RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 LEPP41159 167 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 CRIP1P50238 77 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 ERVFC1-1P60608 527 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 EGFEM1PQ0D2K5 195 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 OR5I1Q13606 314 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 Q6AWC8 147 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 OR10G8Q8NGN5 311 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 Q8TAT8 98 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 V9GYV3 84 aa10.55□□□□□ -0.72
SHMT1P1-201ENST00000419974 MGST1P10620 155 aaKnown RBP10.54□□□□□ -0.72
SHMT1P1-201ENST00000419974 DEFA6Q01524 100 aa10.54□□□□□ -0.72
SHMT1P1-201ENST00000419974 LINC00322Q6ZN03 302 aaPredicted RBP10.54□□□□□ -0.72
SHMT1P1-201ENST00000419974 NUDT10Q8NFP7 164 aa10.54□□□□□ -0.72
SHMT1P1-201ENST00000419974 NUDT11Q96G61 164 aa10.54□□□□□ -0.72
SHMT1P1-201ENST00000419974 RPS10P5Q9NQ39 176 aa10.54□□□□□ -0.72
SHMT1P1-201ENST00000419974 SMCO4Q9NRQ5 59 aa10.54□□□□□ -0.72
SHMT1P1-201ENST00000419974 H7BYZ3 331 aa10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 AMBPP02760 352 aa10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 CXCL1P09341 107 aa10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 ZNF705DP0CH99 300 aaPredicted RBP10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 ZNF705BP0CI00 300 aaPredicted RBP10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 IGLL1P15814 213 aa10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 CDKN1BP46527 198 aa10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 FOXA3P55318 350 aaPredicted RBP10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 TRPT1Q86TN4 253 aaKnown RBP10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 NHLRC2Q8NBF2 726 aa10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 DAZAP1Q96EP5 407 aaKnown RBP10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 C8orf49Q96NF6 230 aa10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 GFRA4Q9GZZ7 299 aa10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 AURKAIP1Q9NWT8 199 aaPredicted RBP10.53□□□□□ -0.72
SHMT1P1-201ENST00000419974 TRAV9-1A0A075B6T8 112 aa10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 P01737 135 aa10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 CD7P09564 240 aa10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 DEFB1P60022 68 aa10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 ACTL10Q5JWF8 245 aa10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 GTSCR1Q86UQ5 136 aa10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 C20orf144Q9BQM9 153 aa10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 RNASE7Q9H1E1 156 aaKnown RBP10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 RPP21Q9H633 154 aaKnown RBP10.52□□□□□ -0.73
SHMT1P1-201ENST00000419974 TRAV21A0A0B4J279 112 aa10.51□□□□□ -0.73
SHMT1P1-201ENST00000419974 ZNF324O75467 553 aaPredicted RBP10.51□□□□□ -0.73
SHMT1P1-201ENST00000419974 ZNF80P51504 273 aaPredicted RBP10.51□□□□□ -0.73
SHMT1P1-201ENST00000419974 RPS20P60866 119 aaKnown RBP10.51□□□□□ -0.73
SHMT1P1-201ENST00000419974 TSKUQ8WUA8 353 aa10.51□□□□□ -0.73
SHMT1P1-201ENST00000419974 BTF3L4Q96K17 158 aa10.51□□□□□ -0.73
SHMT1P1-201ENST00000419974 YPEL4Q96NS1 127 aa10.51□□□□□ -0.73
SHMT1P1-201ENST00000419974 SMIM27A0A1W2PRY6 76 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 KNCNA6PVL3 124 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 A8MWL6 223 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 GATCO43716 136 aaKnown RBP10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 SH2D1AO60880 128 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 GPX1P07203 203 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 NUTF2P61970 127 aaKnown RBP10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 TDRG1Q3Y452 100 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 MORN3Q6PF18 240 aaPredicted RBP10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 ZNF575Q86XF7 245 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 STHQ8IWL8 128 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 Q8N1Y9 231 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 PYGO2Q9BRQ0 406 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 IL36BQ9NZH7 164 aa10.5□□□□□ -0.73
SHMT1P1-201ENST00000419974 XKRY2A2RUG3 117 aa10.49□□□□□ -0.73
SHMT1P1-201ENST00000419974 ZNF705GA8MUZ8 300 aaPredicted RBP10.49□□□□□ -0.73
SHMT1P1-201ENST00000419974 DNLZQ5SXM8 178 aa10.49□□□□□ -0.73
SHMT1P1-201ENST00000419974 PRR27Q6MZM9 219 aa10.49□□□□□ -0.73
SHMT1P1-201ENST00000419974 LINC00467Q9BRT7 94 aa10.49□□□□□ -0.73
SHMT1P1-201ENST00000419974 TRBV24-1A0A075B6N3 115 aa10.48□□□□□ -0.73
SHMT1P1-201ENST00000419974 C7orf71A4D174 169 aa10.48□□□□□ -0.73
SHMT1P1-201ENST00000419974 RBMY1BA6NDE4 496 aaKnown RBP10.48□□□□□ -0.73
SHMT1P1-201ENST00000419974 RBMY1EA6NEQ0 496 aaKnown RBP10.48□□□□□ -0.73
SHMT1P1-201ENST00000419974 CRXO43186 299 aaPredicted RBP10.48□□□□□ -0.73
SHMT1P1-201ENST00000419974 RBMY1DP0C7P1 496 aaKnown RBP10.48□□□□□ -0.73
SHMT1P1-201ENST00000419974 PRR9Q5T870 116 aa10.48□□□□□ -0.73
SHMT1P1-201ENST00000419974 KCNIP4Q6PIL6 250 aa10.48□□□□□ -0.73
SHMT1P1-201ENST00000419974 A8MZ25 164 aa10.47□□□□□ -0.73
SHMT1P1-201ENST00000419974 PRB4P10163 310 aaPredicted RBP10.47□□□□□ -0.73
SHMT1P1-201ENST00000419974 S100PP25815 95 aa10.47□□□□□ -0.73
SHMT1P1-201ENST00000419974 ZNF124Q15973 351 aa10.47□□□□□ -0.73
SHMT1P1-201ENST00000419974 SAMD5Q5TGI4 173 aa10.47□□□□□ -0.73
SHMT1P1-201ENST00000419974 TP53TG3Q9ULZ0 132 aa10.47□□□□□ -0.73
SHMT1P1-201ENST00000419974 DNAH3Q8TD57 4116 aa10.47□□□□□ -0.73
SHMT1P1-201ENST00000419974 PRKDCP78527 4128 aaKnown RBP10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 A0A1W2PPQ1 181 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 SCO1O75880 301 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 BTN1A1Q13410 526 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 ELOBQ15370 118 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 GFI1BQ5VTD9 330 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 CBLN2Q8IUK8 224 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 OR2D3Q8NGH3 330 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 KCNS1Q96KK3 526 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 C1QTNF4Q9BXJ3 329 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 NAT8BQ9UHF3 227 aa10.46□□□□□ -0.73
SHMT1P1-201ENST00000419974 TGP01266 2768 aa10.46□□□□□ -0.74
SHMT1P1-201ENST00000419974 IGKV3D-20A0A0C4DH25 116 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 KIR2DL5BA0A0G2JN68 375 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 KIR2DL5BA0A0G2JPC4 375 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 TMEM189A5PLL7 270 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 COLCA2A8K830 154 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 TYMSP04818 313 aa10.45□□□□□ -0.74
SHMT1P1-201ENST00000419974 MED14OSP0DP75 135 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 98.5 ms