35
VPS8-204ENST00000424463 C19orf84I3L1E1 186 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms