RNA–Protein interactions for RNA: ENST00000421263.1

VARS2-202, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 460 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-202ENST00000421263 Q6ZRN7 208 aaPredicted RBP12.96□□□□□ -0.33
VARS2-202ENST00000421263 PRO0255Q9UI72 69 aa12.96□□□□□ -0.33
VARS2-202ENST00000421263 INMT-MINDY4F8WBC2 141 aa12.95□□□□□ -0.34
VARS2-202ENST00000421263 SIVA1O15304 175 aa12.95□□□□□ -0.34
VARS2-202ENST00000421263 RANP62826 216 aaKnown RBP12.95□□□□□ -0.34
VARS2-202ENST00000421263 SLAQ13239 276 aa12.95□□□□□ -0.34
VARS2-202ENST00000421263 FHL2Q14192 279 aa12.95□□□□□ -0.34
VARS2-202ENST00000421263 ZNF266Q14584 549 aa12.95□□□□□ -0.34
VARS2-202ENST00000421263 MAPKAPK5-AS1Q8N8E1 139 aa12.95□□□□□ -0.34
VARS2-202ENST00000421263 Q8TAT8 98 aa12.95□□□□□ -0.34
VARS2-202ENST00000421263 MRPL16Q9NX20 251 aaKnown RBP12.95□□□□□ -0.34
VARS2-202ENST00000421263 ICOSQ9Y6W8 199 aa12.95□□□□□ -0.34
VARS2-202ENST00000421263 CRYBA4P53673 196 aa12.94□□□□□ -0.34
VARS2-202ENST00000421263 LINC00315P59091 139 aa12.94□□□□□ -0.34
VARS2-202ENST00000421263 PPP1R1CQ8WVI7 109 aa12.94□□□□□ -0.34
VARS2-202ENST00000421263 ATP5SQ99766 215 aa12.94□□□□□ -0.34
VARS2-202ENST00000421263 ARPC5LQ9BPX5 153 aa12.94□□□□□ -0.34
VARS2-202ENST00000421263 MARVELD1Q9BSK0 173 aa12.94□□□□□ -0.34
VARS2-202ENST00000421263 HHLA3Q9XRX5 114 aa12.94□□□□□ -0.34
VARS2-202ENST00000421263 OR7C2O60412 319 aa12.93□□□□□ -0.34
VARS2-202ENST00000421263 IGHV3-53P01767 116 aa12.93□□□□□ -0.34
VARS2-202ENST00000421263 CSN1S1P47710 185 aa12.93□□□□□ -0.34
VARS2-202ENST00000421263 Q6AWC8 147 aa12.93□□□□□ -0.34
VARS2-202ENST00000421263 LYPD5Q6UWN5 251 aa12.93□□□□□ -0.34
VARS2-202ENST00000421263 IQCF2Q8IXL9 164 aa12.93□□□□□ -0.34
VARS2-202ENST00000421263 HSPB11Q9Y547 144 aa12.93□□□□□ -0.34
VARS2-202ENST00000421263 LENEPQ9Y5L5 61 aa12.93□□□□□ -0.34
VARS2-202ENST00000421263 DIRC3C9JPN6 131 aa12.92□□□□□ -0.34
VARS2-202ENST00000421263 MPC2O95563 127 aa12.92□□□□□ -0.34
VARS2-202ENST00000421263 ZNF415Q09FC8 603 aa12.92□□□□□ -0.34
VARS2-202ENST00000421263 RASL10AQ92737 203 aa12.92□□□□□ -0.34
VARS2-202ENST00000421263 MDFICQ9P1T7 246 aa12.92□□□□□ -0.34
VARS2-202ENST00000421263 NXPH4O95158 308 aa12.91□□□□□ -0.34
VARS2-202ENST00000421263 MRPL23Q16540 153 aaKnown RBP12.91□□□□□ -0.34
VARS2-202ENST00000421263 FFAR4Q5NUL3 377 aa12.91□□□□□ -0.34
VARS2-202ENST00000421263 Q8N1X5 172 aa12.91□□□□□ -0.34
VARS2-202ENST00000421263 TMED6Q8WW62 240 aa12.91□□□□□ -0.34
VARS2-202ENST00000421263 UBE2L3P68036 154 aaKnown RBP12.9□□□□□ -0.34
VARS2-202ENST00000421263 MUC21Q5SSG8 566 aa12.9□□□□□ -0.34
VARS2-202ENST00000421263 C8orf49Q96NF6 230 aa12.9□□□□□ -0.34
VARS2-202ENST00000421263 SPXQ9BT56 116 aa12.9□□□□□ -0.34
VARS2-202ENST00000421263 A6NHS1 94 aa12.89□□□□□ -0.35
VARS2-202ENST00000421263 RPL12P30050 165 aaKnown RBP12.89□□□□□ -0.35
VARS2-202ENST00000421263 TAS2R45P59539 299 aa12.89□□□□□ -0.35
VARS2-202ENST00000421263 TDRG1Q3Y452 100 aa12.89□□□□□ -0.35
VARS2-202ENST00000421263 KHDC3LQ587J8 217 aa12.89□□□□□ -0.35
VARS2-202ENST00000421263 NEGR1Q7Z3B1 354 aa12.89□□□□□ -0.35
VARS2-202ENST00000421263 OR10G4Q8NGN3 311 aa12.89□□□□□ -0.35
VARS2-202ENST00000421263 IFNA5P01569 189 aa12.88□□□□□ -0.35
VARS2-202ENST00000421263 ARL6IP6Q8N6S5 226 aa12.88□□□□□ -0.35
VARS2-202ENST00000421263 SCGB1C1Q8TD33 95 aa12.88□□□□□ -0.35
VARS2-202ENST00000421263 ZNF479Q96JC4 524 aa12.88□□□□□ -0.35
VARS2-202ENST00000421263 TRGV4A0A0C4DH28 118 aa12.87□□□□□ -0.35
VARS2-202ENST00000421263 SFTA3P0C7M3 94 aa12.87□□□□□ -0.35
VARS2-202ENST00000421263 PET100P0DJ07 73 aa12.87□□□□□ -0.35
VARS2-202ENST00000421263 FAM159AQ6UWV7 190 aa12.87□□□□□ -0.35
VARS2-202ENST00000421263 WFDC1Q9HC57 220 aa12.87□□□□□ -0.35
VARS2-202ENST00000421263 OTORQ9NRC9 128 aa12.87□□□□□ -0.35
VARS2-202ENST00000421263 PGPEP1Q9NXJ5 209 aa12.87□□□□□ -0.35
VARS2-202ENST00000421263 TNFRSF18Q9Y5U5 241 aa12.87□□□□□ -0.35
VARS2-202ENST00000421263 TRGV11A0A075B6L2 103 aa12.86□□□□□ -0.35
VARS2-202ENST00000421263 PGPA6NDG6 321 aa12.86□□□□□ -0.35
VARS2-202ENST00000421263 K7EQD1 137 aa12.86□□□□□ -0.35
VARS2-202ENST00000421263 TMEM183BQ1AE95 376 aa12.86□□□□□ -0.35
VARS2-202ENST00000421263 TMEM183AQ8IXX5 376 aa12.86□□□□□ -0.35
VARS2-202ENST00000421263 SMIM3Q9BZL3 60 aa12.86□□□□□ -0.35
VARS2-202ENST00000421263 SCRT2Q9NQ03 307 aa12.86□□□□□ -0.35
VARS2-202ENST00000421263 MBD2Q9UBB5 411 aa12.86□□□□□ -0.35
VARS2-202ENST00000421263 SSNA1O43805 119 aa12.85□□□□□ -0.35
VARS2-202ENST00000421263 EIF3GO75821 320 aaKnown RBP eCLIP12.85□□□□□ -0.35
VARS2-202ENST00000421263 PQLC2Q6ZP29 291 aa12.85□□□□□ -0.35
VARS2-202ENST00000421263 HYLS1Q96M11 299 aa12.85□□□□□ -0.35
VARS2-202ENST00000421263 PTTG2Q9NZH5 202 aa12.85□□□□□ -0.35
VARS2-202ENST00000421263 K7EP13 123 aa12.84□□□□□ -0.35
VARS2-202ENST00000421263 GNRH2O43555 120 aa12.84□□□□□ -0.35
VARS2-202ENST00000421263 NFE4Q86UQ8 179 aa12.84□□□□□ -0.35
VARS2-202ENST00000421263 TVP23CQ96ET8 276 aa12.84□□□□□ -0.35
VARS2-202ENST00000421263 TRAV9-2A0A087WT02 112 aa12.83□□□□□ -0.36
VARS2-202ENST00000421263 TRAV4A0A0B4J268 109 aa12.83□□□□□ -0.36
VARS2-202ENST00000421263 IGHV3-16A0A0C4DH30 117 aa12.83□□□□□ -0.36
VARS2-202ENST00000421263 ORM1P02763 201 aa12.83□□□□□ -0.36
VARS2-202ENST00000421263 GYPEP15421 78 aa12.83□□□□□ -0.36
VARS2-202ENST00000421263 SRIP30626 198 aa12.83□□□□□ -0.36
VARS2-202ENST00000421263 ACOT6Q3I5F7 207 aaPredicted RBP12.83□□□□□ -0.36
VARS2-202ENST00000421263 FAM74A1Q5RGS3 127 aa12.83□□□□□ -0.36
VARS2-202ENST00000421263 CMTM2Q8TAZ6 248 aa12.83□□□□□ -0.36
VARS2-202ENST00000421263 LY96Q9Y6Y9 160 aa12.83□□□□□ -0.36
VARS2-202ENST00000421263 A0A1W2PPV4 95 aa12.82□□□□□ -0.36
VARS2-202ENST00000421263 TRAV21A0A0B4J279 112 aa12.81□□□□□ -0.36
VARS2-202ENST00000421263 M0R2P5 195 aa12.81□□□□□ -0.36
VARS2-202ENST00000421263 DEFA1P59665 94 aa12.81□□□□□ -0.36
VARS2-202ENST00000421263 DEFA3P59666 94 aa12.81□□□□□ -0.36
VARS2-202ENST00000421263 CDPF1Q6NVV7 123 aa12.81□□□□□ -0.36
VARS2-202ENST00000421263 GOLT1AQ6ZVE7 132 aa12.81□□□□□ -0.36
VARS2-202ENST00000421263 WFDC10BQ8IUB3 73 aa12.81□□□□□ -0.36
VARS2-202ENST00000421263 FAT1Q14517 4588 aa12.81□□□□□ -0.36
VARS2-202ENST00000421263 EREGO14944 169 aa12.8□□□□□ -0.36
VARS2-202ENST00000421263 TYMSP04818 313 aa12.8□□□□□ -0.36
VARS2-202ENST00000421263 DNAH10OSP0CZ25 163 aa12.8□□□□□ -0.36
VARS2-202ENST00000421263 ERVFC1-1P60608 527 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 67 ms