RNA–Protein interactions for RNA: ENST00000418457.6

VPS41-206, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-206ENST00000418457 LINC00305Q7Z4B0 112 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 Q86TA4 180 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 BOD1L2Q8IYS8 172 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 LYPD1Q8N2G4 141 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 ZCCHC24Q8N2G6 241 aaKnown RBP1.92□□□□□ -2.1
VPS41-206ENST00000418457 C8orf31Q8N9H6 132 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TMEM75Q8N9X5 138 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 OR4C13Q8NGP0 309 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 OR2K2Q8NGT1 345 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TMEM167AQ8TBQ9 72 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 CT55Q8WUE5 264 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 BLNKQ8WV28 456 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 FXYD5Q96DB9 178 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TRGV9Q99603 122 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 HINT2Q9BX68 163 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 VCX2Q9H322 139 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 OTORQ9NRC9 128 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 NDUFA4L2Q9NRX3 87 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 TMEM14CQ9P0S9 112 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 HIGD1BQ9P298 99 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 SMPXQ9UHP9 88 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 RABAC1Q9UI14 185 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 RPH3ALQ9UNE2 315 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 ZNF835Q9Y2P0 537 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 PPIAL4AQ9Y536 164 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 KIF25-AS1Q9Y6Z4 181 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 DYSFO75923 2080 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 DSCAML1Q8TD84 2053 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 MYO9BQ13459 2157 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 FREM1Q5H8C1 2179 aa1.92□□□□□ -2.1
VPS41-206ENST00000418457 PI4KAP42356 2102 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 DIDO1Q9BTC0 2240 aaKnown RBP1.91□□□□□ -2.1
VPS41-206ENST00000418457 KNL1Q8NG31 2342 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 DOCK10Q96BY6 2186 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 IGKV1OR2-108A0A075B7D4 117 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 TRAV8-6A0A0B4J262 113 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 A0A0G2JLM5 398 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 hADV38S2A0JD32 116 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 PGPA6NDG6 321 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 PPIAL4DF5H284 164 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 F8W1H4 67 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 SCGB2A1O75556 95 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 NDUFA7O95182 113 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 MOSP00540 346 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 CA1P00915 261 aaPredicted RBP1.91□□□□□ -2.1
VPS41-206ENST00000418457 LHBP01229 141 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 HBDP02042 147 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 SMIM13P0DJ93 91 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 SAA1P0DJI8 122 aaPredicted RBP1.91□□□□□ -2.1
VPS41-206ENST00000418457 PYYP10082 97 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 FGF6P10767 208 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 CCL4P13236 92 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 IGHV1-2P23083 117 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 S100A7P31151 101 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 LGALS7P47929 136 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 SRSF6Q13247 344 aaKnown RBP1.91□□□□□ -2.1
VPS41-206ENST00000418457 GUSBP1Q15486 140 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 LTC4SQ16873 150 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 VMA21Q3ZAQ7 101 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 PVRIGQ6DKI7 326 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 Q6ZR03 302 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 Q6ZS92 163 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 ZNF826PQ6ZT77 177 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 ZNF833PQ6ZTB9 187 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 C2orf91Q6ZV80 131 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 VKORC1L1Q8N0U8 176 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 ZADH2Q8N4Q0 377 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 LINC00311Q8N616 119 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 TPRX1Q8N7U7 411 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 MDS2Q8NDY4 140 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 OR9G1Q8NH87 305 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 FLYWCH2Q96CP2 140 aaKnown RBP1.91□□□□□ -2.1
VPS41-206ENST00000418457 VSIG2Q96IQ7 327 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 PGLYRP4Q96LB8 373 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 SIGMAR1Q99720 223 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 SLC25A39Q9BZJ4 359 aaPredicted RBP1.91□□□□□ -2.1
VPS41-206ENST00000418457 Q9H3A6 140 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 RPUSD1Q9UJJ7 312 aaKnown RBP1.91□□□□□ -2.1
VPS41-206ENST00000418457 SPCS1Q9Y6A9 102 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 LINC00312Q9Y6C7 94 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 U3KQK5 164 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 FRYQ5TBA9 3013 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 WDR87Q6ZQQ6 2873 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 LOC400499M0QZD8 3231 aa1.91□□□□□ -2.1
VPS41-206ENST00000418457 COL27A1Q8IZC6 1860 aaPredicted RBP1.9□□□□□ -2.1
VPS41-206ENST00000418457 ZZEF1O43149 2961 aa1.9□□□□□ -2.1
VPS41-206ENST00000418457 RAI1Q7Z5J4 1906 aaPredicted RBP1.9□□□□□ -2.11
VPS41-206ENST00000418457 IGLV3-9A0A075B6K5 115 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 IGKV1D-37A0A075B6S9 117 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 TRAV5A0A0B4J249 113 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 IGHV1-18A0A0C4DH31 117 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 LINC01546A6NGU7 62 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 LINC01619G3V211 115 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 H3BUT2 72 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 K7EM74 188 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 LYZL6O75951 148 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 ATP5LO75964 103 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 FSTL3O95633 263 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 IGHV3-7P01780 117 aa1.9□□□□□ -2.11
VPS41-206ENST00000418457 CECR9P0C854 216 aa1.9□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms