RNA–Protein interactions for RNA: ENST00000418646.5

GPCPD1-202, Transcript of glycerophosphocholine phosphodiesterase 1, humanhuman

TSL 5

Gene GPCPD1, Length 4,015 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPCPD1-202ENST00000418646 FCER1GP30273 86 aa3.38□□□□□ -1.87
GPCPD1-202ENST00000418646 UBE2D1P51668 147 aa3.38□□□□□ -1.87
GPCPD1-202ENST00000418646 LYZL1Q6UWQ5 148 aa3.38□□□□□ -1.87
GPCPD1-202ENST00000418646 Q6ZN92 141 aa3.38□□□□□ -1.87
GPCPD1-202ENST00000418646 Q6ZVH6 145 aa3.38□□□□□ -1.87
GPCPD1-202ENST00000418646 Q8N8P6 123 aa3.38□□□□□ -1.87
GPCPD1-202ENST00000418646 NEXN-AS1Q8NBZ9 246 aa3.38□□□□□ -1.87
GPCPD1-202ENST00000418646 MUC21A0A0G2JKD1 596 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 TRBV6-5A0A0K0K1A5 114 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 MUC21A0A140T8X8 626 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 UBE2E1P51965 193 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 KRTDAPP60985 99 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 ERCC8Q13216 396 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 PRR30Q53SZ7 412 aaPredicted RBP3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 MUC21Q5SSG8 566 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 LEMD1Q68G75 181 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 C12orf54Q6X4T0 127 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 TOMM6Q96B49 74 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 LINC00467Q9BRT7 94 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 DPM3Q9P2X0 92 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 F8P00451 2351 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 IGLV4-69A0A075B6H9 119 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 RAB9AP51151 201 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 HNRNPA3P51991 378 aaKnown RBP3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 RIPPLY3P57055 190 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 SLC25A34Q6PIV7 304 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 IL17DQ8TAD2 202 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 PGLYRP4Q96LB8 373 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 VGLL1Q99990 258 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 CENPEQ02224 2701 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 TMEM213A2RRL7 107 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 PRAC2D3DTV9 90 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 D6R8Y8 96 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 TOX4O94842 621 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 HBDP02042 147 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 HSD52Q0P140 79 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 RIGQ13278 110 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 C21orf62-AS1Q17RA5 79 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 GOLT1AQ6ZVE7 132 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 ORMDL3Q8N138 153 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 SPATA25Q9BR10 227 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 CST9LQ9H4G1 147 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 AP5S1Q9NUS5 200 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 RAXQ9Y2V3 346 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 CSPG4Q6UVK1 2322 aa3.37□□□□□ -1.87
GPCPD1-202ENST00000418646 OR2T8A6NH00 312 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 TCF21O43680 179 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 UBE2D3P61077 147 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 ARF6P62330 175 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 UBE2D2P62837 147 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 MORN3Q6PF18 240 aaPredicted RBP3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 OR4X2Q8NGF9 303 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 ARPC1AQ92747 370 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 C20orf173Q96LM9 149 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 SLC50A1Q9BRV3 221 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 SAMD10Q9BYL1 202 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP3.36□□□□□ -1.872e-10■■■■■ 39.2
GPCPD1-202ENST00000418646 NOTCH3Q9UM47 2321 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 NBEAL1Q6ZS30 2694 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 TLN2Q9Y4G6 2542 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 IGIPA6NJ69 53 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 GRNP28799 593 aaKnown RBP3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 GPR183P32249 361 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 DLX1P56177 255 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 OCIAD2Q56VL3 154 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 ZNF705AQ6ZN79 300 aaPredicted RBP3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 VMO1Q7Z5L0 202 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 TMEM158Q8WZ71 300 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 MRAP2Q96G30 205 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 C9orf85Q96MD7 179 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 RASL11BQ9BPW5 248 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 SPANXB1Q9NS25 103 aaPredicted RBP3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 TRRAPQ9Y4A5 3859 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 CADP27708 2225 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 TRBV7-1A0A0A6YYK4 115 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 M0R3E3 92 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 HSBP1O75506 76 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 CD7P09564 240 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 RNASE3P12724 160 aaKnown RBP3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 POLR2KP53803 58 aaKnown RBP3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 PIK3CD-AS1Q5SR53 167 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 SDIM1Q6ZPB5 146 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 OR5T1Q8NG75 326 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 BORCS7Q96B45 105 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 LYSTQ99698 3801 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 SPXQ9BT56 116 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 MAP1LC3CQ9BXW4 147 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 CFAP46Q8IYW2 2715 aa3.36□□□□□ -1.87
GPCPD1-202ENST00000418646 ZNF705FA8MVS1 300 aaPredicted RBP3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 ZNF705DP0CH99 300 aaPredicted RBP3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 ZNF705BP0CI00 300 aaPredicted RBP3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 FAM180AQ6UWF9 173 aa3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 C9orf139Q6ZV77 190 aa3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 RASL10AQ92737 203 aa3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 C20orf78Q9BR46 151 aa3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 CSTL1Q9H114 145 aa3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 NXT2Q9NPJ8 142 aaKnown RBP3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 A0A0J9YX75 114 aa3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 FAM223BA6NKX1 122 aa3.35□□□□□ -1.87
GPCPD1-202ENST00000418646 MGST1P10620 155 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms