RNA–Protein interactions for RNA: ENST00000423335.2

SHISA9-201, Transcript of shisa family member 9, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHISA9, Length 4,043 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA9-201ENST00000423335 CST9LQ9H4G1 147 aa11.94□□□□□ -0.5
SHISA9-201ENST00000423335 MINOS1-NBL1R4GNA1 71 aa11.94□□□□□ -0.5
SHISA9-201ENST00000423335 IGLC7A0M8Q6 106 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 CCL25O15444 150 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 LGALS3P17931 250 aaKnown RBP11.93□□□□□ -0.5
SHISA9-201ENST00000423335 MRPL52Q86TS9 123 aaKnown RBP11.93□□□□□ -0.5
SHISA9-201ENST00000423335 FAM167A-AS1Q96KT0 104 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 CYSLTR1Q9Y271 337 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 NDUFB8O95169 186 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 UBE2E1P51965 193 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 MAST4O15021 2626 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 CD5LO43866 347 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 HLA-DMBP28068 263 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 ZNF479Q96JC4 524 aa11.93□□□□□ -0.5
SHISA9-201ENST00000423335 IGHV1-69DA0A0B4J2H0 117 aa11.92□□□□□ -0.5
SHISA9-201ENST00000423335 IGHV1-69P01742 117 aa11.92□□□□□ -0.5
SHISA9-201ENST00000423335 ZFP36P26651 326 aaKnown RBP11.92□□□□□ -0.5
SHISA9-201ENST00000423335 ZNF503Q96F45 646 aa11.92□□□□□ -0.5
SHISA9-201ENST00000423335 IGHV3-64A0A075B6Q5 118 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 IGHV4-38-2P0DP08 117 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 TMEM95Q3KNT9 176 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 FRYQ5TBA9 3013 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 C14orf178Q8N769 122 aaPredicted RBP11.91□□□□□ -0.5
SHISA9-201ENST00000423335 ZNF492Q9P255 531 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 TEP1Q99973 2627 aaKnown RBP11.91□□□□□ -0.5
SHISA9-201ENST00000423335 CD7P09564 240 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 SRSF1Q07955 248 aaKnown RBP eCLIP11.91□□□□□ -0.5
SHISA9-201ENST00000423335 OCIAD2Q56VL3 154 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 OR9G4Q8NGQ1 327 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 SLC50A1Q9BRV3 221 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 SIGLEC8Q9NYZ4 499 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 KAAG1Q9UBP8 84 aa11.91□□□□□ -0.5
SHISA9-201ENST00000423335 FAM104BQ5XKR9 115 aa11.9□□□□□ -0.5
SHISA9-201ENST00000423335 PAX8Q06710 450 aa11.9□□□□□ -0.5
SHISA9-201ENST00000423335 PSMB11A5LHX3 300 aa11.9□□□□□ -0.5
SHISA9-201ENST00000423335 MRPL51Q4U2R6 128 aaKnown RBP11.9□□□□□ -0.5
SHISA9-201ENST00000423335 TEX29Q8N6K0 151 aa11.9□□□□□ -0.5
SHISA9-201ENST00000423335 GFRA4Q9GZZ7 299 aa11.9□□□□□ -0.5
SHISA9-201ENST00000423335 ZNF815PA8K554 130 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 SPRY2O43597 315 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 NPYP01303 97 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 GAGE1Q13065 139 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 GTSF1LQ9H1H1 148 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 DMXL2Q8TDJ6 3036 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 TRAV26-2A0A0B4J265 109 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 NDUFS8O00217 210 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 TNFRSF6BO95407 300 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 CT83Q5H943 113 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 IGHV4-59P01825 116 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 BVES-AS1Q5T3Y7 98 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 RNASE8Q8TDE3 154 aaKnown RBP11.89□□□□□ -0.51
SHISA9-201ENST00000423335 GTSF1Q8WW33 167 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 VGLL1Q99990 258 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 IGF2BP2-AS1Q96M15 143 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 NCOR1P1Q9H4R4 102 aa11.89□□□□□ -0.51
SHISA9-201ENST00000423335 ZNF562Q6V9R5 426 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 LYPD1Q8N2G4 141 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 THAP8Q8NA92 274 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 TP53TG3Q9ULZ0 132 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 OVOL3O00110 214 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 ZNF491Q8N8L2 437 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 ZNF688P0C7X2 276 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 BLCAPP62952 87 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 LAGE3Q14657 143 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 C1orf122Q6ZSJ8 110 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 ZNF843Q8N446 348 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 PIP4P2Q8N4L2 257 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 PRR25Q96S07 402 aa11.88□□□□□ -0.51
SHISA9-201ENST00000423335 SAMD13Q5VXD3 122 aa11.87□□□□□ -0.51
SHISA9-201ENST00000423335 DKK2Q9UBU2 259 aa11.87□□□□□ -0.51
SHISA9-201ENST00000423335 CHTOPQ9Y3Y2 248 aaKnown RBP11.87□□□□□ -0.51
SHISA9-201ENST00000423335 SIGLEC15Q6ZMC9 328 aa11.87□□□□□ -0.51
SHISA9-201ENST00000423335 DUX3Q96PT4 197 aa11.87□□□□□ -0.51
SHISA9-201ENST00000423335 LTAP01374 205 aa11.87□□□□□ -0.51
SHISA9-201ENST00000423335 DEFB112Q30KQ8 113 aa11.87□□□□□ -0.51
SHISA9-201ENST00000423335 SYT8Q8NBV8 401 aa11.87□□□□□ -0.51
SHISA9-201ENST00000423335 IGKV3D-20A0A0C4DH25 116 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 IGKV1-17P01599 117 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 FBXL19-AS1Q494R0 122 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 IGKV3OR2-268A0A0C4DH90 116 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 SNRPD3P62318 126 aaKnown RBP11.86□□□□□ -0.51
SHISA9-201ENST00000423335 ZNF747Q9BV97 191 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 OOSP1A8MZH6 123 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 COX8AP10176 69 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 GATA1P15976 413 aaPredicted RBP11.86□□□□□ -0.51
SHISA9-201ENST00000423335 SYNJ2BPP57105 145 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 LINC00322Q6ZN03 302 aaPredicted RBP11.86□□□□□ -0.51
SHISA9-201ENST00000423335 PCP2Q8IVA1 136 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 CHAC1Q9BUX1 264 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 MSRB1Q9NZV6 116 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 RNF114Q9Y508 228 aa11.86□□□□□ -0.51
SHISA9-201ENST00000423335 TRAV21A0A0B4J279 112 aa11.85□□□□□ -0.51
SHISA9-201ENST00000423335 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
SHISA9-201ENST00000423335 RNF5Q99942 180 aa11.85□□□□□ -0.51
SHISA9-201ENST00000423335 TTTY13Q9BZ97 58 aa11.85□□□□□ -0.51
SHISA9-201ENST00000423335 KLHL30-AS1Q8NEE0 82 aa11.85□□□□□ -0.51
SHISA9-201ENST00000423335 LINC00311Q8N616 119 aa11.85□□□□□ -0.51
SHISA9-201ENST00000423335 K7EMI3 77 aa11.84□□□□□ -0.51
SHISA9-201ENST00000423335 HOXA3O43365 443 aaPredicted RBP11.84□□□□□ -0.51
SHISA9-201ENST00000423335 IGLV2-8P01709 118 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 140.7 ms