RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	TRAV8-1	A0A0A6YYK1	113 aa		11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	RBAKDN	A6NC62	111 aa		11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	PPT1	P50897	306 aa		11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	TMEM78	Q5T7P6	136 aa		11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	CCDC28A	Q8IWP9	274 aa		11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	ARL6IP6	Q8N6S5	226 aa		11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	SGK494	Q96LW2	274 aa		11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	LINC00477	Q96M19	166 aa		11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	NKX6-2	Q9C056	277 aa	Predicted RBP	11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	ARL2-SNX15	V9GYD0	113 aa		11.67	□□□□□ -0.54
DDR1-231	ENST00000417521	ZNF705G	A8MUZ8	300 aa	Predicted RBP	11.66	□□□□□ -0.54
DDR1-231	ENST00000417521		J3KRW8	73 aa		11.66	□□□□□ -0.54
DDR1-231	ENST00000417521	KIR3DS1	Q14943	382 aa		11.66	□□□□□ -0.54
DDR1-231	ENST00000417521	LINC01587	Q99440	93 aa		11.66	□□□□□ -0.54
DDR1-231	ENST00000417521	C20orf144	Q9BQM9	153 aa		11.66	□□□□□ -0.54
DDR1-231	ENST00000417521	MANBAL	Q9NQG1	85 aa		11.66	□□□□□ -0.54
DDR1-231	ENST00000417521	ZNF138	P52744	262 aa		11.65	□□□□□ -0.54
DDR1-231	ENST00000417521	TAS2R60	P59551	318 aa		11.65	□□□□□ -0.54
DDR1-231	ENST00000417521	LYPD6B	Q8NI32	183 aa		11.65	□□□□□ -0.54
DDR1-231	ENST00000417521	FAM210B	Q96KR6	192 aa		11.65	□□□□□ -0.54
DDR1-231	ENST00000417521	FAM19A4	Q96LR4	140 aa		11.65	□□□□□ -0.54
DDR1-231	ENST00000417521	LINC00479	Q96M42	142 aa		11.65	□□□□□ -0.54
DDR1-231	ENST00000417521	ATG101	Q9BSB4	218 aa		11.65	□□□□□ -0.54
DDR1-231	ENST00000417521	ZNF492	Q9P255	531 aa		11.65	□□□□□ -0.54
DDR1-231	ENST00000417521	LYRM9	A8MSI8	78 aa		11.64	□□□□□ -0.55
DDR1-231	ENST00000417521	PEX7	O00628	323 aa		11.64	□□□□□ -0.55
DDR1-231	ENST00000417521	PRM2	P04554	102 aa		11.64	□□□□□ -0.55
DDR1-231	ENST00000417521	CYB561D1	Q8N8Q1	229 aa		11.64	□□□□□ -0.55
DDR1-231	ENST00000417521	ODF3	Q96PU9	254 aa		11.64	□□□□□ -0.55
DDR1-231	ENST00000417521	NDUFAF3	Q9BU61	184 aa		11.64	□□□□□ -0.55
DDR1-231	ENST00000417521	VPS13D	Q5THJ4	4388 aa		11.64	□□□□□ -0.55
DDR1-231	ENST00000417521	TRAV34	A0A0B4J273	112 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	SERTM2	A0A1B0GWG4	89 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521		H7BYZ3	331 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	AZU1	P20160	251 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	LEP	P41159	167 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	DAD1	P61803	113 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521		K7EQM0	130 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	IFNA1	P01562	189 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	IGLV2-11	P01706	119 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	BCL2	P10415	239 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	IFITM2	Q01629	132 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	GFI1B	Q5VTD9	330 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	ZNF493	Q6ZR52	646 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	ZFAND2A	Q8N6M9	145 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	HIST1H2BA	Q96A08	127 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	TVP23C	Q96ET8	276 aa		11.63	□□□□□ -0.55
DDR1-231	ENST00000417521	SCO2	A0A1W2PP80	73 aa		11.62	□□□□□ -0.55
DDR1-231	ENST00000417521	NMB	P08949	121 aa		11.62	□□□□□ -0.55
DDR1-231	ENST00000417521	CRISP2	P16562	243 aa		11.62	□□□□□ -0.55
DDR1-231	ENST00000417521	PRR9	Q5T870	116 aa		11.62	□□□□□ -0.55
DDR1-231	ENST00000417521	PSG8	Q9UQ74	426 aa		11.62	□□□□□ -0.55
DDR1-231	ENST00000417521	PLAC8L1	A1L4L8	177 aa		11.61	□□□□□ -0.55
DDR1-231	ENST00000417521		F6UZH7	168 aa		11.61	□□□□□ -0.55
DDR1-231	ENST00000417521	HTN1	P15515	57 aa		11.61	□□□□□ -0.55
DDR1-231	ENST00000417521	FLI1	Q01543	452 aa	Predicted RBP	11.61	□□□□□ -0.55
DDR1-231	ENST00000417521	MEF2B	Q02080	365 aa	Predicted RBP	11.61	□□□□□ -0.55
DDR1-231	ENST00000417521	BTN1A1	Q13410	526 aa		11.61	□□□□□ -0.55
DDR1-231	ENST00000417521	PRNT	Q86SH4	94 aa		11.61	□□□□□ -0.55
DDR1-231	ENST00000417521	TMEM75	Q8N9X5	138 aa		11.61	□□□□□ -0.55
DDR1-231	ENST00000417521	C16orf74	Q96GX8	76 aa		11.61	□□□□□ -0.55
DDR1-231	ENST00000417521	TCEAL7	Q9BRU2	100 aa		11.61	□□□□□ -0.55
DDR1-231	ENST00000417521	TRAV12-3	A0A0B4J271	114 aa		11.6	□□□□□ -0.55
DDR1-231	ENST00000417521	KLLN	B2CW77	178 aa		11.6	□□□□□ -0.55
DDR1-231	ENST00000417521	GPX1	P07203	203 aa		11.6	□□□□□ -0.55
DDR1-231	ENST00000417521		P0DMU3	169 aa		11.6	□□□□□ -0.55
DDR1-231	ENST00000417521	FAM231A	P0DMU4	169 aa		11.6	□□□□□ -0.55
DDR1-231	ENST00000417521	FAM231C	P0DMU5	169 aa		11.6	□□□□□ -0.55
DDR1-231	ENST00000417521	RNASE4	P34096	147 aa	Known RBP	11.6	□□□□□ -0.55
DDR1-231	ENST00000417521	VAX2	Q9UIW0	290 aa		11.6	□□□□□ -0.55
DDR1-231	ENST00000417521	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	11.6	□□□□□ -0.55
DDR1-231	ENST00000417521	PCLO	Q9Y6V0	5065 aa		11.6	□□□□□ -0.55
DDR1-231	ENST00000417521	TRBV7-9	A0A0J9YWB2	115 aa		11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	C7orf71	A4D174	169 aa		11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	RBFOX3	A6NFN3	312 aa		11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	HTN3	P15516	51 aa		11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	AKR1C3	P42330	323 aa		11.59	□□□□□ -0.55
DDR1-231	ENST00000417521		Q6ZQT7	251 aa		11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	RNASE8	Q8TDE3	154 aa	Known RBP	11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	TMEM263	Q8WUH6	116 aa	Known RBP	11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	TREM1	Q9NP99	234 aa		11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	KLF12	Q9Y4X4	402 aa		11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	LENEP	Q9Y5L5	61 aa		11.59	□□□□□ -0.55
DDR1-231	ENST00000417521	DEFB130B	P0DP73	79 aa		11.58	□□□□□ -0.56
DDR1-231	ENST00000417521	DEFB130A	P0DP74	79 aa		11.58	□□□□□ -0.56
DDR1-231	ENST00000417521		Q86TA4	180 aa		11.58	□□□□□ -0.56
DDR1-231	ENST00000417521	C8orf49	Q96NF6	230 aa		11.58	□□□□□ -0.56
DDR1-231	ENST00000417521	TXNDC17	Q9BRA2	123 aa		11.58	□□□□□ -0.56
DDR1-231	ENST00000417521	RYR1	P21817	5038 aa		11.58	□□□□□ -0.56
DDR1-231	ENST00000417521	TAGLN2	P37802	199 aa	Known RBP	11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	UBE2G1	P62253	170 aa		11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	TOR2A	Q5JU69	321 aa		11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	C11orf52	Q96A22	123 aa		11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	FMC1	Q96HJ9	113 aa		11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	PYGO2	Q9BRQ0	406 aa		11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	FBLL1	A6NHQ2	334 aa	Known RBP	11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	CBY3	A6NI87	242 aa		11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	ZNF324	O75467	553 aa	Predicted RBP	11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	TMEM183B	Q1AE95	376 aa		11.57	□□□□□ -0.56
DDR1-231	ENST00000417521	ZNF506	Q5JVG8	444 aa		11.57	□□□□□ -0.56

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